FFCP PHASE1:Hg19::chr10:75673436..75673452,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9052 | |||
|TSSclassifier=weak | |||
|UniProt=Q59GZ8 | |||
|association_with_transcript=89bp_to_AB208961_5end | |||
|coexpression_cluster_id=C3047 | |||
|description=CAGE_peak_2_at_PLAU_5end | |||
|id=chr10:75673436..75673452,+ | |||
|ontology_enrichment_celltype=CL:0002321!2.74e-18!248;CL:0000220!5.90e-18!246;CL:0000066!1.52e-10!254;CL:0000548!1.88e-10!679;CL:0000004!1.88e-10!679;CL:0000255!1.88e-10!679;CL:0000144!3.63e-10!625;CL:0000012!4.78e-10!682;CL:0002371!1.90e-09!591;CL:0000183!3.30e-09!59;CL:1000449!3.54e-09!16;CL:0002076!4.14e-09!43;CL:0000680!7.01e-09!57;CL:0000056!7.01e-09!57;CL:0000355!7.01e-09!57;CL:1000497!1.30e-08!18;CL:0002518!1.30e-08!18;CL:0000187!1.62e-08!54;CL:0000393!6.46e-08!60;CL:0000211!6.46e-08!60;CL:0002681!4.08e-07!13;CL:0002584!4.08e-07!13;CL:0000222!4.15e-07!119;CL:1000507!4.40e-07!12;CL:1000494!4.40e-07!12;CL:0000192!9.54e-07!42;CL:0000514!9.54e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.05e-12;15!CL:1000497;1.21e-10;17!CL:0002518;1.21e-10;17!CL:1000507;1.60e-08;10!CL:1000494;1.60e-08;10!CL:0002681;1.83e-08;12!CL:0002584;1.83e-08;12!CL:0000244;1.20e-07;4!CL:0000731;1.20e-07;4!CL:0002159;2.26e-07;14!CL:0000135;9.92e-07;3!CL:0000388;9.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.01e-12,15;CL:1000497,1.19e-10,17;CL:0002518,1.19e-10,17;CL:0002321,3.71e-10,250;CL:1000507,7.94e-09,10;CL:1000494,7.94e-09,10;CL:0002681,2.61e-08,12;CL:0002584,2.61e-08,12;CL:0000244,8.35e-08,4;CL:0000731,8.35e-08,4;CL:0002159,1.67e-07,14;CL:0000192,1.81e-07,43;CL:0000514,1.81e-07,43;CL:0000066,8.41e-07,253;CL:0000135,8.78e-07,3;CL:0002166,8.78e-07,3;CL:0000388,8.78e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.31e-14!143;UBERON:0000486!2.30e-12!82;UBERON:0002100!3.76e-12!216;UBERON:0001008!3.20e-11!45;UBERON:0006554!7.74e-11!44;UBERON:0003104!8.13e-11!238;UBERON:0009142!8.13e-11!238;UBERON:0000914!9.72e-11!83;UBERON:0002329!9.72e-11!83;UBERON:0003077!9.72e-11!83;UBERON:0003059!9.72e-11!83;UBERON:0007282!9.72e-11!83;UBERON:0009618!9.72e-11!83;UBERON:0007285!9.72e-11!83;UBERON:0000481!2.79e-10!347;UBERON:0003064!3.79e-10!37;UBERON:0000922!9.37e-10!612;UBERON:0004211!3.54e-09!16;UBERON:0001285!3.54e-09!16;UBERON:0007684!3.54e-09!16;UBERON:0003220!3.54e-09!16;UBERON:0004208!3.54e-09!16;UBERON:0002050!5.82e-09!605;UBERON:0005423!5.82e-09!605;UBERON:0000923!9.48e-09!604;UBERON:0005291!9.48e-09!604;UBERON:0006598!9.48e-09!604;UBERON:0002532!9.48e-09!604;UBERON:0000080!1.39e-08!18;UBERON:0002120!1.39e-08!18;UBERON:0004875!1.39e-08!18;UBERON:0005721!1.39e-08!18;UBERON:0005754!1.39e-08!18;UBERON:0007297!1.39e-08!18;UBERON:0003887!1.48e-08!21;UBERON:0006555!2.72e-08!17;UBERON:0005103!2.72e-08!17;UBERON:0000083!2.72e-08!17;UBERON:0009201!2.72e-08!17;UBERON:0004819!2.72e-08!17;UBERON:0006553!2.72e-08!17;UBERON:0003074!2.72e-08!17;UBERON:0003060!2.72e-08!17;UBERON:0003886!2.79e-08!63;UBERON:0004290!3.04e-08!70;UBERON:0000483!3.92e-08!309;UBERON:0000119!4.99e-08!312;UBERON:0001134!1.70e-07!61;UBERON:0002036!1.70e-07!61;UBERON:0003082!1.70e-07!61;UBERON:0000490!1.89e-07!138;UBERON:0002385!2.32e-07!63;UBERON:0001015!2.32e-07!63;UBERON:0000383!2.32e-07!63;UBERON:0002553!2.43e-07!70;UBERON:0000058!3.17e-07!26;UBERON:0004876!3.98e-07!20;UBERON:0001225!4.08e-07!13;UBERON:0008987!4.08e-07!13;UBERON:0000475!4.20e-07!365;UBERON:0009773!4.40e-07!12;UBERON:0001231!4.40e-07!12;UBERON:0004810!4.40e-07!12;UBERON:0000464!4.87e-07!104;UBERON:0000926!5.60e-07!448;UBERON:0004120!5.60e-07!448;UBERON:0006603!5.60e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.05e-12;15!UBERON:0004819;2.05e-12;15!UBERON:0001285;2.05e-12;15!UBERON:0007684;2.05e-12;15!UBERON:0006554;6.18e-10;30!UBERON:0001008;6.18e-10;30!UBERON:0004211;1.60e-08;10!UBERON:0009773;1.60e-08;10!UBERON:0001231;1.60e-08;10!UBERON:0004810;1.60e-08;10!UBERON:0001225;1.83e-08;12!UBERON:0008987;1.83e-08;12!UBERON:0010371;5.89e-08;31!UBERON:0000488;1.00e-07;4!UBERON:0002113;8.15e-07;24!UBERON:0011143;8.15e-07;24!UBERON:0007846;9.92e-07;3!UBERON:0000043;9.92e-07;3!UBERON:0007845;9.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.01e-12,15;UBERON:0009773,2.01e-12,15;UBERON:0001231,2.01e-12,15;UBERON:0001285,2.01e-12,15;UBERON:0007684,2.01e-12,15;UBERON:0004208,2.01e-12,15;UBERON:0006555,1.76e-11,16;UBERON:0004819,1.76e-11,16;UBERON:0006554,3.64e-10,47;UBERON:0001008,7.60e-10,48;UBERON:0000486,5.77e-09,83;UBERON:0004810,7.94e-09,10;UBERON:0000483,8.43e-09,306;UBERON:0000119,1.45e-08,309;UBERON:0001225,2.61e-08,12;UBERON:0008987,2.61e-08,12;UBERON:0000488,7.91e-08,4;UBERON:0007503,4.49e-07,78;UBERON:0007846,8.78e-07,3;UBERON:0000043,8.78e-07,3;UBERON:0007845,8.78e-07,3;UBERON:0001637,9.10e-07,42;UBERON:0003509,9.10e-07,42;UBERON:0004572,9.10e-07,42 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0.491467873003018,0.697801167972428,0,0,0.866364470720326,5.63375538737457,1.34465029290355,4.82155622419182,3.65155045193687,1.46379839637152,0.492484232307152,3.4680117511523,5.32873026512749,0.286235987131057,0.821246550437305,2.88748071068046,0.152826811495903,0,0,0,0,0,0.919421224478927,2.71085326900425,1.84877005083394,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0.449446968890169,0.918251677112708,0,1.27867425159808,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,1.44846518960824,0,0.486634870302636,1.79616152611729,6.20842312895179,1.31752178539689,0.0654895377488563,0.364295288292542,1.48313777113772,0.324547393654683,0,1.46253756570752,0,0,0,0.198762407366705,0.860234595106124,0,0,1.67799774483962,1.10047216776027,0.835979866147242,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0.298897361103602,0.23486899728753,0.323745888736263,0.421352420106746,0.408308342509787,3.0708579327942,0.309977343527296,0,0,0,1.43723628363248,0.168336113954066,1.00094815897571,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,1.54608682530637,0.545492241181669,0.860413786167011,0.243947412259191,0.132529768321485,0.348581828608555,0.621966330092223,0.756962552626885,0.36497735907583,0,3.21620469096443,1.38134921352481,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,2.57351715447788,1.31700342490351,0,4.52380375852339,1.48141512253647,0.325808305310325,0,33.1962086658129,0.34779121492523,0,0,0,0,0,0,0,0,1.48631162288728,1.87467667973554,5.20744597416465,4.82035330624114,0.268675568108545,1.74380363108377,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.36669142910475,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0.325736184293735,1.06617584622764,0.791951872933429,0,0,0,3.64871341923571,0,6.32501818449095,0.958499421966331,0,2.85273810081437,0.868687840005475,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.542530047399471,0.207970861530807,0.535286966391485,0.157702415033935,0.819989904948992,0.300946099727719,0,0,0,0,0.868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,2.62156479464514,1.59805552781814,0.328508624055237,4.15403543346897,3.25389059687886,0,5.01266175758212,0.184161977871793,1.14814448164607,5.46273504020151,1.44236856455367,1.80479845162965,3.54270550680308,1.56869953835371,5.84556898613043,1.68882606228601,1.13733384070897,1.02056223165909,1.0795795805107,1.54227252690289,0,0.501689773854853,0.254876273045038,13.2972161428596,3.58199607555485,0,0,0.769350375349168,0,0,0,0,0,0.574265537996172,2.60024098414608,0,0.580024309752732,0.308097234229289,0.460511024178389,0.964856007391714,0.214840489736547,1.0151168573996,0.0852266274161009,0.178064071293475,1.15699440752685,1.53752053892085,0,0.2023155617111,0,0,0,0,0,0.869932992075073,0.55597265731176,0.143124886741991,0.372158369359667,0,0,0,0.855877976067841,0.636406495851874,0,0.539617372749944,1.92175920815238,1.41374882814824,0.202182481573316,1.58510321173008,1.26377536871694,0.975267478179181,1.70599442741899,4.22600587027022,0.409499734223957,1.41405431953713,1.13008116620243,0,3.3171948762061,0.438450885253763,0,0,0.202910376962704,2.16876448669825,1.40847801266121,0,0,1.07001315444375,1.06428319221179,1.26664581178598,4.61012850143863,0,0,0.384888450902048,0,6.53345909167936,0.0941438007767792,1.29151611801369,3.36942951335251,3.99087138183008,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0.561594356226918,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0.762760950878299,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.49491290376122,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,1.20990716048664,0,0.063186579628488,0,0,0.664653872707185,5.29587129400798,1.88359751044335,2.38944859545918,0.284609546029793,0.138674673013139,0.867798691675654,0,0,0,0.859930162358083,0,0,0,0.0969890164884194,0,0,1.37041924646751,0,0,0,0,0,0.599428828746391,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0,0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| |||
|short_description=p2@PLAU | |||
}} |
Revision as of 03:33, 11 January 2014
Short description: | p2@PLAU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLAU_5end |
Coexpression cluster: | C3047_Lens_papillary_normal_clear_mesenchymal_Renal_oral |
Association with transcript: | 89bp_to_AB208961_5end |
EntrezGene: | PLAU |
HGNC: | 9052 |
UniProt: | Q59GZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.01e-12 | 15 |
kidney cell | 1.19e-10 | 17 |
kidney epithelial cell | 1.19e-10 | 17 |
embryonic cell | 3.71e-10 | 250 |
kidney tubule cell | 7.94e-09 | 10 |
nephron tubule epithelial cell | 7.94e-09 | 10 |
kidney cortical cell | 2.61e-08 | 12 |
renal cortical epithelial cell | 2.61e-08 | 12 |
transitional epithelial cell | 8.35e-08 | 4 |
urothelial cell | 8.35e-08 | 4 |
general ecto-epithelial cell | 1.67e-07 | 14 |
smooth muscle cell | 1.81e-07 | 43 |
smooth muscle myoblast | 1.81e-07 | 43 |
epithelial cell | 8.41e-07 | 253 |
fibrocyte | 8.78e-07 | 3 |
epithelial cell of Malassez | 8.78e-07 | 3 |
tendon cell | 8.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.01e-12 | 15 |
renal tubule | 2.01e-12 | 15 |
nephron tubule | 2.01e-12 | 15 |
nephron | 2.01e-12 | 15 |
uriniferous tubule | 2.01e-12 | 15 |
nephrogenic mesenchyme | 2.01e-12 | 15 |
excretory tube | 1.76e-11 | 16 |
kidney epithelium | 1.76e-11 | 16 |
urinary system structure | 3.64e-10 | 47 |
renal system | 7.60e-10 | 48 |
multilaminar epithelium | 5.77e-09 | 83 |
nephron tubule epithelium | 7.94e-09 | 10 |
epithelium | 8.43e-09 | 306 |
cell layer | 1.45e-08 | 309 |
cortex of kidney | 2.61e-08 | 12 |
renal parenchyma | 2.61e-08 | 12 |
atypical epithelium | 7.91e-08 | 4 |
epithelial vesicle | 4.49e-07 | 78 |
dense regular connective tissue | 8.78e-07 | 3 |
tendon | 8.78e-07 | 3 |
regular connective tissue | 8.78e-07 | 3 |
artery | 9.10e-07 | 42 |
arterial blood vessel | 9.10e-07 | 42 |
arterial system | 9.10e-07 | 42 |