FFCP PHASE1:Hg19::chr10:76995654..76995663,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118881 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26309 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=19bp_to_ENST00000469299_5end | |||
|description=CAGE_peak_6_at_COMTD1_5end | |||
|id=chr10:76995654..76995663,- | |||
|ontology_enrichment_celltype=CL:0000066!9.44e-23!254;CL:0002076!1.74e-07!43;CL:0000223!6.52e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.15e-15;3!CL:0000149;1.50e-11;4!CL:0000575;9.96e-11;2!CL:1000497;4.27e-07;17!CL:0002518;4.27e-07;17!CL:1000746;5.24e-07;7!CL:1000612;5.24e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.41e-15,3;CL:0000149,8.25e-12,4;CL:0000575,1.64e-10,2;CL:1000497,4.52e-07,17;CL:0002518,4.52e-07,17;CL:1000746,6.73e-07,7;CL:1000612,6.73e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.34e-14!106;DOID:0050687!7.64e-13!143;DOID:162!2.04e-07!235;DOID:14566!2.93e-07!239;DOID:1749!8.72e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.58e-11!169;UBERON:0000925!9.58e-11!169;UBERON:0006595!9.58e-11!169;UBERON:0001007!2.28e-09!155;UBERON:0001555!2.28e-09!155;UBERON:0007026!2.28e-09!155;UBERON:0004921!2.82e-09!129;UBERON:0004185!2.82e-09!129;UBERON:0006554!1.56e-07!44;UBERON:0000161!1.99e-07!35;UBERON:0000020!2.44e-07!23;UBERON:0001004!3.13e-07!72;UBERON:0001444!3.82e-07!48;UBERON:0001008!3.82e-07!45;UBERON:0000063!4.61e-07!97;UBERON:0001032!9.23e-07!24;UBERON:0004456!9.23e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;3.15e-15;3!UBERON:0001782;3.15e-15;3!UBERON:0001456;9.35e-14;21!UBERON:0000019;1.15e-11;19!UBERON:0000047;1.15e-11;19!UBERON:0004088;1.15e-11;19!UBERON:0010230;1.15e-11;19!UBERON:0000964;1.50e-11;4!UBERON:0010409;1.50e-11;4!UBERON:0000970;4.87e-11;20!UBERON:0002104;1.80e-10;21!UBERON:0000020;1.76e-09;23!UBERON:0000966;2.46e-09;5!UBERON:0005388;2.46e-09;5!UBERON:0001802;2.46e-09;5!UBERON:0001032;4.76e-09;24!UBERON:0004456;4.76e-09;24!UBERON:0006554;2.84e-07;30!UBERON:0001008;2.84e-07;30!UBERON:0007625;3.05e-07;11!UBERON:0000074;5.24e-07;7!UBERON:0001229;5.24e-07;7!UBERON:0002113;5.59e-07;24!UBERON:0011143;5.59e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.41e-15,3;UBERON:0005424,1.41e-15,3;UBERON:0001456,5.78e-13,22;UBERON:0001781,8.25e-12,4;UBERON:0000964,3.41e-11,4;UBERON:0010409,3.41e-11,4;UBERON:0004348,3.41e-11,4;UBERON:0005427,3.41e-11,4;UBERON:0000019,6.19e-11,20;UBERON:0000047,6.19e-11,20;UBERON:0010312,6.19e-11,20;UBERON:0004088,6.19e-11,20;UBERON:0010230,6.19e-11,20;UBERON:0003072,6.19e-11,20;UBERON:0004128,6.19e-11,20;UBERON:0003071,6.19e-11,20;UBERON:0000970,2.26e-10,21;UBERON:0002104,2.26e-10,21;UBERON:0000020,5.79e-09,24;UBERON:0001032,5.79e-09,24;UBERON:0004456,5.79e-09,24;UBERON:0001444,4.14e-08,49;UBERON:0000966,5.06e-08,6;UBERON:0005388,5.06e-08,6;UBERON:0001802,5.06e-08,6;UBERON:0007625,2.67e-07,11;UBERON:0010532,6.73e-07,7;UBERON:0000074,6.73e-07,7;UBERON:0001229,6.73e-07,7;UBERON:0001230,6.73e-07,7;UBERON:0003220,6.73e-07,7;UBERON:0005749,6.73e-07,7;UBERON:0004199,6.73e-07,7;UBERON:0004209,6.73e-07,7;UBERON:0004198,6.73e-07,7;UBERON:0000033,7.06e-07,56;UBERON:0005085,9.69e-07,31 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.491467873003018,4.18680700783456,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0.6024118375565,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.263504357079378,0.0654895377488563,1.09288586487763,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0.872188104285069,0,0,0.397227542439656,0,0.709336764396714,0,0,1.97334038733728,0,0,0,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0.57978255948989,0.818238361772504,0,0.121973706129595,0.397589304964456,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.337169380156203,0.964044119533928,0.55146986366197,0.653638332277218,0,1.21348177344148,0.392442930250692,0,0,0,0.8231480226628,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0.658501712451753,0,0.100528972411631,0.277765335475589,0,1.03993478527958,0,0.231860809950154,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0.425325291727159,0.447792613514241,0.581267877027924,0.766765358330422,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,2.83698264046557,0.266422179016099,0.285955987316295,0,0,0,0,0,0.301439377059586,0.871533458600294,0.599837947092342,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.35142424497814,0,0,1.03473071292505,0.664225598535437,0,0,0,0.343143423810856,0.206768026122887,0,0,0.606255142892519,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0.232420756919918,0.604297247958111,0.200506470303285,0.736647911487171,0.114814448164607,0,0.131124414959424,0.451199612907412,0.385076685522074,1.56869953835371,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,1.79515087581472,1.31205858279882,1.62689197332152,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0.770243085573222,0,0,0.107420244868274,0,0,0,0.330569830721956,0.192190067365106,0.638063562472921,0.4046311234222,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0.0962221127255121,0,2.17781969722645,0,0.86101074534246,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,1.71528151186722,0,0.144269212976445,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.561421621224659,0.146508179271894,0,0,0,1.19372242368845,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0.503865495708552,0,0.246169610922139,0,0.0898683511473268,2.14825409610731,0,0,0,0,0.969332746095218,0.0927680981618513,0,1.30213880542617,0.699679999969566,1.44999915086959,0.682760689712998,0.508507300585533,0.236387681767936,0.689486746482929,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0.653630781113941,0.278847488557207,0.384751292518985,0,0,0.0897576444097721,0,0.31900115973192,0,0,0,0,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0.216388639742091,0,0.884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,0,0.978323094660449,0,0.394584402849391,2.41981432097328,0,0,3.15679180770434,0.829505531177977,0,0,0,0,0.569219092059585,0,0.173559738335131,0.881931576729399,0.522355239482415,0.17472666824203,0.171986032471617,0.19351266257817,0.292357268344742,0.164230914106418,1.55182426381471,0,0.451961481561065,0.274083849293502,0,0.0633107959558787,0,0,0.426905989478705,0.19980960958213,0,0.114536596165916,0.686379991447858,0.14405479798815,0,0.942776138467182,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.262887354279314,0.279282401272254,0.458320848023367,0,0.399358000997982,0.858452096273142,0,0.335917362433631,0,0,0,0.164831716762333,0.0674035438541849,0.196854963029498,0.338693328263138,0,0,0.803765742325096,0.275078873194468,0.415440338029185,0,0,0.0607495566580247,1.0063040627978,0.0788057072991982,0.262272940674991,0,0.179287339332845,0,2.1440859791201,0.662091970365432,0,0,0,0.326587360109409,1.19730191562487,0,0,0.453248366080503,0.293104467356165,0,0.12928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| |||
|short_description=p6@COMTD1 | |||
}} |
Revision as of 03:36, 11 January 2014
Short description: | p6@COMTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_COMTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000469299_5end |
EntrezGene: | COMTD1 |
HGNC: | 26309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.41e-15 | 3 |
visual pigment cell | 8.25e-12 | 4 |
corneal epithelial cell | 1.64e-10 | 2 |
kidney cell | 4.52e-07 | 17 |
kidney epithelial cell | 4.52e-07 | 17 |
glomerular cell | 6.73e-07 | 7 |
kidney corpuscule cell | 6.73e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.41e-15 | 3 |
presumptive retinal pigmented epithelium | 1.41e-15 | 3 |
face | 5.78e-13 | 22 |
layer of retina | 8.25e-12 | 4 |
cornea | 3.41e-11 | 4 |
eye surface | 3.41e-11 | 4 |
optic eminence | 3.41e-11 | 4 |
corneal primordium | 3.41e-11 | 4 |
camera-type eye | 6.19e-11 | 20 |
simple eye | 6.19e-11 | 20 |
immature eye | 6.19e-11 | 20 |
ocular region | 6.19e-11 | 20 |
eyeball of camera-type eye | 6.19e-11 | 20 |
optic cup | 6.19e-11 | 20 |
optic vesicle | 6.19e-11 | 20 |
eye primordium | 6.19e-11 | 20 |
eye | 2.26e-10 | 21 |
visual system | 2.26e-10 | 21 |
sense organ | 5.79e-09 | 24 |
sensory system | 5.79e-09 | 24 |
entire sense organ system | 5.79e-09 | 24 |
subdivision of head | 4.14e-08 | 49 |
retina | 5.06e-08 | 6 |
photoreceptor array | 5.06e-08 | 6 |
posterior segment of eyeball | 5.06e-08 | 6 |
pigment epithelium of eye | 2.67e-07 | 11 |
primitive nephron | 6.73e-07 | 7 |
renal glomerulus | 6.73e-07 | 7 |
renal corpuscle | 6.73e-07 | 7 |
glomerular capsule | 6.73e-07 | 7 |
metanephric mesenchyme | 6.73e-07 | 7 |
glomerular tuft | 6.73e-07 | 7 |
S-shaped body | 6.73e-07 | 7 |
renal vesicle | 6.73e-07 | 7 |
comma-shaped body | 6.73e-07 | 7 |
head | 7.06e-07 | 56 |
ectodermal placode | 9.69e-07 | 31 |