FFCP PHASE1:Hg19::chr10:123260431..123260442,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:123260431..123260442,- | |||
|id=chr10:123260431..123260442,- | |||
|ontology_enrichment_celltype=CL:0002231!2.42e-07!3;CL:0000540!9.84e-07!6;CL:0000031!9.84e-07!6;CL:0000404!9.84e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002178;5.96e-34;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,5.96e-34,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;9.37e-99;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.52e-50;2!DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.52e-50,2;DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-26!82;UBERON:0005743!1.37e-26!86;UBERON:0001049!3.55e-26!57;UBERON:0005068!3.55e-26!57;UBERON:0006241!3.55e-26!57;UBERON:0007135!3.55e-26!57;UBERON:0000073!4.00e-23!94;UBERON:0001016!4.00e-23!94;UBERON:0002616!4.30e-23!59;UBERON:0007023!1.04e-21!115;UBERON:0000955!1.38e-21!69;UBERON:0006238!1.38e-21!69;UBERON:0002020!1.68e-17!34;UBERON:0003528!1.68e-17!34;UBERON:0002780!1.91e-17!41;UBERON:0001890!1.91e-17!41;UBERON:0006240!1.91e-17!41;UBERON:0001893!2.13e-17!34;UBERON:0003075!3.49e-17!86;UBERON:0007284!3.49e-17!86;UBERON:0003080!6.59e-17!42;UBERON:0001869!9.00e-17!32;UBERON:0002346!4.75e-16!90;UBERON:0002791!5.19e-16!33;UBERON:0000033!2.44e-15!123;UBERON:0000153!2.95e-15!129;UBERON:0007811!2.95e-15!129;UBERON:0004121!1.93e-13!169;UBERON:0002619!4.54e-13!22;UBERON:0000924!7.01e-13!173;UBERON:0006601!7.01e-13!173;UBERON:0003056!1.82e-12!61;UBERON:0001950!3.40e-12!20;UBERON:0000956!3.30e-11!25;UBERON:0000203!3.30e-11!25;UBERON:0003076!8.41e-11!15;UBERON:0003057!8.41e-11!15;UBERON:0000200!2.20e-09!6;UBERON:0004733!2.37e-08!12;UBERON:0002028!2.37e-08!12;UBERON:0007277!2.37e-08!12;UBERON:0002308!3.48e-08!9;UBERON:0000125!3.48e-08!9;UBERON:0002771!1.12e-07!3;UBERON:0004732!1.26e-07!13;UBERON:0000988!3.76e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.15e-21;5!UBERON:0010039;5.15e-21;5!UBERON:0002331;2.73e-11;10!UBERON:0001041;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8;UBERON:0002331,2.73e-11,10;UBERON:0000358,2.73e-11,10;UBERON:0000307,2.73e-11,10;UBERON:0000091,2.73e-11,10;UBERON:0000087,2.73e-11,10;UBERON:0007010,2.73e-11,10;UBERON:0007806,2.73e-11,10;UBERON:0008780,2.73e-11,10;UBERON:0005728,2.73e-11,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0.552896299656123,0.295547618953547,0,0,0.278847488557207,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0.550285795565037,0.115525666150338,0,0,0,0,0,0.781514011233092,0,0,0,0.135075169236789,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.68732060563215,0,0,0,1.96300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0.462175628631418,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr10:123260431..123260442,- | |||
}} |
Revision as of 05:19, 11 January 2014
Short description: | p@chr10:123260431..123260442, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:123260431..123260442, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 5.96e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
umbilical cord | 2.73e-11 | 10 |
blastocyst | 2.73e-11 | 10 |
blastula | 2.73e-11 | 10 |
bilaminar disc | 2.73e-11 | 10 |
inner cell mass | 2.73e-11 | 10 |
cleaving embryo | 2.73e-11 | 10 |
connecting stalk | 2.73e-11 | 10 |
inner cell mass derived epiblast | 2.73e-11 | 10 |
extraembryonic mesoderm | 2.73e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.52e-50 | 2 |
gastrointestinal system cancer | 2.00e-08 | 14 |