FFCP PHASE1:Hg19::chr10:135043750..135043761,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8433 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12634 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T230 | |||
|association_with_transcript=-16bp_to_ENST00000304477,NM_003577,uc001lmc.2_5end | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_6_at_UTF1_5end | |||
|id=chr10:135043750..135043761,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.22e-29!5;CL:0000039!5.90e-14!7;CL:0000586!5.90e-14!7;CL:0000540!4.27e-09!6;CL:0000031!4.27e-09!6;CL:0000404!4.27e-09!6;CL:0000047!6.30e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.85e-89;5!CL:0000039;5.82e-42;7!CL:0000586;5.82e-42;7!CL:0002321;6.19e-30;15!CL:0000148;8.12e-17;10!CL:0000147;3.32e-12;14!CL:0000710;1.00e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.82e-89,5;CL:0000039,5.82e-42,7;CL:0000586,5.82e-42,7;CL:0000148,8.12e-17,10;CL:0000541,8.12e-17,10;CL:0000147,3.32e-12,14;CL:0000710,1.00e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.49e-64;10!UBERON:0005564;1.49e-64;10 | |||
|ontology_enrichment_disease=DOID:3371!4.78e-07!1;DOID:4549!4.78e-07!1;DOID:5861!4.78e-07!1;DOID:6496!4.78e-07!1;DOID:225!6.38e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.14e-13;22!DOID:2994;1.14e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.14e-13,22;DOID:2994,1.14e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.70e-26!8;UBERON:0003135!5.69e-19!11;UBERON:0000991!1.41e-16!21;UBERON:0009196!1.41e-16!21;UBERON:0009117!1.41e-16!21;UBERON:0005564!1.41e-16!21;UBERON:0004176!9.10e-16!22;UBERON:0003101!3.54e-09!22;UBERON:0000079!3.54e-09!22;UBERON:0002323!1.28e-08!46;UBERON:0004458!5.33e-08!49;UBERON:0002135!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.25e-80;8!UBERON:0003135;1.05e-58;11!UBERON:0000991;8.23e-31;21!UBERON:0003101;2.06e-29;22!UBERON:0000079;2.06e-29;22!UBERON:0000922;2.86e-18;49!UBERON:0002323;8.80e-12;45!UBERON:0003133;9.99e-11;44!UBERON:0002553;5.49e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.09e-80,8;UBERON:0003135,9.53e-59,11;UBERON:0000991,7.82e-31,21;UBERON:0009196,7.82e-31,21;UBERON:0009117,7.82e-31,21;UBERON:0005564,7.82e-31,21;UBERON:0004176,1.96e-29,22;UBERON:0003101,1.96e-29,22;UBERON:0000079,1.96e-29,22;UBERON:0002323,4.63e-14,46;UBERON:0003133,1.80e-13,48;UBERON:0004458,3.41e-13,49;UBERON:0003886,5.84e-12,54;UBERON:0005156,6.19e-11,59;UBERON:0000990,6.19e-11,59;UBERON:0002553,1.43e-10,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61079048196139,1.32529768321485,2.5562667431294,3.21349270547648,2.52320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794305140223502,0,0,0,0,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.964518890790115,0.962776056180637,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977734268540344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,4.4875085086472,17.1019139369959,10.4760185469723,19.8058956040976,1.97024615367422,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@UTF1 | |||
}} |
Revision as of 05:41, 11 January 2014
Short description: | p6@UTF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_UTF1_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -16bp_to_ENST00000304477, NM_003577, uc001lmc.2_5end |
EntrezGene: | UTF1 |
HGNC: | 12634 |
UniProt: | Q5T230 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.82e-89 | 5 |
germ line cell | 5.82e-42 | 7 |
germ cell | 5.82e-42 | 7 |
melanocyte | 8.12e-17 | 10 |
melanoblast | 8.12e-17 | 10 |
pigment cell | 3.32e-12 | 14 |
neurecto-epithelial cell | 1.00e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 1.09e-80 | 8 |
male reproductive organ | 9.53e-59 | 11 |
gonad | 7.82e-31 | 21 |
indifferent external genitalia | 7.82e-31 | 21 |
indifferent gonad | 7.82e-31 | 21 |
gonad primordium | 7.82e-31 | 21 |
external genitalia | 1.96e-29 | 22 |
male organism | 1.96e-29 | 22 |
male reproductive system | 1.96e-29 | 22 |
body cavity | 4.63e-14 | 46 |
reproductive organ | 1.80e-13 | 48 |
body cavity or lining | 3.41e-13 | 49 |
body cavity precursor | 5.84e-12 | 54 |
reproductive structure | 6.19e-11 | 59 |
reproductive system | 6.19e-11 | 59 |
anatomical cavity | 1.43e-10 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.14e-13 | 22 |
germ cell cancer | 1.14e-13 | 22 |