FFCP PHASE1:Hg19::chr10:135044555..135044569,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_at_chr10:135044555..135044569,+ | |||
|id=chr10:135044555..135044569,+ | |||
|ontology_enrichment_celltype=CL:0002322!7.87e-41!5;CL:0000039!2.29e-19!7;CL:0000586!2.29e-19!7;CL:0000540!1.21e-12!6;CL:0000031!1.21e-12!6;CL:0000404!1.21e-12!6;CL:0000047!1.30e-09!8;CL:0000148!5.46e-08!10;CL:0000541!5.46e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.76e-63;5!CL:0000039;7.48e-46;7!CL:0000586;7.48e-46;7!CL:0002321;1.71e-21;15!CL:0000148;1.89e-18;10!CL:0000147;2.20e-13;14!CL:0000710;1.46e-09;20!CL:0000075;3.12e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.99e-63,5;CL:0000039,7.06e-46,7;CL:0000586,7.06e-46,7;CL:0000148,1.94e-18,10;CL:0000541,1.94e-18,10;CL:0000147,2.25e-13,14;CL:0000710,1.49e-09,20;CL:0000075,3.16e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.39e-49;10!UBERON:0005564;1.39e-49;10 | |||
|ontology_enrichment_disease=DOID:3095!6.22e-13!22;DOID:2994!6.22e-13!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.09e-15;22!DOID:2994;6.09e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.98e-15,22;DOID:2994,5.98e-15,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.22e-26!8;UBERON:0003135!8.66e-19!11;UBERON:0000991!1.22e-13!21;UBERON:0009196!1.22e-13!21;UBERON:0009117!1.22e-13!21;UBERON:0005564!1.22e-13!21;UBERON:0004176!5.36e-13!22;UBERON:0003101!2.62e-09!22;UBERON:0000079!2.62e-09!22;UBERON:0002370!1.37e-08!4;UBERON:0005058!1.37e-08!4;UBERON:0009113!1.37e-08!4;UBERON:0003295!1.37e-08!4;UBERON:0005562!1.37e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.27e-62;8!UBERON:0003135;4.08e-45;11!UBERON:0000991;8.55e-24;21!UBERON:0003101;1.00e-22;22!UBERON:0000079;1.00e-22;22!UBERON:0000922;5.72e-18;49!UBERON:0002323;1.59e-10;45!UBERON:0003133;1.29e-08;44!UBERON:0002553;6.08e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.27e-62,8;UBERON:0003135,4.08e-45,11;UBERON:0000991,8.55e-24,21;UBERON:0009196,8.55e-24,21;UBERON:0009117,8.55e-24,21;UBERON:0005564,8.55e-24,21;UBERON:0004176,1.00e-22,22;UBERON:0003101,1.00e-22,22;UBERON:0000079,1.00e-22,22;UBERON:0002323,5.79e-11,46;UBERON:0003133,1.64e-10,48;UBERON:0004458,2.67e-10,49;UBERON:0003886,2.36e-09,54;UBERON:0005156,1.44e-08,59;UBERON:0000990,1.44e-08,59;UBERON:0002553,2.74e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929119112685311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14710600840624,0.397589304964456,2.32387885739037,3.42081481550722,3.02785021050754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803765742325096,0.687697182986169,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.327796715891087,0,5.40540797632503,8.8181743737635,2.57305718697566,7.52122617877125,1.13668047327359,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:135044555..135044569,+ | |||
}} |
Revision as of 05:41, 11 January 2014
Short description: | p@chr10:135044555..135044569, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135044555..135044569, + |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.99e-63 | 5 |
germ line cell | 7.06e-46 | 7 |
germ cell | 7.06e-46 | 7 |
melanocyte | 1.94e-18 | 10 |
melanoblast | 1.94e-18 | 10 |
pigment cell | 2.25e-13 | 14 |
neurecto-epithelial cell | 1.49e-09 | 20 |
columnar/cuboidal epithelial cell | 3.16e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
testis | 7.27e-62 | 8 |
male reproductive organ | 4.08e-45 | 11 |
gonad | 8.55e-24 | 21 |
indifferent external genitalia | 8.55e-24 | 21 |
indifferent gonad | 8.55e-24 | 21 |
gonad primordium | 8.55e-24 | 21 |
external genitalia | 1.00e-22 | 22 |
male organism | 1.00e-22 | 22 |
male reproductive system | 1.00e-22 | 22 |
body cavity | 5.79e-11 | 46 |
reproductive organ | 1.64e-10 | 48 |
body cavity or lining | 2.67e-10 | 49 |
body cavity precursor | 2.36e-09 | 54 |
reproductive structure | 1.44e-08 | 59 |
reproductive system | 1.44e-08 | 59 |
anatomical cavity | 2.74e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.98e-15 | 22 |
germ cell cancer | 5.98e-15 | 22 |