FFCP PHASE1:Hg19::chr11:1213519..1213539,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=429bp_to_uc001lsz.2_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_3_at_uc001lsz.2_5end | |||
|id=chr11:1213519..1213539,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.23e-13;1!UBERON:0009497;1.30e-08;13!UBERON:0006965;4.55e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;2.62e-13;1!DOID:3603;2.62e-13;1!DOID:3493;4.55e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.62e-13,1;DOID:3603,2.62e-13,1;DOID:3493,4.98e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002394!7.84e-11!4;UBERON:0003928!7.84e-11!4;UBERON:0002294!1.10e-10!7;UBERON:0001173!1.10e-10!7;UBERON:0004912!1.10e-10!7;UBERON:0003127!4.81e-10!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.68e-15;7!UBERON:0001173;1.68e-15;7!UBERON:0002171;2.05e-13;1!UBERON:0006518;2.05e-13;1!UBERON:0008949;2.05e-13;1!UBERON:0000101;2.05e-13;1!UBERON:0002167;2.05e-13;1!UBERON:0002394;1.75e-12;4!UBERON:0003928;1.75e-12;4!UBERON:0003127;3.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.32e-13,1;UBERON:0006518,2.32e-13,1;UBERON:0008949,2.32e-13,1;UBERON:0000101,2.32e-13,1;UBERON:0002167,2.32e-13,1;UBERON:0002294,3.69e-12,9;UBERON:0001173,3.69e-12,9;UBERON:0004912,3.69e-12,9;UBERON:0002394,1.36e-08,6;UBERON:0003928,1.36e-08,6;UBERON:0003127,3.09e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,1.25815691606258,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,9.67925728389311,0,0,0,0,6.64653872707185,0,0,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0,0,2.77488893161158,0,0.432271251462318,0,0,3.02515075775114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0.747511887973863,0,9.1132592176383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60723644091057,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.444925607568277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09726132484042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42843150884526,0,0,51.1235471772562,0,0,0,0,0,9.52248312927721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,6.3832762799482,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@uc001lsz.2 | |||
}} |
Revision as of 05:58, 11 January 2014
Short description: | p3@uc001lsz.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc001lsz.2_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 429bp_to_uc001lsz.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.32e-13 | 1 |
right lung lobe | 2.32e-13 | 1 |
lower lobe of lung | 2.32e-13 | 1 |
lobe of lung | 2.32e-13 | 1 |
right lung | 2.32e-13 | 1 |
biliary system | 3.69e-12 | 9 |
biliary tree | 3.69e-12 | 9 |
biliary bud | 3.69e-12 | 9 |
bile duct | 1.36e-08 | 6 |
digestive system duct | 1.36e-08 | 6 |
open tracheal system trachea | 3.09e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.62e-13 | 1 |
mucinous cystadenocarcinoma | 2.62e-13 | 1 |
signet ring cell adenocarcinoma | 4.98e-07 | 2 |