FFCP PHASE1:Hg19::chr11:2154872..2154893,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_uc001lvf.2_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_38_at_IGF2_5end | |||
|id=chr11:2154872..2154893,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.88e-21;19!CL:0000182;3.80e-08;12!CL:0002541;5.28e-08;3!CL:0002537;7.83e-08;5!CL:0002577;9.19e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.77e-21,19;CL:0000182,3.22e-08,12;CL:0002541,4.83e-08,3;CL:0002577,8.15e-08,3;CL:0002537,9.85e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.86e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.37e-14!14;UBERON:0000158!2.37e-14!14;UBERON:0000478!5.05e-10!24;UBERON:0003124!2.74e-08!7;UBERON:0004923!3.99e-08!57;UBERON:0000305!1.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.50e-21;24!UBERON:0005631;3.18e-18;10!UBERON:0000158;3.18e-18;10!UBERON:0000305;5.14e-12;7!UBERON:0002107;2.28e-11;19!UBERON:0006925;2.28e-11;19!UBERON:0001987;8.77e-10;4!UBERON:0002423;4.76e-08;25!UBERON:0003124;5.28e-08;3!UBERON:0000920;5.28e-08;3!UBERON:0000922;1.66e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.09e-26,14;UBERON:0000158,3.09e-26,14;UBERON:0000478,2.48e-21,24;UBERON:0003124,3.52e-16,7;UBERON:0000305,6.74e-12,7;UBERON:0002107,2.16e-11,19;UBERON:0006925,2.16e-11,19;UBERON:0008836,2.16e-11,19;UBERON:0004871,2.71e-10,8;UBERON:0001987,7.97e-10,4;UBERON:0004340,7.97e-10,4;UBERON:0008835,1.70e-09,22;UBERON:0003894,1.70e-09,22;UBERON:0009854,5.63e-09,23;UBERON:0007499,4.59e-08,25;UBERON:0009497,4.59e-08,25;UBERON:0000015,4.59e-08,25;UBERON:0002423,4.59e-08,25;UBERON:0006235,4.59e-08,25;UBERON:0004161,4.59e-08,25;UBERON:0000920,4.83e-08,3;UBERON:0009856,1.16e-07,26 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,1.0007329835313,0.893922188854576,3.48935409640147,0,0,0,0,0,16.1646615376327,16.0897856719357,0.990130823680373,0.331397375727916,0,0,0,0,0.492484232307152,1.83600622119828,1.25381888591235,0,0,0,0,0,0,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0.579386075843295,0,0,0.0945348171640679,0,0.263504357079378,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0.24666754841716,0.622422070799533,0,0,2.4217188423189,4.03323147135999,0,0,0,0,0,0,0,0,0,0,0,2.47266929278557,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0.438977620880838,0,0.751190294532984,0.226864366320042,0,0.427114777637135,0,0,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0,0,1.62671520017326,1.34759371519982,0.252320850875628,0,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,3.80265104465493,1.96565443335525,1.18157981336281,0,9.47010976781974,0,0,0,0.201057944823262,0.555530670951178,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,4.79556075716608,0.22001485746285,0,3.57656445851882,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0.532844358032199,1.00084595560703,21.7048642156577,0,0,0.355391948742546,1.58390374586686,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,1.84928690295345,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20844685094452,2.50085260529839,0.813795071099207,3.11956292296211,2.3195768543631,1.73472656537328,1.40569697991256,0,0,0,0,0.184369168541703,0,23.3003377380661,33.284912109653,0,0,0,2.72814814301633,16.6435439510497,13.0027826131763,0,0.61384789315225,0.280660094433074,0,3.58195074346692,0,4.45254199334973,0,0.177561725313127,0,0,0,8.09758312263869,0.200506470303285,0,0.34444334449382,0.910455840033585,0.655622074797121,0,0.308061348417659,0,0,0,0,0.170093705276516,0.647747748306418,1.54227252690289,0.812839312631559,1.00337954770971,0,0,0.447749509444357,0,0,0,0.328014645699706,0,1.54561517471583,0.0915694648183434,0,0,0,0,0.48335359146061,0.308097234229289,0.460511024178389,1.10269257987624,0,0.580066775656914,0.170453254832202,5.69805028139119,0,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,1.14378116354295,0.255897791311334,0.855877976067841,0,0,0.539617372749944,0.823611089208164,0,0,0,0,1.46290121726877,0,0,0.818999468447914,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.589494246078727,0,0,0,0.658589785919804,0.75894634753143,0.349934720244983,0,0,0,1.7887322147588,2.15252686335615,0,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0.568272293612826,27.2168712600967,13.0664459566361,30.1017488057247,0,0,0,0,0.63337622438398,0.19924798825107,0,0.251932747854276,0,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,0,0,0.221158519862449,0,0.219385397153973,0,0,0.615602068030377,0,0.46112780877612,0,0,37.3231356886346,2.56473261525214,90.6159119231679,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0.176915129006678,2.4441205797345,0,0,0,0.134802265961354,14.4463976513782,0.468528891450678,0,0,0,0,2.41981432097328,0.91821828489147,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,0.0969890164884194,0.0882561266915003,4.51961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,10.1902900886886,0,0,31.4018846087395,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.916641696046735,0.717873024576814,0.798716001995964,1.28767814440971,0.89268582976749,2.14987111957524,0,0,8.50858368918015,9.47782371383414,8.8972677887524,5.70879392785543,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,1.41627387964495,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,1.46552233678082,9.27548222385549,0.129282956361551,0,0,0,0.320362237703084,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0.124980407962107,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0.380805212168795,0,0,0,0,1.19428766609585,2.80019435264208,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0.622077260032973,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0.352675943690684,0.918736432059601,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,1.39241355481392,0.225630985047772,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0.535701835878287,0,0,0,6.38657065171,0,0,0.0679697329768317,0,0,0.111231401892069,0.313972371402056,0,2.5224494698241,3.65263488203798,0,0,0.78624198594322,0,0,12.5177956057857,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0,0,0.487671699929078,0,0.615976841137482,24.3561030581022,4.37139893753226,0,6.56537558032515,0.237840181555137,0,0,0,0.0771741581079447,1.74847648403166,0,0.245148321753905,0.235676547101626,1.76677620403451,0,1.6906229103336,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0.917458566809082,0,0.631086248772738,0.0679914901909147,0,10.580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.103432995861895,0,7.37999737537595,0,0,0,0,1.0105859447911,1.08858373948481,23.9563310759697,0,0.215166616178029,6.65320713092027,0.325613074443898,0,3.8614456457388,2.0659796484515,7.03922827210363,0.244482888365733,3.25516942652591,0,0.603821380773079,0 | |||
|short_description=p38@IGF2 | |||
}} |
Revision as of 06:09, 11 January 2014
Short description: | p38@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 10bp_to_uc001lvf.2_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.77e-21 | 19 |
hepatocyte | 3.22e-08 | 12 |
chorionic membrane mesenchymal stem cell | 4.83e-08 | 3 |
placental epithelial cell | 8.15e-08 | 3 |
amnion mesenchymal stem cell | 9.85e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.09e-26 | 14 |
membranous layer | 3.09e-26 | 14 |
extraembryonic structure | 2.48e-21 | 24 |
chorion | 3.52e-16 | 7 |
amnion | 6.74e-12 | 7 |
liver | 2.16e-11 | 19 |
digestive gland | 2.16e-11 | 19 |
liver bud | 2.16e-11 | 19 |
somatic layer of lateral plate mesoderm | 2.71e-10 | 8 |
placenta | 7.97e-10 | 4 |
allantois | 7.97e-10 | 4 |
hepatic diverticulum | 1.70e-09 | 22 |
liver primordium | 1.70e-09 | 22 |
digestive tract diverticulum | 5.63e-09 | 23 |
epithelial sac | 4.59e-08 | 25 |
epithelium of foregut-midgut junction | 4.59e-08 | 25 |
anatomical boundary | 4.59e-08 | 25 |
hepatobiliary system | 4.59e-08 | 25 |
foregut-midgut junction | 4.59e-08 | 25 |
septum transversum | 4.59e-08 | 25 |
egg chorion | 4.83e-08 | 3 |
sac | 1.16e-07 | 26 |