FFCP PHASE1:Hg19::chr11:85820536..85820567,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC016696_5end | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_1_at_BC016696_5end | |||
|id=chr11:85820536..85820567,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.17e-22!7;CL:0000586!1.17e-22!7;CL:0002541!1.02e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.08e-31;7!CL:0000586;2.08e-31;7!CL:0002541;4.52e-26;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.08e-31,7;CL:0000586,2.08e-31,7;CL:0002541,6.40e-26,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.96e-08;10!UBERON:0005564;1.96e-08;10 | |||
|ontology_enrichment_disease=DOID:1036!5.79e-14!8;DOID:3095!7.03e-09!22;DOID:2994!7.03e-09!22;DOID:162!8.63e-08!235;DOID:14566!1.68e-07!239;DOID:0050687!3.06e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.39e-18;8!DOID:1799;2.84e-10;1!DOID:10165;2.84e-10;1!DOID:1798;2.84e-10;1!DOID:3095;6.32e-10;22!DOID:2994;6.32e-10;22!DOID:0050619;8.61e-10;1!DOID:178;8.61e-10;1!DOID:326;8.61e-10;1!DOID:3978;8.61e-10;1!DOID:3394;8.61e-10;1!DOID:5844;8.61e-10;1!DOID:1357;8.61e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.39e-18,8;DOID:1799,2.84e-10,1;DOID:10165,2.84e-10,1;DOID:1798,2.84e-10,1;DOID:3095,6.32e-10,22;DOID:2994,6.32e-10,22;DOID:178,6.91e-10,1;DOID:326,6.91e-10,1;DOID:3978,6.91e-10,1;DOID:3394,6.91e-10,1;DOID:5844,6.91e-10,1;DOID:0050619,9.82e-10,1;DOID:1357,9.82e-10,1;DOID:162,5.55e-09,235;DOID:14566,9.90e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.02e-13!3;UBERON:0000920!1.02e-13!3;UBERON:0003124!7.06e-10!7;UBERON:0000473!4.82e-09!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.52e-26;3!UBERON:0000920;4.52e-26;3!UBERON:0000473;2.03e-10;8!UBERON:0001764;8.61e-10;1!UBERON:0001825;8.61e-10;1!UBERON:0005631;3.17e-08;10!UBERON:0000158;3.17e-08;10!UBERON:0003135;1.04e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.40e-26,3;UBERON:0003124,1.82e-11,7;UBERON:0000473,2.03e-10,8;UBERON:0001764,9.82e-10,1;UBERON:0001825,9.82e-10,1;UBERON:0003135,1.04e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2118792037015,47.7510668259988,0,2.23300811812344,1.37396390102793,1.06606955203727,0,0,0,103.99959954452,119.990271002457,118.985505165872,18.0266046087976,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,1.59743200399193,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,3.557009374163,0,0,0,0,0,0,1.25643277000187,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46742878817343,0.577628330751691,0,0,0,0,0,0,13.619148113034,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52821778772363,0,0,0,0.414432328326074,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,12.1648521000295,0,0,0,0.329821550236287,1.35866559210006,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,1.60698544745092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.32076010136,3.20660886318673,2.75684698604535,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p1@BC016696 | |||
}} |
Revision as of 09:44, 11 January 2014
Short description: | p1@BC016696 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC016696_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 0bp_to_BC016696_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.08e-31 | 7 |
germ cell | 2.08e-31 | 7 |
chorionic membrane mesenchymal stem cell | 6.40e-26 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.40e-26 | 3 |
chorion | 1.82e-11 | 7 |
testis | 2.03e-10 | 8 |
maxillary sinus | 9.82e-10 | 1 |
paranasal sinus | 9.82e-10 | 1 |
male reproductive organ | 1.04e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.39e-18 | 8 |
islet cell tumor | 2.84e-10 | 1 |
endocrine pancreas cancer | 2.84e-10 | 1 |
pancreatic endocrine carcinoma | 2.84e-10 | 1 |
germ cell and embryonal cancer | 6.32e-10 | 22 |
germ cell cancer | 6.32e-10 | 22 |
vascular disease | 6.91e-10 | 1 |
ischemia | 6.91e-10 | 1 |
extrinsic cardiomyopathy | 6.91e-10 | 1 |
myocardial ischemia | 6.91e-10 | 1 |
myocardial infarction | 6.91e-10 | 1 |
paranasal sinus cancer | 9.82e-10 | 1 |
maxillary sinus cancer | 9.82e-10 | 1 |
cancer | 5.55e-09 | 235 |
disease of cellular proliferation | 9.90e-09 | 239 |