FFCP PHASE1:Hg19::chr11:101000445..101000465,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5241 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8910 | |||
|TSSclassifier=strong | |||
|UniProt=B4E3T0 | |||
|association_with_transcript=0bp_to_ENST00000534013_5end | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_5_at_PGR_5end | |||
|id=chr11:101000445..101000465,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.77e-18;2!UBERON:0010226;2.59e-10;1!UBERON:0005754;3.71e-10;1!UBERON:0006298;7.22e-10;1!UBERON:0005062;1.81e-09;4!UBERON:0007284;1.81e-09;4 | |||
|ontology_enrichment_disease=DOID:5093!3.26e-12!4;DOID:1612!3.26e-12!4;DOID:1036!2.30e-08!8 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.76e-21;4!DOID:1612;6.76e-21;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.24e-21,4;DOID:1612,7.24e-21,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.55e-32!115;UBERON:0006947!1.91e-09!3;UBERON:0004054!1.91e-09!3;UBERON:0000988!4.12e-08!3;UBERON:0005904!3.67e-07!4;UBERON:0000007!6.85e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.33e-18;2!UBERON:0006947;1.63e-12;3!UBERON:0004054;1.63e-12;3!UBERON:0003978;2.52e-12;3!UBERON:0000946;2.52e-12;3!UBERON:0006834;1.65e-10;1!UBERON:0002084;2.59e-10;1!UBERON:0002082;2.59e-10;1!UBERON:0000998;3.71e-10;1!UBERON:0006868;3.71e-10;1!UBERON:0005795;7.22e-10;1!UBERON:0001736;7.22e-10;1!UBERON:0002135;7.22e-10;1!UBERON:0002146;7.22e-10;1!UBERON:0001301;7.22e-10;1!UBERON:0005623;7.22e-10;1!UBERON:0005904;1.31e-09;4!UBERON:0003296;1.81e-09;4!UBERON:0010133;1.81e-09;4!UBERON:0000310;1.11e-08;10!UBERON:0001443;6.22e-08;11!UBERON:0004175;6.00e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,8.24e-18,2;UBERON:0006947,1.50e-12,3;UBERON:0004054,1.50e-12,3;UBERON:0003978,1.78e-12,3;UBERON:0009751,1.78e-12,3;UBERON:0000946,1.78e-12,3;UBERON:0002523,1.78e-12,3;UBERON:0005983,1.78e-12,3;UBERON:0002165,1.78e-12,3;UBERON:0002062,1.78e-12,3;UBERON:0007280,1.78e-12,3;UBERON:0006834,1.65e-10,1;UBERON:0002084,2.59e-10,1;UBERON:0002082,2.59e-10,1;UBERON:0010226,2.59e-10,1;UBERON:0000998,4.06e-10,1;UBERON:0006868,4.06e-10,1;UBERON:0001736,4.44e-10,1;UBERON:0006298,4.44e-10,1;UBERON:0002146,4.85e-10,1;UBERON:0005623,4.85e-10,1;UBERON:0001301,5.79e-10,1;UBERON:0002135,6.33e-10,1;UBERON:0005904,1.22e-09,4;UBERON:0003296,2.24e-09,4;UBERON:0010133,2.24e-09,4;UBERON:0007023,5.37e-09,114;UBERON:0000310,1.14e-08,10;UBERON:0001443,6.37e-08,11;UBERON:0003887,5.72e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94702919869853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.3216351836742,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,9.3753993990684,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,8.46452843541768,0,0,0,0,0,1.19076871422421,0,0,0,0,0.225595660617181,0.392125068635479,0.839107934879214,4.93359705082881,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0.313932918407225,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,1.39641200636127,1.83328339209347,0,0.199679000498991,0.429226048136571,1.78537165953498,0.53746777989381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,4.63464379255802,0,0,0,0,0,0.082092520749339,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.640724475406168,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,2.70757182057326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,1.13831095675649,0.354809480650555,0,0,0.135939465953663,0,0,0,0.627944742804112,0,0.280272163313789,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,2.11693525095465,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92503393273351,0.231522474323834,0,0,0,0,0,0.594092800654172,0,0,0.187967835959707,1.03132620757723,0,0,0,0,0,1.83491713361816,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0,0,0,0,0,17.6027679623328,1.22068853494722,0,0,0 | |||
|short_description=p5@PGR | |||
}} |
Revision as of 09:59, 11 January 2014
Short description: | p5@PGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PGR_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000534013_5end |
EntrezGene: | PGR |
HGNC: | 8910 |
UniProt: | B4E3T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 8.24e-18 | 2 |
male genital duct | 1.50e-12 | 3 |
internal male genitalia | 1.50e-12 | 3 |
valve | 1.78e-12 | 3 |
cardiac mesenchyme | 1.78e-12 | 3 |
cardial valve | 1.78e-12 | 3 |
tunica intima | 1.78e-12 | 3 |
heart layer | 1.78e-12 | 3 |
endocardium | 1.78e-12 | 3 |
endocardial cushion | 1.78e-12 | 3 |
presumptive endocardium | 1.78e-12 | 3 |
uterus or analog | 1.65e-10 | 1 |
heart left ventricle | 2.59e-10 | 1 |
cardiac ventricle | 2.59e-10 | 1 |
future cardiac ventricle | 2.59e-10 | 1 |
seminal vesicle | 4.06e-10 | 1 |
seminal fluid secreting gland | 4.06e-10 | 1 |
submandibular gland | 4.44e-10 | 1 |
submandibular gland primordium | 4.44e-10 | 1 |
pulmonary valve | 4.85e-10 | 1 |
semi-lunar valve | 4.85e-10 | 1 |
epididymis | 5.79e-10 | 1 |
mitral valve | 6.33e-10 | 1 |
duct of male reproductive system | 1.22e-09 | 4 |
gland of diencephalon | 2.24e-09 | 4 |
neuroendocrine gland | 2.24e-09 | 4 |
adult organism | 5.37e-09 | 114 |
breast | 1.14e-08 | 10 |
chest | 6.37e-08 | 11 |
intraembryonic coelom | 5.72e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.24e-21 | 4 |
breast cancer | 7.24e-21 | 4 |