FFCP PHASE1:Hg19::chr11:122293490..122293502,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=76bp_to_ENST00000526674_5end | |||
|description=CAGE_peak_3_at_ENST00000526674_5end | |||
|id=chr11:122293490..122293502,- | |||
|ontology_enrichment_celltype=CL:0002150!6.93e-11!3;CL:0000861!6.93e-11!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.37e-15;29!UBERON:0007123;7.75e-14;5!UBERON:0003124;3.71e-09;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.29e-08!143;DOID:305!6.21e-08!106;DOID:4231!4.11e-07!2;DOID:1907!4.11e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.79e-15,106;DOID:0050687,8.56e-12,143;DOID:3112,1.13e-08,1;DOID:162,8.08e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.36e-30!9;UBERON:0001557!1.70e-13!19;UBERON:0002046!5.71e-11!5;UBERON:0004117!5.71e-11!5;UBERON:0007689!5.71e-11!5;UBERON:0007123!5.71e-11!5;UBERON:0003091!5.71e-11!5;UBERON:0008947!1.00e-08!38;UBERON:0003258!1.00e-08!38;UBERON:0000065!5.69e-08!53;UBERON:0001905!8.88e-08!2;UBERON:0002757!8.88e-08!2;UBERON:0010134!8.88e-08!2;UBERON:0002784!8.88e-08!2;UBERON:0005408!8.88e-08!2;UBERON:0001899!8.88e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.97e-52;9!UBERON:0001557;9.97e-52;9!UBERON:0002046;7.75e-14;5!UBERON:0000072;4.12e-11;37!UBERON:0000065;3.88e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.05e-52,9;UBERON:0001557,1.93e-24,19;UBERON:0002046,7.13e-14,5;UBERON:0004117,7.13e-14,5;UBERON:0007689,7.13e-14,5;UBERON:0007123,7.13e-14,5;UBERON:0003091,7.13e-14,5;UBERON:0008947,1.12e-11,38;UBERON:0003258,1.12e-11,38;UBERON:0000072,3.16e-09,47;UBERON:0000065,6.92e-08,54 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,2.36613600079688,1.68584690078102,1.44606617930089,1.54411561825352,1.96091499683166,1.66089433377768,2.02246962240247,0.784885860501384,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,1.59956785891291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.384380134730212,0.893288987462089,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,1.22864280839693,0,0,1.22439575525196,0,0,0.19924798825107,0,0,0,0,0,0,1.07412704805365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85195387982283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06431964417994,1.16942907337897,1.23173185579814,0,0,0,0,0,0,2.93327074102205,0,0,0,0,0,0,0,0,2.35694034616795,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0.684347351537318,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0,0,2.14280734351315,0.336283722218824,0,0,2.30626162422861,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0.190941474834495,1.81905470062397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@ENST00000526674 | |||
}} |
Revision as of 10:54, 11 January 2014
Short description: | p3@ENST00000526674 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000526674_5end |
Coexpression cluster: | NA |
Association with transcript: | 76bp_to_ENST00000526674_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.05e-52 | 9 |
upper respiratory tract | 1.93e-24 | 19 |
thyroid gland | 7.13e-14 | 5 |
pharyngeal pouch | 7.13e-14 | 5 |
thyroid diverticulum | 7.13e-14 | 5 |
pharyngeal pouch 2 | 7.13e-14 | 5 |
thyroid primordium | 7.13e-14 | 5 |
respiratory primordium | 1.12e-11 | 38 |
endoderm of foregut | 1.12e-11 | 38 |
segment of respiratory tract | 3.16e-09 | 47 |
respiratory tract | 6.92e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.79e-15 | 106 |
cell type cancer | 8.56e-12 | 143 |
papillary adenocarcinoma | 1.13e-08 | 1 |
cancer | 8.08e-07 | 235 |