FFCP PHASE1:Hg19::chr12:52910884..52910895,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-423bp_to_S90014_5end | |||
|coexpression_cluster_id=C1170 | |||
|description=CAGE_peak_5_at_S90014_5end | |||
|id=chr12:52910884..52910895,- | |||
|ontology_enrichment_celltype=CL:0002076!2.41e-31!43;CL:0002159!6.34e-27!13;CL:0002368!2.43e-22!13;CL:0000223!3.91e-21!59;CL:0000066!4.04e-21!254;CL:0002251!5.73e-15!21;CL:0000362!1.68e-13!8;CL:0002077!5.80e-13!33;CL:0000240!1.12e-12!6;CL:0000311!1.12e-12!6;CL:0000079!1.12e-12!6;CL:0000237!1.12e-12!6;CL:0000036!1.12e-12!6;CL:0000357!1.12e-12!6;CL:0000114!1.12e-12!6;CL:0002202!1.44e-12!9;CL:0002632!1.44e-12!9;CL:0000076!7.64e-11!62;CL:0002621!1.24e-10!3;CL:0002328!1.45e-10!3;CL:0000068!2.05e-10!3;CL:0000069!2.05e-10!3;CL:0000307!2.05e-10!3;CL:0000377!2.05e-10!3;CL:0000349!2.79e-10!3;CL:0002577!2.79e-10!3;CL:0000312!3.93e-10!5;CL:0002166!4.04e-10!3;CL:0000622!7.42e-10!5;CL:0000154!3.26e-08!6;CL:0000244!1.09e-07!4;CL:0000731!1.09e-07!4;CL:0002327!1.68e-07!4;CL:0000220!1.92e-07!246;CL:0000575!2.53e-07!2;CL:0002321!2.57e-07!248;CL:0000317!2.77e-07!2;CL:1000448!2.77e-07!2;CL:0002308!2.77e-07!2;CL:0002140!2.77e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002202;2.00e-27;9!CL:0002632;2.00e-27;9!CL:0002368;2.49e-25;13!CL:0002159;1.40e-23;14!CL:0002621;6.20e-22;3!CL:0002328;1.39e-21;3!CL:0000307;1.49e-21;3!CL:0000317;2.07e-14;2!CL:1000448;2.07e-14;2!CL:0002308;2.07e-14;2!CL:0002140;2.07e-14;2!CL:0002076;6.04e-14;42!CL:0002077;1.80e-13;34!CL:0000362;1.34e-12;9!CL:0002577;1.19e-10;3!CL:0002166;3.34e-10;3!CL:0002252;1.31e-08;1!CL:0002327;8.38e-08;4!CL:0000244;1.20e-07;4!CL:0000731;1.20e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.10e-27,9;CL:0002632,2.10e-27,9;CL:0002368,2.15e-25,13;CL:0002159,1.82e-23,14;CL:0002621,7.15e-22,3;CL:0002328,1.02e-21,3;CL:0000068,2.20e-21,3;CL:0000069,2.20e-21,3;CL:0000307,2.20e-21,3;CL:0000377,2.20e-21,3;CL:0002076,3.40e-18,42;CL:0000066,2.08e-15,253;CL:0002077,5.76e-15,34;CL:0000317,2.22e-14,2;CL:1000448,2.22e-14,2;CL:0002308,2.22e-14,2;CL:0002140,2.22e-14,2;CL:0000223,1.23e-12,58;CL:0000362,1.45e-12,9;CL:0002577,1.11e-10,3;CL:0002166,4.31e-10,3;CL:0002252,1.31e-08,1;CL:0002327,8.25e-08,4;CL:0000244,8.83e-08,4;CL:0000731,8.83e-08,4;CL:0002321,3.91e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;1.49e-21;3!CL:0000223;6.70e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.20e-14!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.02e-14!72;UBERON:0004119!1.58e-13!169;UBERON:0000925!1.58e-13!169;UBERON:0006595!1.58e-13!169;UBERON:0003102!6.22e-13!95;UBERON:0000161!6.67e-13!35;UBERON:0000166!4.67e-12!21;UBERON:0001949!1.24e-10!3;UBERON:0004815!1.45e-10!3;UBERON:0002031!1.45e-10!3;UBERON:0000165!2.04e-10!28;UBERON:0000930!2.04e-10!28;UBERON:0007196!2.73e-10!14;UBERON:0001558!2.73e-10!14;UBERON:0000365!4.98e-10!5;UBERON:0001003!7.81e-10!14;UBERON:0007376!7.81e-10!14;UBERON:0007383!7.81e-10!14;UBERON:0003729!2.63e-09!5;UBERON:0005910!2.35e-08!6;UBERON:0002185!5.27e-08!4;UBERON:0000344!8.17e-08!12;UBERON:0001987!8.53e-08!4;UBERON:0004340!8.53e-08!4;UBERON:0001708!1.12e-07!4;UBERON:0001704!1.12e-07!4;UBERON:0001444!1.60e-07!48;UBERON:0001911!1.68e-07!4;UBERON:0005333!1.68e-07!4;UBERON:0008425!1.68e-07!4;UBERON:0005311!1.68e-07!4;UBERON:0003126!2.30e-07!7;UBERON:0001005!2.30e-07!7;UBERON:0002419!2.77e-07!2;UBERON:0007771!2.77e-07!2;UBERON:0003297!2.77e-07!2;UBERON:0001821!2.77e-07!2;UBERON:0003487!2.77e-07!2;UBERON:0001820!2.77e-07!2;UBERON:0005089!2.77e-07!2;UBERON:0005088!2.77e-07!2;UBERON:0005631!3.21e-07!14;UBERON:0000158!3.21e-07!14;UBERON:0003343!7.62e-07!4;UBERON:0004785!7.62e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.20e-22;3!UBERON:0004815;1.39e-21;3!UBERON:0002031;1.39e-21;3!UBERON:0007196;2.82e-16;15!UBERON:0001558;2.82e-16;15!UBERON:0002419;2.07e-14;2!UBERON:0007771;2.07e-14;2!UBERON:0003297;2.07e-14;2!UBERON:0001821;2.07e-14;2!UBERON:0003487;2.07e-14;2!UBERON:0001820;2.07e-14;2!UBERON:0000486;2.48e-14;12!UBERON:0002185;3.50e-13;5!UBERON:0004807;4.91e-11;22!UBERON:0010371;2.22e-10;31!UBERON:0003929;1.05e-09;7!UBERON:0000485;1.47e-09;7!UBERON:0003126;1.51e-09;7!UBERON:0001005;1.51e-09;7!UBERON:0005178;2.51e-09;34!UBERON:0002224;2.51e-09;34!UBERON:0005911;4.74e-09;36!UBERON:0003350;1.50e-08;8!UBERON:0001828;1.50e-08;8!UBERON:0005181;1.64e-08;35!UBERON:0001987;3.39e-08;4!UBERON:0001708;7.31e-08;4!UBERON:0008895;7.31e-08;4!UBERON:0001911;8.38e-08;4!UBERON:0001003;1.31e-07;15!UBERON:0007376;1.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.15e-22,3;UBERON:0004815,1.02e-21,3;UBERON:0002031,1.02e-21,3;UBERON:0007196,2.90e-16,15;UBERON:0001558,2.90e-16,15;UBERON:0002419,2.22e-14,2;UBERON:0007771,2.22e-14,2;UBERON:0003297,2.22e-14,2;UBERON:0001821,2.22e-14,2;UBERON:0003487,2.22e-14,2;UBERON:0001820,2.22e-14,2;UBERON:0005089,2.22e-14,2;UBERON:0005088,2.22e-14,2;UBERON:0002185,2.90e-13,5;UBERON:0003126,1.77e-09,7;UBERON:0001005,1.77e-09,7;UBERON:0005178,2.75e-09,34;UBERON:0002224,2.75e-09,34;UBERON:0005181,5.35e-09,35;UBERON:0004807,1.44e-08,28;UBERON:0003350,1.58e-08,8;UBERON:0001828,1.58e-08,8;UBERON:0001987,3.22e-08,4;UBERON:0004340,3.22e-08,4;UBERON:0001911,8.25e-08,4;UBERON:0005333,8.25e-08,4;UBERON:0008425,8.25e-08,4;UBERON:0005311,8.25e-08,4;UBERON:0001708,8.83e-08,4;UBERON:0008895,8.83e-08,4;UBERON:0001004,9.56e-08,74;UBERON:0001003,1.37e-07,15;UBERON:0007376,1.37e-07,15;UBERON:0007383,1.37e-07,15;UBERON:0000485,1.40e-07,9;UBERON:0004119,7.09e-07,160;UBERON:0000925,7.09e-07,160;UBERON:0006595,7.09e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4690032650996,2.409647350226,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73583874780305,0.741568885568859,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.31021668602176,3.00020732649918,3.15485054927904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2802611309364,10.1161577931858,0.603173834469785,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68669169933885,0.839910640994298,1.13420077793909,1.25381931783988,0.290633938513962,3.4504441124869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9470781442545,4.99306318531491,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,1.65284915360978,0.576570202095319,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00354986172663,3.35151137767894,1.08890984861323,0,0.86101074534246,1.68471475667626,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,2.23077990845765,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.258915569475,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.358611026963382,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@S90014 | |||
}} |
Revision as of 13:36, 11 January 2014
Short description: | p5@S90014 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_S90014_5end |
Coexpression cluster: | C1170_Placental_Bronchial_nasal_Esophageal_Urothelial_Corneal_Keratinocyte |
Association with transcript: | -423bp_to_S90014_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.10e-27 | 9 |
epithelial cell of lower respiratory tract | 2.10e-27 | 9 |
respiratory epithelial cell | 2.15e-25 | 13 |
general ecto-epithelial cell | 1.82e-23 | 14 |
gingival epithelial cell | 7.15e-22 | 3 |
bronchial epithelial cell | 1.02e-21 | 3 |
duct epithelial cell | 2.20e-21 | 3 |
branched duct epithelial cell | 2.20e-21 | 3 |
tracheal epithelial cell | 2.20e-21 | 3 |
tracheoblast | 2.20e-21 | 3 |
endo-epithelial cell | 3.40e-18 | 42 |
epithelial cell | 2.08e-15 | 253 |
ecto-epithelial cell | 5.76e-15 | 34 |
sebum secreting cell | 2.22e-14 | 2 |
epithelial cell of sweat gland | 2.22e-14 | 2 |
epithelial cell of skin gland | 2.22e-14 | 2 |
acinar cell of sebaceous gland | 2.22e-14 | 2 |
endodermal cell | 1.23e-12 | 58 |
epidermal cell | 1.45e-12 | 9 |
placental epithelial cell | 1.11e-10 | 3 |
epithelial cell of Malassez | 4.31e-10 | 3 |
epithelial cell of esophagus | 1.31e-08 | 1 |
mammary gland epithelial cell | 8.25e-08 | 4 |
transitional epithelial cell | 8.83e-08 | 4 |
urothelial cell | 8.83e-08 | 4 |
embryonic cell | 3.91e-07 | 250 |