FFCP PHASE1:Hg19::chr14:60975871..60975880,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4990 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10892 | |||
|TSSclassifier=strong | |||
|UniProt=O95475,Q6P051 | |||
|association_with_transcript=-57bp_to_NM_007374,uc001xfa.3_5end | |||
|coexpression_cluster_id=C1726 | |||
|description=CAGE_peak_4_at_SIX6_5end | |||
|id=chr14:60975871..60975880,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.05e-21!3;CL:0005012!1.05e-21!3;CL:0000067!1.05e-21!3;CL:0002304!1.05e-21!3;CL:0000306!2.73e-16!4;CL:0002222!2.73e-16!4;CL:0002224!2.73e-16!4;CL:0000075!3.05e-15!27;CL:0002322!1.78e-12!5;CL:0000133!2.24e-11!59;CL:0000221!3.47e-09!71;CL:0000710!1.93e-08!20;CL:0000342!4.71e-08!1;CL:0002565!4.71e-08!1;CL:0000325!1.09e-07!39;CL:0002077!6.28e-07!33;CL:0000333!8.57e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.65e-46;3!CL:0000067;1.65e-46;3!CL:0005012;1.65e-46;3!CL:0002304;1.65e-46;3!CL:0000306;6.73e-35;4!CL:0002222;6.73e-35;4!CL:0002224;6.73e-35;4!CL:0000075;3.10e-27;27!CL:0000333;5.27e-13;5!CL:0000710;1.49e-12;20!CL:0002321;1.20e-09;15!CL:0002077;1.80e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.21e-46,3;CL:0000067,1.21e-46,3;CL:0005012,1.21e-46,3;CL:0002304,1.21e-46,3;CL:0000306,6.73e-35,4;CL:0002222,6.73e-35,4;CL:0002224,6.73e-35,4;CL:0000075,3.10e-27,27;CL:0000710,1.49e-12,20;CL:0000133,9.50e-09,59;CL:0002077,1.71e-07,34;CL:0000221,3.68e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.36e-11;6!DOID:171;5.94e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.36e-11,6;DOID:171,5.94e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000970!1.37e-32!20;UBERON:0002104!5.87e-31!21;UBERON:0007625!4.13e-30!11;UBERON:0000020!4.05e-28!23;UBERON:0000488!5.26e-28!4;UBERON:0000019!8.15e-28!19;UBERON:0000047!8.15e-28!19;UBERON:0004088!8.15e-28!19;UBERON:0003072!8.15e-28!19;UBERON:0003071!8.15e-28!19;UBERON:0004128!8.15e-28!19;UBERON:0001032!7.08e-27!24;UBERON:0004456!7.08e-27!24;UBERON:0001456!4.95e-25!21;UBERON:0001801!1.73e-23!14;UBERON:0001778!1.05e-21!3;UBERON:0001775!1.05e-21!3;UBERON:0002203!9.45e-19!6;UBERON:0001768!9.45e-19!6;UBERON:0005085!9.85e-18!29;UBERON:0010077!2.73e-16!4;UBERON:0005389!2.73e-16!4;UBERON:0000484!2.73e-16!4;UBERON:0002546!2.73e-16!4;UBERON:0000965!2.73e-16!4;UBERON:0001803!2.73e-16!4;UBERON:0003073!2.73e-16!4;UBERON:0005426!2.73e-16!4;UBERON:0003056!5.08e-16!61;UBERON:0000007!4.56e-15!2;UBERON:0003075!1.67e-12!86;UBERON:0007284!1.67e-12!86;UBERON:0002346!7.82e-12!90;UBERON:0004121!2.37e-10!169;UBERON:0002200!2.69e-10!11;UBERON:0006876!2.69e-10!11;UBERON:0001444!3.85e-10!48;UBERON:0000924!4.97e-10!173;UBERON:0006601!4.97e-10!173;UBERON:0000076!2.18e-08!8;UBERON:0002506!4.71e-08!1;UBERON:0001769!4.71e-08!1;UBERON:0003296!5.80e-08!4;UBERON:0010133!5.80e-08!4;UBERON:0000033!6.60e-08!123;UBERON:0002363!9.29e-08!1;UBERON:0007647!9.29e-08!1;UBERON:0010115!9.29e-08!1;UBERON:0002336!1.21e-07!1;UBERON:0001018!1.21e-07!1;UBERON:0002473!1.21e-07!1;UBERON:0005340!1.21e-07!1;UBERON:0002316!1.21e-07!1;UBERON:0003544!1.21e-07!1;UBERON:0001020!1.21e-07!1;UBERON:0005970!1.21e-07!1;UBERON:0002437!1.21e-07!1;UBERON:0000153!2.01e-07!129;UBERON:0007811!2.01e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.15e-49;11!UBERON:0001778;1.65e-46;3!UBERON:0001775;1.65e-46;3!UBERON:0001801;4.98e-39;14!UBERON:0000970;5.96e-37;20!UBERON:0002104;3.52e-35;21!UBERON:0000488;4.23e-35;4!UBERON:0010077;6.73e-35;4!UBERON:0005389;6.73e-35;4!UBERON:0000484;6.73e-35;4!UBERON:0000965;6.73e-35;4!UBERON:0001803;6.73e-35;4!UBERON:0000020;4.23e-32;23!UBERON:0000007;1.00e-31;2!UBERON:0001032;9.43e-31;24!UBERON:0004456;9.43e-31;24!UBERON:0000019;9.43e-29;19!UBERON:0000047;9.43e-29;19!UBERON:0004088;9.43e-29;19!UBERON:0010230;9.43e-29;19!UBERON:0001456;5.24e-26;21!UBERON:0002203;1.15e-23;6!UBERON:0001768;1.15e-23;6!UBERON:0002200;1.15e-23;6!UBERON:0010371;4.17e-17;31!UBERON:0003296;2.09e-16;4!UBERON:0010133;2.09e-16;4!UBERON:0006876;3.21e-13;11!UBERON:0000013;5.27e-13;5!UBERON:0002410;5.27e-13;5!UBERON:0001894;8.72e-10;7!UBERON:0000010;1.25e-07;8!UBERON:0001444;3.29e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,9.76e-50,11;UBERON:0001778,1.21e-46,3;UBERON:0001775,1.21e-46,3;UBERON:0001801,4.37e-39,14;UBERON:0000970,3.34e-35,21;UBERON:0002104,3.34e-35,21;UBERON:0000488,3.35e-35,4;UBERON:0010077,6.73e-35,4;UBERON:0005389,6.73e-35,4;UBERON:0000484,6.73e-35,4;UBERON:0002546,6.73e-35,4;UBERON:0000965,6.73e-35,4;UBERON:0001803,6.73e-35,4;UBERON:0003073,6.73e-35,4;UBERON:0005426,6.73e-35,4;UBERON:0000007,1.00e-31,2;UBERON:0000020,9.02e-31,24;UBERON:0001032,9.02e-31,24;UBERON:0004456,9.02e-31,24;UBERON:0000019,2.37e-27,20;UBERON:0000047,2.37e-27,20;UBERON:0010312,2.37e-27,20;UBERON:0004088,2.37e-27,20;UBERON:0010230,2.37e-27,20;UBERON:0003072,2.37e-27,20;UBERON:0004128,2.37e-27,20;UBERON:0003071,2.37e-27,20;UBERON:0001456,7.39e-25,22;UBERON:0002203,9.87e-24,6;UBERON:0001768,9.87e-24,6;UBERON:0002200,9.87e-24,6;UBERON:0000076,7.88e-18,8;UBERON:0005085,1.32e-17,31;UBERON:0003296,2.09e-16,4;UBERON:0010133,2.09e-16,4;UBERON:0003056,3.10e-15,61;UBERON:0006876,2.95e-13,11;UBERON:0000013,5.27e-13,5;UBERON:0002410,5.27e-13,5;UBERON:0003075,3.21e-11,82;UBERON:0007284,3.21e-11,82;UBERON:0001444,4.59e-11,49;UBERON:0002346,1.13e-10,86;UBERON:0001894,8.72e-10,7;UBERON:0006222,8.72e-10,7;UBERON:0000033,1.19e-09,56;UBERON:0010371,1.00e-08,104;UBERON:0000153,1.09e-08,62;UBERON:0007811,1.09e-08,62;UBERON:0004121,7.63e-08,171;UBERON:0000924,7.63e-08,171;UBERON:0006601,7.63e-08,171;UBERON:0000010,1.25e-07,8;UBERON:0010314,9.82e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59232305223458,1.99556457716308,5.09441757020131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,1.0366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,2.88662684050547,4.17349457910277,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46393563640703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1860729253635,1.41539347670307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24875922965642,2.50428410486427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500335809236594,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@SIX6 | |||
}} |
Revision as of 20:23, 11 January 2014
Short description: | p4@SIX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIX6_5end |
Coexpression cluster: | C1726_acute_Lens_pituitary_Ciliary_eye_H9_retina |
Association with transcript: | -57bp_to_NM_007374, uc001xfa.3_5end |
EntrezGene: | SIX6 |
HGNC: | 10892 |
UniProt: | O95475Q6P051 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.21e-46 | 3 |
ciliated epithelial cell | 1.21e-46 | 3 |
multi-ciliated epithelial cell | 1.21e-46 | 3 |
non-pigmented ciliary epithelial cell | 1.21e-46 | 3 |
crystallin accumulating cell | 6.73e-35 | 4 |
vertebrate lens cell | 6.73e-35 | 4 |
lens epithelial cell | 6.73e-35 | 4 |
columnar/cuboidal epithelial cell | 3.10e-27 | 27 |
neurecto-epithelial cell | 1.49e-12 | 20 |
neurectodermal cell | 9.50e-09 | 59 |
ecto-epithelial cell | 1.71e-07 | 34 |
ectodermal cell | 3.68e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.36e-11 | 6 |
neuroectodermal tumor | 5.94e-07 | 10 |