FFCP PHASE1:Hg19::chr15:59186729..59186746,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=79811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=20709 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=34bp_to_uc002afn.2_5end | |||
|description=CAGE_peak_3_at_SLTM_5end | |||
|id=chr15:59186729..59186746,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.99e-30!239;DOID:162!8.83e-30!235;DOID:0050687!4.82e-16!143;DOID:0050686!1.57e-12!137;DOID:305!1.11e-11!106;DOID:2531!1.18e-10!51;DOID:0060083!1.18e-10!51;DOID:1240!3.23e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.17e-07;39!DOID:2531;4.99e-07;51!DOID:0060083;4.99e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.15e-30,239;DOID:162,8.16e-30,235;DOID:0050687,9.93e-16,143;DOID:0050686,1.63e-12,137;DOID:305,1.84e-11,106;DOID:2531,5.62e-11,51;DOID:0060083,5.62e-11,51;DOID:1240,1.75e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,5.1384125733836,1.12763523276777,2.00146596706261,1.34088328328186,0.872338524100369,0,3.79031924056099,2.35067065379855,0,0,0.436882744260345,0,1.48519623552056,0.662794751455832,0.672325146451775,3.61616716814386,0.730310090387373,2.43966399395253,0.61560529038394,0.408001382488506,0,1.71741592278634,4.10623275218653,3.13856598987007,6.49513948857586,6.48594656654571,8.26463203793632,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,10.4580720783407,8.10364625178303,0,1.10799081706375,5.21415563422368,3.68918480216948,1.79132379391939,1.29557466407592,1.54545340580512,5.96132778996215,4.1566353805769,3.15359279544161,6.50801303335917,4.52284676824008,4.95530193432166,3.45230870786581,2.30544635876191,0.47296445977717,2.41321976515633,1.93645405075148,4.06279459783025,9.03563229804502,1.36453075028923,0.674170453335254,4.89734227793444,2.24650318953266,2.55734850319616,1.9791078011203,2.59302754908121,2.55734850319616,13.6398342155434,0.56738522469114,3.11411124497787,3.51748131359441,7.30076085788282,0.434377689410233,1.81619850790011,1.10483290796269,1.89877432464531,0.845021145247767,0.850417199860174,1.67726916406701,0.898629049171961,1.50176892841506,0.803627933485401,0.285012743741249,1.59133341759272,1.46131323011707,0,0.546138611262131,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,1.32208974556972,0,5.69212969109448,4.11066032559657,3.44045905312706,1.32171328579026,0.560508562981536,0.790152254325231,3.540775862049,8.25322601773246,7.81285696198135,2.17342444007882,1.95553359980154,1.4203434172042,0,1.44833593950726,1.76763544484902,1.10766947291811,1.35401931882508,8.32593578216889,7.02320476823343,11.5106533222573,2.76350017785848,2.31842468588042,2.81744470007915,0.267540828089713,1.04535523804977,1.35971211237079,1.53288197440768,1.03088233644789,3.54227568827304,0.95569624297229,0,0,0.451725357233318,0.511946444617674,0,0,0,2.41928091869679,9.62784704820626,7.38604459802275,0,2.01210257911091,0.767175371061182,4.3372698286148,0,4.34539556882471,0.795285947051099,0.486634870302636,1.98523116044542,3.32594096193846,2.98638271356629,1.30979075497713,1.09288586487763,1.11235332835329,0.324547393654683,1.21890816109487,3.0580330919339,1.19245312152671,0,0.371457501329565,0,0,0.347140501607594,0,0.419499436209906,2.47606237746061,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,1.95249646038536,1.10298924103761,1.62028389576352,0.892997282840798,0.898117490504679,0.900891843866578,0,0,0.732806975721629,0,0,0,2.48485975847659,2.65924074495618,1.05927344650575,2.58152958673932,2.12801029319014,0,0,2.22000793575444,0,0.404132016209064,0.817309515567294,0.302714855289863,1.72852777344,0.468642863667593,0.624320153660641,0.570471821544449,4.93180645820944,0.939475989150119,0.809364721840658,0.140450806702248,0.816616685019573,5.40470996171779,0.826606249406124,0,3.4617370098998,0,0,3.36672227908132,1.37630371859161,0.554128230968366,0.877955241761676,1.22595118319608,0.901428353439581,1.58805056424029,5.202299434977,4.27114777637135,2.33125091275518,2.40072876867522,1.44273540933814,2.31876486041066,0.930584281657949,3.88185564154912,0.68205903612839,2.77677151668526,1.19664868234989,0.80823028409406,1.42003837006646,1.5112814734146,2.20428770003634,0.57978255948989,1.09098448236334,0.860413786167011,5.12289565744301,5.4337205011809,4.29917588617218,4.45742536566093,7.56962552626885,6.56959246336494,0,4.5026865673502,0,5.10804720835177,1.44375896333917,4.25904480143438,4.21461725195254,4.09718750801919,4.96322877295773,2.83243277320128,4.03360052488864,4.1797705529651,4.51309369788296,2.30848294167834,0,0,0.4115740113314,0,3.80265104465493,4.91413608338813,8.27105869353966,4.85609409356116,2.33678033231916,1.02940686179115,1.97550513735526,0,5.32803553781643,2.68506490959736,0.325808305310325,0,2.88662684050547,1.15930404975077,0.70445216541493,0.433099343283221,0.462985512576611,5.51737041480335,0,1.71697232418975,0.984868024349589,0.936017060556951,0.891786973732369,0.93733833986777,3.86358894857377,2.26840155587818,5.46306988487375,5.81267877027924,0,0,3.34584049250259,1.24396869324463,1.15295962733569,0.50496973370552,2.79390734885544,0,0,1.71072446022705,1.02827492703324,2.70308752059526,0.571652865261156,0.112131084345361,0,2.56684000373325,1.29271715757778,0,5.917119267892,3.45719551560332,2.08014873822732,0.514414748524284,0,1.0656887160644,4.00338382242813,1.08524321078289,0.823240336780769,2.60588947434988,1.06617584622764,3.16780749173372,0.904318131178758,0.871533458600294,6.39827143565165,4.86495122564762,5.02257091432126,12.6500363689819,2.39624855491583,2.29723871668228,0,1.44781306667579,3.6985738059069,0.716243852959582,5.82842748766342,4.3346767244424,6.68445482064504,6.67383788654692,1.52456774533478,0,3.86644406388848,2.51274398001523,3.18969375826582,6.74106321552464,11.966458368161,0.828831026872071,1.71768088406796,2.00068208423871,1.08506009479894,4.57535895367776,5.35286966391485,3.6271555457805,2.34282829985426,0,0,0,3.98535359121262,0.368738337083406,3.73599542212756,0.391602314925481,0,3.3082884179662,1.2942852049117,1.38745825144478,0.303127571446259,1.66435439510497,0.604780586659361,1.24053903909388,2.60885354589706,2.24528075546459,1.53766979106841,3.07024349440022,4.02134802859019,0,4.31787142647436,1.42049380250502,2.54594183642808,4.67328986265259,2.5566283261191,2.1754700926492,2.20557117333613,14.4567152629357,1.95184561879831,5.46273504020151,2.88473712910733,0,2.92658280996776,0,0,2.84989398010764,0,0.170093705276516,3.67057057373637,0,0.270946437543853,0,0.509752546090077,0,0.447749509444357,4.82371728621056,1.0457418040996,1.79515087581472,0.656029291399411,2.92840555197873,3.29731237272711,6.77614039655741,2.64030399745882,0,1.30012049207304,0,2.99679226705578,0.616194468458578,1.38153307253517,0.827019434907183,4.0819693049944,3.0453505721988,2.13066568540252,3.65031346151623,4.62797763010739,1.53752053892085,1.40373983744043,4.6532579193553,1.85938219718914,1.88887408098384,0,0,0.532306030317022,0,0,0.143124886741991,0.372158369359667,1.58189712359363,0.571890581771475,0.511795582622668,3.85145089230528,0,0,0.719489830333259,0.274537029736055,0.824686816419805,0,0,0.421258456238981,0,4.38684281336312,0,3.27599787379166,3.95935209470396,1.13008116620243,0,1.32687795048244,0,0,0.655894752046633,0,0.6196469961995,0,3.44187245289724,0.294747123039363,0,1.06428319221179,2.9555068941673,3.95153871551882,0,0,0.384888450902048,0.670302275535787,0,3.57746442951761,0,0,0.886860307073351,1.60806380144872,2.02979043692868,1.52927441428475,2.27858874869665,3.09701308095126,1.64544909234478,1.94541993357815,1.08006287447623,3.96562588147135,3.09789806269672,1.92495971052672,2.94048259177238,20.2525460887033,4.03953796334046,7.5410353949319,21.522546818391,9.77938920020801,1.1490322207942,4.23347165447766,6.49243880549111,9.82790123397106,7.53174440809534,7.99067468442419,0,10.8346737793026,7.22646337966648,15.3367777465196,3.40676990152261,5.49608551609224,3.6868891717015,3.13146551049382,2.83643540910244,6.83858333907141,3.89768643453339,2.46174797895425,6.49093628342359,1.99843180798692,1.4098700508785,3.92995134857262,2.93016358543788,2.42721043499027,2.67464122265948,4.2620422020962,1.19372242368845,1.18785872333055,3.99308912729002,0.994147647766298,7.59614848616769,3.67318726575589,6.26254722061686,6.12263683571181,1.19548792950642,1.38141957765574,7.306049687774,3.47713520507326,6.0311554675924,1.86623752597084,1.25815691606258,18.6182021662634,2.55786185113436,1.28236427328014,2.3948309234694,1.11136990144637,0,2.87581104301739,0,1.82299432759663,3.67331999984022,0,5.00691172456199,5.33932665614809,10.4010579977892,1.72371686620732,3.2076507472158,11.6328746605306,4.42870692906919,6.63280412439744,6.10326945268333,7.96170671504817,6.50204761697804,1.53569778007781,5.01116932187355,2.23077990845765,3.61666214967846,0.797594390929008,4.15015027898508,7.27036919719154,5.21507385225639,1.91400695839152,1.00757352742049,3.73124343213044,4.08773192782946,2.82564461511045,2.32696354660219,4.51191321234361,3.13700054908383,3.85989650044438,7.02088811079485,4.13235105348985,4.85295548414462,3.26465616318295,1.27217764290547,3.89499551535764,0,0.796118080530053,1.83309043480088,5.93042257361244,2.10058696209055,3.65476823269094,1.81983059047828,1.60515529459758,3.98249557733077,14.2314735588219,2.54364004611717,8.01175252462506,1.57833761139756,6.04953580243319,2.14250933141343,0.505492637027904,0.751617097072463,1.45163467956146,2.65861549082874,2.31694369112849,2.19753042885058,0,1.99226682220855,13.5901179552876,6.59527005673497,2.84177952501695,3.3953090566357,1.04836000945218,13.7588825977293,7.64375017183773,8.98998600160082,7.63673750594846,1.45483524732629,2.47117154736201,3.61569185248852,4.11125773940253,3.17943378724783,2.59574263419103,18.9684841252759,1.12222348352147,0.640358984218058,9.19124204077799,8.21315377778404,3.32156128881155,11.1536748610277,7.77895909136008,1.98804056904692,8.24929121158784,5.57207244901818,2.824276850433,3.2639429643623,1.15580235960608,2.40168115483916,4.65478288232776,0,3.86788897277961,6.04640914842423,1.11712960508902,6.41649187232714,2.15361907373044,3.99358000997982,0,0.669514372325618,1.41085292222125,0.720599767084807,1.16495949527454,4.88455730304787,3.29663433524666,3.50498428041761,9.94117563298963,2.37085329784197,7.95229689809303,7.62739074224823,9.48443575943613,7.70220844944509,13.2940908169339,1.1248694577575,0.77380195455795,0.485996453264197,2.34804281319486,4.80714814525109,0.472091293214983,0.950403028674658,1.97216073266129,1.72723677587501,2.1440859791201,3.31045985182716,2.28841683889275,0.542999601753713,2.5926644736038,2.61269888087527,1.19730191562487,6.56740165994712,2.55582032678133,2.15292973888239,1.17241786942466,0,6.72271373080063,6.08269968016374,0.855434189421647,0,1.28144895081234,0.628817220398664,2.89967338743037,4.46549419630756,2.96417447846916,2.19226677085613,3.83004754662109,0,0.5013797880454,0,0.327872630709804,1.09937867375164,4.43034089983493,6.46739203980405,6.63511932744449,1.14681839138014,6.87760119528484,0.18628920882415,11.0678907948985,3.62443183090109,1.36484205787483,12.5604746759786,3.2937214757744,2.81000943484129,2.17381542916238,2.38807684618998,3.03827302801392,3.88364103051829,2.46223906857616,2.51567901752575,0,1.60188047877847,1.36107831386915,1.86524640699337,2.95710299979268,4.14171594625626,2.69881867298163,2.32894435314389,4.56176828624941,1.06336685823198,3.1304703708704,1.80309130796662,2.28483127301277,4.47557806525128,1.63663793282303,3.22231671127465,0,5.17524655308201,2.40016658797892,1.37358282073117,0.673498977531838,0,1.34833881285112,3.00218227924896,3.91491437947817,2.94717703165954,3.24131464053368,11.7473618163104,5.90993175568908,2.16161013012681,4.16639694199544,5.30067437837643,8.87404576046208,7.09558250742905,8.1997285948143,2.76344273384959,3.95017943030597,8.15724773295211,1.36402216187572,0.398594520940089,2.28991551958182,6.22458712808184,2.45772908753719,3.59230609709666,2.99981093782395,2.66729324235352,10.8495437186314,0.567515953566836,4.41854280604418,0.139879507719444,0.622077260032973,1.53473245564382,2.80344509631373,5.34704202310048,5.13285299502465,4.07358071889661,12.1167704457959,5.20530209887809,1.67593475391973,0.954013051960256,8.1227597351291,0,1.76337971845342,1.8374728641192,1.60573062741149,1.41696576325585,4.94864963077169,0.205116364240755,2.01657356977374,0.345786262321089,13.4024785874436,0,5.00553364355231,1.06172751012966,7.70400113791052,4.27444964756251,1.90691047733584,0,3.38157577597667,1.27857558193737,1.61364054962816,0.781514011233092,4.97622719514703,8.67991162803513,2.80926563812386,2.16120270778863,5.46754669029693,10.7477134180616,1.14148458349032,3.82882366312754,2.74128883428591,8.9318012110073,8.26594848490217,5.366021960863,1.60710550763486,5.71682327772001,2.42786241694653,7.74051450594412,2.04015451374069,3.22655165156182,0.342976018874837,3.19457744991109,0.591954962065642,8.86453806629762,6.56265271163208,1.56986185701028,7.07020154622009,5.32517110296199,3.65263488203798,2.80705868584208,6.21077194253165,1.50100742770978,9.95485753916178,3.60348418641188,2.43401581223611,2.40513409419076,7.04534958154325,8.36520537760355,1.38251932362818,0,8.75656805406184,6.0501517379002,1.27016115057279,1.8328549483524,0.62041277132864,0.955538938977433,7.15874763505871,2.84635677484205,1.82876887473404,4.53200186031526,1.84793052341245,3.4794432940146,0,1.40363678077263,15.7171112377481,1.66488127088596,4.17900503544152,6.70637152147118,6.49140227336696,2.39239890134628,10.053739783182,8.93602863086893,5.88355972209373,3.53514820652439,6.87079634902308,7.42616000817715,0.4226557275834,2.20905249094162,2.16163011353663,0.322289439867886,5.99646935549574,5.8922799739867,0.705789743431384,5.93786113499845,1.46067277649303,2.75237570042724,9.31707290484433,8.04634967185241,0.475940431336403,0.436350690340377,6.87734892670021,3.71995018166751,4.62175628631418,4.75889218336168,2.90182777120682,13.3303997795709,3.4208595273088,4.58949733838918,10.1542614000913,3.85958578046349,19.8058956040976,1.28823786971007,6.16317499359211,4.97501663675268,9.92956760274194,1.0661699095049,3.80903090341985,2.1314340245882,1.73809200028402,4.59740636580515,2.22765053973577,9.90374225895274,3.9189014621453,5.4757328173645,0.134704106029175,0.860666464712116,2.99394320891412,2.11648498388534,7.15073217380694,1.9307228228694,2.96423166951737,0,0.611207220914332,3.25516942652591,0.665756774185513,1.61019034872821,6.09080135376143 | |||
|short_description=p3@SLTM | |||
}} |
Revision as of 23:50, 11 January 2014
Short description: | p3@SLTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_3_at_SLTM_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_uc002afn.2_5end |
EntrezGene: | SLTM |
HGNC: | 20709 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.15e-30 | 239 |
cancer | 8.16e-30 | 235 |
cell type cancer | 9.93e-16 | 143 |
organ system cancer | 1.63e-12 | 137 |
carcinoma | 1.84e-11 | 106 |
hematologic cancer | 5.62e-11 | 51 |
immune system cancer | 5.62e-11 | 51 |
leukemia | 1.75e-08 | 39 |