FFCP PHASE1:Hg19::chr15:83316711..83316723,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21744 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZB8 | |||
|association_with_transcript=4bp_to_ENST00000450751,NM_030594,uc002biv.2_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_12_at_CPEB1_5end | |||
|id=chr15:83316711..83316723,- | |||
|ontology_enrichment_celltype=CL:0000077!1.99e-07!19 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.03e-26;10!UBERON:0005564;3.03e-26;10 | |||
|ontology_enrichment_disease=DOID:14566!2.16e-07!239;DOID:162!3.79e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.37e-29;1!DOID:4549;2.37e-29;1!DOID:5861;2.37e-29;1!DOID:6496;2.37e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.37e-29,1;DOID:4549,2.37e-29,1;DOID:5861,2.37e-29,1;DOID:6496,2.37e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.41e-09!69;UBERON:0006238!1.41e-09!69;UBERON:0005743!2.01e-08!86;UBERON:0001017!3.25e-08!82;UBERON:0000473!4.89e-08!8;UBERON:0000073!5.22e-08!94;UBERON:0001016!5.22e-08!94;UBERON:0002780!2.81e-07!41;UBERON:0001890!2.81e-07!41;UBERON:0006240!2.81e-07!41;UBERON:0001869!3.66e-07!32;UBERON:0002346!4.29e-07!90;UBERON:0003080!4.86e-07!42;UBERON:0001049!5.44e-07!57;UBERON:0005068!5.44e-07!57;UBERON:0006241!5.44e-07!57;UBERON:0007135!5.44e-07!57;UBERON:0003075!7.58e-07!86;UBERON:0007284!7.58e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.42e-32;8!UBERON:0003135;6.11e-24;11!UBERON:0000991;6.31e-13;21!UBERON:0003101;2.26e-12;22!UBERON:0000079;2.26e-12;22!UBERON:0002418;9.90e-11;3!UBERON:0004755;9.90e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.28e-32,8;UBERON:0003135,5.65e-24,11;UBERON:0000991,6.06e-13,21;UBERON:0009196,6.06e-13,21;UBERON:0009117,6.06e-13,21;UBERON:0005564,6.06e-13,21;UBERON:0004176,2.17e-12,22;UBERON:0003101,2.17e-12,22;UBERON:0000079,2.17e-12,22;UBERON:0002418,9.90e-11,3;UBERON:0004755,9.90e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,1.11598390910176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0.392125068635479,0.335643173951685,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0,1.20258735531594,0.311064574191741,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,1.235585773681,0,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0.276697269872462,0,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.782982875895635,0.226705925512272,0,0,0,0,0.438568099157414,0,0.964570191354574,0,0,0.345430341731199,0.607719912354764,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.455324382702595,0,0.115233987555779,0,0.0679697329768317,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.340853619036631,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0.118920090777569,0,0.439762066981716,0.452888530700021,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0,0.203977659483963,0,0.18378979906969,1.50424523575425,3.48582011803901,3.7514978221865,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.213454691755431,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p12@CPEB1 | |||
}} |
Revision as of 00:55, 12 January 2014
Short description: | p12@CPEB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CPEB1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 4bp_to_ENST00000450751, NM_030594, uc002biv.2_5end |
EntrezGene: | CPEB1 |
HGNC: | 21744 |
UniProt: | Q9BZB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 1.28e-32 | 8 |
male reproductive organ | 5.65e-24 | 11 |
gonad | 6.06e-13 | 21 |
indifferent external genitalia | 6.06e-13 | 21 |
indifferent gonad | 6.06e-13 | 21 |
gonad primordium | 6.06e-13 | 21 |
external genitalia | 2.17e-12 | 22 |
male organism | 2.17e-12 | 22 |
male reproductive system | 2.17e-12 | 22 |
cartilage tissue | 9.90e-11 | 3 |
skeletal tissue | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.37e-29 | 1 |
extraosseous chondrosarcoma | 2.37e-29 | 1 |
myxoid chondrosarcoma | 2.37e-29 | 1 |
extraskeletal myxoid chondrosarcoma | 2.37e-29 | 1 |