FFCP PHASE1:Hg19::chr16:68301840..68301845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C839 | |||
|description=CAGE_peak_at_chr16:68301840..68301845,+ | |||
|id=chr16:68301840..68301845,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.56e-19!7;CL:0000586!2.56e-19!7;CL:0002586!5.87e-10!3;CL:0000064!1.26e-09!3;CL:0005012!1.26e-09!3;CL:0000067!1.26e-09!3;CL:0002304!1.26e-09!3;CL:0000325!4.22e-09!39;CL:0002322!1.09e-08!5;CL:0000453!2.66e-08!5;CL:0000149!1.56e-07!4;CL:0000147!8.33e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.60e-41;3!CL:0000149;4.42e-31;4!CL:0000064;1.77e-18;3!CL:0000067;1.77e-18;3!CL:0005012;1.77e-18;3!CL:0002304;1.77e-18;3!CL:0000039;1.04e-17;7!CL:0000586;1.04e-17;7!CL:0000147;1.13e-15;14!CL:0000342;1.72e-14;1!CL:0002565;1.72e-14;1!CL:0002253;6.80e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,3.86e-41,3;CL:0000149,4.66e-31,4;CL:0000064,1.48e-18,3;CL:0000067,1.48e-18,3;CL:0005012,1.48e-18,3;CL:0002304,1.48e-18,3;CL:0000039,1.10e-17,7;CL:0000586,1.10e-17,7;CL:0000147,1.22e-15,14;CL:0000342,2.11e-14,1;CL:0002565,2.11e-14,1;CL:0002253,5.74e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.80e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!4.03e-20!11;UBERON:0000970!4.04e-18!20;UBERON:0002104!4.12e-17!21;UBERON:0000019!2.65e-16!19;UBERON:0000047!2.65e-16!19;UBERON:0004088!2.65e-16!19;UBERON:0003072!2.65e-16!19;UBERON:0003071!2.65e-16!19;UBERON:0004128!2.65e-16!19;UBERON:0000020!2.33e-15!23;UBERON:0000966!4.46e-15!5;UBERON:0005388!4.46e-15!5;UBERON:0001802!4.46e-15!5;UBERON:0001032!1.36e-14!24;UBERON:0004456!1.36e-14!24;UBERON:0001456!1.71e-14!21;UBERON:0001737!2.09e-13!9;UBERON:0000488!2.86e-12!4;UBERON:0000063!7.60e-11!97;UBERON:0001781!5.87e-10!3;UBERON:0001782!5.87e-10!3;UBERON:0005424!5.87e-10!3;UBERON:0005085!9.07e-10!29;UBERON:0001778!1.26e-09!3;UBERON:0001775!1.26e-09!3;UBERON:0001048!1.27e-09!168;UBERON:0000473!1.33e-08!8;UBERON:0003135!1.58e-08!11;UBERON:0002203!3.82e-08!6;UBERON:0001768!3.82e-08!6;UBERON:0001801!9.88e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.90e-43;5!UBERON:0005388;1.90e-43;5!UBERON:0001802;1.90e-43;5!UBERON:0007625;3.44e-43;11!UBERON:0001781;3.60e-41;3!UBERON:0001782;3.60e-41;3!UBERON:0000019;8.16e-34;19!UBERON:0000047;8.16e-34;19!UBERON:0004088;8.16e-34;19!UBERON:0010230;8.16e-34;19!UBERON:0000970;4.17e-32;20!UBERON:0002104;1.47e-30;21!UBERON:0001456;1.47e-30;21!UBERON:0000488;4.49e-30;4!UBERON:0000020;7.20e-28;23!UBERON:0001032;1.08e-26;24!UBERON:0004456;1.08e-26;24!UBERON:0002203;2.67e-20;6!UBERON:0001768;2.67e-20;6!UBERON:0002200;2.67e-20;6!UBERON:0001778;1.77e-18;3!UBERON:0001775;1.77e-18;3!UBERON:0010371;8.53e-15;31!UBERON:0002506;1.72e-14;1!UBERON:0001769;1.72e-14;1!UBERON:0001052;4.11e-14;4!UBERON:0001444;9.37e-12;48!UBERON:0004907;1.76e-11;5!UBERON:0006876;2.30e-11;11!UBERON:0000033;7.95e-11;50!UBERON:0001801;4.74e-09;14!UBERON:0007811;8.51e-08;52!UBERON:0000473;1.25e-07;8!UBERON:0000153;1.28e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.45e-43,11;UBERON:0001782,3.86e-41,3;UBERON:0005424,3.86e-41,3;UBERON:0000966,2.73e-36,6;UBERON:0005388,2.73e-36,6;UBERON:0001802,2.73e-36,6;UBERON:0000019,4.08e-32,20;UBERON:0000047,4.08e-32,20;UBERON:0010312,4.08e-32,20;UBERON:0004088,4.08e-32,20;UBERON:0010230,4.08e-32,20;UBERON:0003072,4.08e-32,20;UBERON:0004128,4.08e-32,20;UBERON:0003071,4.08e-32,20;UBERON:0001781,4.66e-31,4;UBERON:0000970,1.44e-30,21;UBERON:0002104,1.44e-30,21;UBERON:0000488,4.28e-30,4;UBERON:0001456,3.67e-29,22;UBERON:0000020,1.06e-26,24;UBERON:0001032,1.06e-26,24;UBERON:0004456,1.06e-26,24;UBERON:0005085,1.42e-20,31;UBERON:0002203,2.59e-20,6;UBERON:0001768,2.59e-20,6;UBERON:0002200,2.59e-20,6;UBERON:0001778,1.48e-18,3;UBERON:0001775,1.48e-18,3;UBERON:0002506,2.11e-14,1;UBERON:0001769,2.11e-14,1;UBERON:0001052,2.58e-14,4;UBERON:0001444,7.79e-13,49;UBERON:0004907,1.21e-11,5;UBERON:0006876,2.26e-11,11;UBERON:0000033,3.66e-11,56;UBERON:0000153,4.99e-10,62;UBERON:0007811,4.99e-10,62;UBERON:0003056,4.99e-10,61;UBERON:0001801,4.68e-09,14;UBERON:0000473,1.45e-07,8;UBERON:0003075,2.43e-07,82;UBERON:0007284,2.43e-07,82;UBERON:0002346,5.64e-07,86 | |||
|phase1_expression=0,0.428201047781966,0.422863212287913,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32348744029695,0.886917589850256,1.40535657109002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.731842236777572,0.265059536642971,0.348581828608555,0,0.252320850875628,1.09493207722749,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.55146986366197,0.435758888184812,0,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,1.20097467208968,0,0,0,0,0,0,0,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,9.23220450419001,3.28014645699706,2.92840555197873,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61394733071642,0.179515288819544,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55488378577335,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,1.28767814440971,0,0,0,0,0.393915911536118,0.576911008668165,0.741438982396034,0,0,0,0,0.643012593860077,0.137539436597234,0,0.449947783103001,0,0,0,0,0.314727528809989,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.919036730290385,0.655745261419609,0.314108192500469,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,1.96190514319652,0,0,0,2.93053831124291,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.615976841137482,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,5.09944148709909,0.801652215796681,1.01084389488329,0.50141507858475,0.151557396436479,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:68301840..68301845,+ | |||
}} |
Revision as of 12:00, 20 January 2014
Short description: | p@chr16:68301840..68301845, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:68301840..68301845, + |
Coexpression cluster: | C839_Retinal_Mallassezderived_retina_medulla_mesothelioma_osteosarcoma_Saos2 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 3.86e-41 | 3 |
visual pigment cell | 4.66e-31 | 4 |
ciliated cell | 1.48e-18 | 3 |
ciliated epithelial cell | 1.48e-18 | 3 |
multi-ciliated epithelial cell | 1.48e-18 | 3 |
non-pigmented ciliary epithelial cell | 1.48e-18 | 3 |
germ line cell | 1.10e-17 | 7 |
germ cell | 1.10e-17 | 7 |
pigment cell | 1.22e-15 | 14 |
pigment cell (sensu Vertebrata) | 2.11e-14 | 1 |
iris pigment epithelial cell | 2.11e-14 | 1 |
epithelial cell of large intestine | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.03e-08 | 2 |