FFCP PHASE1:Hg19::chr17:2466701..2466728,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:2466701..2466728,+ | |||
|id=chr17:2466701..2466728,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.23e-29!43;CL:0000223!3.84e-22!59;CL:0002251!4.83e-19!21;CL:0002159!9.42e-18!13;CL:0000622!4.12e-16!5;CL:0000066!7.29e-16!254;CL:0002368!2.91e-14!13;CL:0000154!2.33e-13!6;CL:0002621!2.47e-10!3;CL:0002166!3.26e-10!3;CL:0002623!4.16e-10!3;CL:0002077!6.21e-09!33;CL:0000150!9.22e-09!9;CL:0000076!1.13e-08!62;CL:0000220!2.28e-08!246;CL:0002321!3.13e-08!248;CL:0000317!1.05e-07!2;CL:1000448!1.05e-07!2;CL:0002308!1.05e-07!2;CL:0002140!1.05e-07!2;CL:0000221!8.55e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000317;8.17e-26;2!CL:1000448;8.17e-26;2!CL:0002308;8.17e-26;2!CL:0002140;8.17e-26;2!CL:0000622;3.47e-23;5!CL:0002251;3.76e-22;20!CL:0000154;1.94e-19;6!CL:0002076;6.67e-18;42!CL:0002621;1.86e-17;3!CL:0000150;3.59e-13;9!CL:0002159;1.51e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,6.76e-26,2;CL:1000448,6.76e-26,2;CL:0002308,6.76e-26,2;CL:0002140,6.76e-26,2;CL:0000622,3.22e-23,5;CL:0002076,5.50e-23,42;CL:0002251,3.90e-22,20;CL:0000223,2.68e-20,58;CL:0000154,1.82e-19,6;CL:0002621,1.94e-17,3;CL:0000150,3.44e-13,9;CL:0000066,2.54e-09,253;CL:0002159,1.38e-08,14;CL:0000076,7.76e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;3.02e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!3.31e-16!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.18e-14;14!DOID:4074;1.16e-07;2!DOID:4905;1.16e-07;2!DOID:3498;1.16e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.14e-14,14;DOID:4074,1.20e-07,2;DOID:4905,1.20e-07,2;DOID:3498,1.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.57e-16!72;UBERON:0000161!7.05e-16!35;UBERON:0000166!1.59e-15!21;UBERON:0000974!7.09e-14!10;UBERON:0000165!3.39e-13!28;UBERON:0000930!3.39e-13!28;UBERON:0004119!1.09e-11!169;UBERON:0000925!1.09e-11!169;UBERON:0006595!1.09e-11!169;UBERON:0001444!1.25e-10!48;UBERON:0003408!1.97e-10!10;UBERON:0001949!2.47e-10!3;UBERON:0003729!3.17e-10!5;UBERON:0003102!9.65e-10!95;UBERON:0001044!1.72e-08!6;UBERON:0003293!1.72e-08!6;UBERON:0003294!1.72e-08!6;UBERON:0010047!1.72e-08!6;UBERON:0000167!1.72e-08!6;UBERON:0000344!2.90e-08!12;UBERON:0000153!6.44e-08!129;UBERON:0007811!6.44e-08!129;UBERON:0001007!6.84e-08!155;UBERON:0001555!6.84e-08!155;UBERON:0007026!6.84e-08!155;UBERON:0001708!9.56e-08!4;UBERON:0001704!9.56e-08!4;UBERON:0002419!1.05e-07!2;UBERON:0007771!1.05e-07!2;UBERON:0003297!1.05e-07!2;UBERON:0001821!1.05e-07!2;UBERON:0003487!1.05e-07!2;UBERON:0001820!1.05e-07!2;UBERON:0005089!1.05e-07!2;UBERON:0005088!1.05e-07!2;UBERON:0003343!1.12e-07!4;UBERON:0004785!1.12e-07!4;UBERON:0002530!9.29e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;8.17e-26;2!UBERON:0007771;8.17e-26;2!UBERON:0003297;8.17e-26;2!UBERON:0001821;8.17e-26;2!UBERON:0003487;8.17e-26;2!UBERON:0001820;8.17e-26;2!UBERON:0001949;1.86e-17;3!UBERON:0000161;1.73e-16;19!UBERON:0000166;1.73e-16;19!UBERON:0003729;1.15e-15;13!UBERON:0003343;1.26e-13;4!UBERON:0004785;1.26e-13;4!UBERON:0000165;3.52e-11;28!UBERON:0000344;2.82e-10;20!UBERON:0000974;2.16e-09;6!UBERON:0003929;5.19e-08;7!UBERON:0006562;1.99e-07;2!UBERON:0003350;4.08e-07;8!UBERON:0001828;4.08e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,6.76e-26,2;UBERON:0007771,6.76e-26,2;UBERON:0003297,6.76e-26,2;UBERON:0001821,6.76e-26,2;UBERON:0003487,6.76e-26,2;UBERON:0001820,6.76e-26,2;UBERON:0005089,6.76e-26,2;UBERON:0005088,6.76e-26,2;UBERON:0001949,1.94e-17,3;UBERON:0003729,1.13e-15,13;UBERON:0000166,3.07e-14,22;UBERON:0003343,1.18e-13,4;UBERON:0004785,1.18e-13,4;UBERON:0000161,3.69e-12,36;UBERON:0000165,8.60e-11,29;UBERON:0000930,8.60e-11,29;UBERON:0000344,2.79e-10,20;UBERON:0003102,3.62e-09,99;UBERON:0001004,9.75e-08,74;UBERON:0000033,1.02e-07,56;UBERON:0003350,4.15e-07,8;UBERON:0001828,4.15e-07,8;UBERON:0000153,6.20e-07,62;UBERON:0007811,6.20e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,0.545492241181669,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768251997860379,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.671928512795438,0.708875486211932,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,3.90036147621913,0,0,0,0,0,0,0,0,0,1.98341898433174,0.960950336825531,7.65676274967505,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04828206913899,0,0,0,0,0,0,0,0,0,0,0,0,1.25481369850743,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7176277597097,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0.999843263696853,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.41664733254615,0.11796972334774,2.38457178078183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0,0.47404083519818,0,0,0,0.414432328326074,0.6828739083758,4.14755797088455,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,2.85686301769052,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0.426467963801962,0.23806443146374,0.258355639344024,0.620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:2466701..2466728,+ | |||
}} |
Revision as of 13:06, 20 January 2014
Short description: | p@chr17:2466701..2466728, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:2466701..2466728, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 6.76e-26 | 2 |
epithelial cell of sweat gland | 6.76e-26 | 2 |
epithelial cell of skin gland | 6.76e-26 | 2 |
acinar cell of sebaceous gland | 6.76e-26 | 2 |
acinar cell | 3.22e-23 | 5 |
endo-epithelial cell | 5.50e-23 | 42 |
epithelial cell of alimentary canal | 3.90e-22 | 20 |
endodermal cell | 2.68e-20 | 58 |
protein secreting cell | 1.82e-19 | 6 |
gingival epithelial cell | 1.94e-17 | 3 |
glandular epithelial cell | 3.44e-13 | 9 |
epithelial cell | 2.54e-09 | 253 |
general ecto-epithelial cell | 1.38e-08 | 14 |
squamous epithelial cell | 7.76e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin gland | 6.76e-26 | 2 |
epidermis gland | 6.76e-26 | 2 |
gland of integumental system | 6.76e-26 | 2 |
sebaceous gland | 6.76e-26 | 2 |
skin sebaceous gland | 6.76e-26 | 2 |
sweat gland | 6.76e-26 | 2 |
sweat gland placode | 6.76e-26 | 2 |
sebaceous gland placode | 6.76e-26 | 2 |
gingival epithelium | 1.94e-17 | 3 |
mouth mucosa | 1.13e-15 | 13 |
oral opening | 3.07e-14 | 22 |
mucosa of oral region | 1.18e-13 | 4 |
respiratory system mucosa | 1.18e-13 | 4 |
orifice | 3.69e-12 | 36 |
mouth | 8.60e-11 | 29 |
stomodeum | 8.60e-11 | 29 |
mucosa | 2.79e-10 | 20 |
surface structure | 3.62e-09 | 99 |
respiratory system | 9.75e-08 | 74 |
head | 1.02e-07 | 56 |
epithelium of mucosa | 4.15e-07 | 8 |
gingiva | 4.15e-07 | 8 |
anterior region of body | 6.20e-07 | 62 |
craniocervical region | 6.20e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.14e-14 | 14 |
pancreas adenocarcinoma | 1.20e-07 | 2 |
pancreatic carcinoma | 1.20e-07 | 2 |
pancreatic ductal adenocarcinoma | 1.20e-07 | 2 |