FFCP PHASE1:Hg19::chr17:20824400..20824414,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=62bp_to_ENST00000443508_5end | |||
|description=CAGE_peak_4_at_ENST00000443508_5end | |||
|id=chr17:20824400..20824414,+ | |||
|ontology_enrichment_celltype=CL:0000064!1.31e-09!3;CL:0005012!1.31e-09!3;CL:0000067!1.31e-09!3;CL:0002304!1.31e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000222;2.09e-23;1!CL:0002568;4.10e-23;1!CL:0002569;1.09e-15;6!CL:0000054;2.90e-12;2!CL:0000137;2.90e-12;2!CL:0000092;2.90e-12;2!CL:0002166;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,5.13e-23,1;CL:0002569,1.22e-15,6;CL:0000054,3.62e-12,2;CL:0000137,3.62e-12,2;CL:0000092,3.62e-12,2;CL:0002166,1.30e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;4.10e-23;1!DOID:3451;2.90e-12;2!DOID:4159;2.90e-12;2!DOID:0060122;2.90e-12;2!DOID:200;2.90e-12;2!DOID:4305;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.28e-23,1;DOID:3451,2.59e-12,2;DOID:4159,2.59e-12,2;DOID:0060122,2.59e-12,2;DOID:200,3.62e-12,2;DOID:4305,3.62e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000488!7.92e-12!4;UBERON:0001778!1.31e-09!3;UBERON:0001775!1.31e-09!3;UBERON:0007625!7.83e-09!11;UBERON:0002203!7.09e-08!6;UBERON:0001768!7.09e-08!6;UBERON:0003688!1.07e-07!6;UBERON:0002358!1.07e-07!6;UBERON:0003684!1.07e-07!6;UBERON:0001178!1.07e-07!6;UBERON:0001456!2.73e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;4.10e-23;1!UBERON:0002331;1.33e-20;10!UBERON:0003422;1.09e-15;6!UBERON:0003104;1.35e-13;7!UBERON:0009142;1.35e-13;7!UBERON:0000478;5.50e-09;24!UBERON:0000014;9.10e-07;4!UBERON:0001708;9.10e-07;4!UBERON:0008895;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.62e-23,1;UBERON:0002331,1.47e-20,10;UBERON:0000358,1.47e-20,10;UBERON:0000307,1.47e-20,10;UBERON:0000091,1.47e-20,10;UBERON:0000087,1.47e-20,10;UBERON:0007010,1.47e-20,10;UBERON:0007806,1.47e-20,10;UBERON:0008780,1.47e-20,10;UBERON:0005728,1.47e-20,10;UBERON:0003422,1.22e-15,6;UBERON:0000478,5.73e-09,24;UBERON:0000014,8.61e-07,4;UBERON:0001708,9.11e-07,4;UBERON:0008895,9.11e-07,4 | |||
|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,1.17587489739202,0.283550194484773,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,3.11512312139057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,3.27259784006895,0,1.55519793830904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.418411385249333,0,0,0,0,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,4.69281884806909,1.58913877437726,0,0,0,0 | |||
|short_description=p4@ENST00000443508 | |||
}} |
Revision as of 14:16, 20 January 2014
Short description: | p4@ENST00000443508 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000443508_5end |
Coexpression cluster: | NA |
Association with transcript: | 62bp_to_ENST00000443508_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 5.13e-23 | 1 |
mesenchymal stem cell of umbilical cord | 1.22e-15 | 6 |
bone matrix secreting cell | 3.62e-12 | 2 |
osteocyte | 3.62e-12 | 2 |
osteoclast | 3.62e-12 | 2 |
epithelial cell of Malassez | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 2.62e-23 | 1 |
umbilical cord | 1.47e-20 | 10 |
blastocyst | 1.47e-20 | 10 |
blastula | 1.47e-20 | 10 |
bilaminar disc | 1.47e-20 | 10 |
inner cell mass | 1.47e-20 | 10 |
cleaving embryo | 1.47e-20 | 10 |
connecting stalk | 1.47e-20 | 10 |
inner cell mass derived epiblast | 1.47e-20 | 10 |
extraembryonic mesoderm | 1.47e-20 | 10 |
mesenchyme of umbilical cord | 1.22e-15 | 6 |
extraembryonic structure | 5.73e-09 | 24 |
zone of skin | 8.61e-07 | 4 |
jaw skeleton | 9.11e-07 | 4 |
splanchnocranium | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.28e-23 | 1 |
skin carcinoma | 2.59e-12 | 2 |
skin cancer | 2.59e-12 | 2 |
integumentary system cancer | 2.59e-12 | 2 |
giant cell tumor | 3.62e-12 | 2 |
bone giant cell tumor | 3.62e-12 | 2 |