FFCP PHASE1:Hg19::chr17:39659613..39659636,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt=A4FUA1 | |||
|association_with_transcript=-360bp_to_BC113044_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_BC113044_5end | |||
|id=chr17:39659613..39659636,- | |||
|ontology_enrichment_celltype=CL:0002334!2.13e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000632;3.79e-11;3!CL:0000511;3.18e-09;1!CL:0002625;3.18e-09;1!CL:0000216;3.18e-09;1!CL:0002581;4.03e-09;1!CL:0002616;4.03e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,5.43e-11,3;CL:0000511,3.05e-09,1;CL:0002625,3.05e-09,1;CL:0000216,3.05e-09,1;CL:0002581,3.58e-09,1;CL:0002616,3.88e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-09;1!UBERON:0004874;7.55e-09;1!UBERON:0005795;1.53e-07;10 | |||
|ontology_enrichment_disease=DOID:2394!2.85e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:4235;7.55e-09;1!DOID:3571;7.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,1.07e-08,1;DOID:3571,1.16e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003133!3.52e-12!48;UBERON:0005156!1.46e-11!59;UBERON:0000990!1.46e-11!59;UBERON:0004176!5.78e-10!22;UBERON:0000974!3.42e-09!10;UBERON:0000991!1.57e-08!21;UBERON:0009196!1.57e-08!21;UBERON:0009117!1.57e-08!21;UBERON:0005564!1.57e-08!21;UBERON:0003134!6.63e-08!37;UBERON:0000474!6.63e-08!37;UBERON:0001042!4.21e-07!10;UBERON:0009145!4.21e-07!10;UBERON:0005406!4.87e-07!2;UBERON:0003100!6.95e-07!41;UBERON:0000341!8.13e-07!2;UBERON:0002323!9.68e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.60e-16;2!UBERON:0001723;9.27e-12;3!UBERON:0001033;9.27e-12;3!UBERON:0005795;2.04e-09;1!UBERON:0002372;2.82e-09;1!UBERON:0001961;2.82e-09;1!UBERON:0001744;2.82e-09;1!UBERON:0001042;2.82e-09;1!UBERON:0001735;2.82e-09;1!UBERON:0001136;3.18e-09;1!UBERON:0001343;3.18e-09;1!UBERON:0004910;3.18e-09;1!UBERON:0004813;3.18e-09;1!UBERON:0006834;7.55e-09;1!UBERON:0000989;7.55e-09;1!UBERON:0008811;7.55e-09;1!UBERON:0000995;1.59e-07;17!UBERON:0003975;4.12e-07;18!UBERON:0003135;8.91e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.37e-16,2;UBERON:0001042,6.39e-13,10;UBERON:0009145,6.39e-13,10;UBERON:0005795,2.71e-12,22;UBERON:0006562,9.24e-12,11;UBERON:0001723,9.28e-12,3;UBERON:0001033,9.28e-12,3;UBERON:0010056,9.28e-12,3;UBERON:0002372,2.82e-09,1;UBERON:0001961,2.82e-09,1;UBERON:0001744,2.82e-09,1;UBERON:0001735,2.82e-09,1;UBERON:0001136,3.05e-09,1;UBERON:0001343,3.05e-09,1;UBERON:0004910,3.05e-09,1;UBERON:0005154,3.05e-09,1;UBERON:0005295,3.05e-09,1;UBERON:0004813,3.05e-09,1;UBERON:0005297,3.05e-09,1;UBERON:0005294,3.05e-09,1;UBERON:0010141,3.05e-09,1;UBERON:0005891,3.05e-09,1;UBERON:0003133,3.47e-09,48;UBERON:0000995,4.38e-09,21;UBERON:0000989,6.72e-09,1;UBERON:0008811,6.72e-09,1;UBERON:0006258,6.72e-09,1;UBERON:0005876,6.72e-09,1;UBERON:0004874,6.72e-09,1;UBERON:0006834,7.27e-09,1;UBERON:0003975,1.16e-08,22;UBERON:0004175,1.34e-07,25;UBERON:0005156,2.84e-07,59;UBERON:0000990,2.84e-07,59;UBERON:0004876,6.92e-07,11;UBERON:0001557,7.43e-07,19;UBERON:0003135,8.82e-07,11 | |||
|phase1_expression=0,0,0.281908808191942,0,0,2.61701557230111,0,0,0,0,4.18680700783456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,0,0,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,1.66435439510497,0,0.248107807818777,0,0,0.128139149255701,0,1.44768529029247,2.96836132889982,0.154209693802656,0.177561725313127,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,7.94715342388039,6.30992119731136,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0.34945333648406,0,0,0,0,26.7689685508038,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.76280561296425,0,2.5926644736038,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0.450772826991655,0.761610424337591,0.813741466409323,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865253124247578,0,0,0,0,0,0,0,1.36401656792831,0.267964130156178,0,0,28.9998215385334,0.476128862927481,0.129177819672012,1.92431614317159,0,0,0,31.7866451929564,10.6092323336437,5.65757245322535,0.860666464712116,0.665320713092027,0,0,0,0,0,1.4668973301944,12.2068853494722,0,0,0 | |||
|short_description=p1@BC113044 | |||
}} |
Revision as of 15:17, 20 January 2014
Short description: | p1@BC113044 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC113044_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -360bp_to_BC113044_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 5.43e-11 | 3 |
androgen binding protein secreting cell | 3.05e-09 | 1 |
seminiferous tubule epithelial cell | 3.05e-09 | 1 |
Sertoli cell | 3.05e-09 | 1 |
perirenal preadipocyte | 3.58e-09 | 1 |
perirenal adipocyte cell | 3.88e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 1.07e-08 | 1 |
liver cancer | 1.16e-08 | 1 |