FFCP PHASE1:Hg19::chr17:39780819..39780835,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6427 | |||
|TSSclassifier=strong | |||
|UniProt=Q04695 | |||
|association_with_transcript=0bp_to_ENST00000311208,ENST00000491673_5end | |||
|coexpression_cluster_id=C544 | |||
|description=CAGE_peak_1_at_KRT17_5end | |||
|id=chr17:39780819..39780835,- | |||
|ontology_enrichment_celltype=CL:0000066!3.30e-25!254;CL:0002076!6.33e-18!43;CL:0000223!2.41e-13!59;CL:0002368!1.37e-10!13;CL:0002251!2.25e-08!21;CL:0002159!2.28e-08!13;CL:0002202!4.51e-07!9;CL:0002632!4.51e-07!9;CL:0002077!5.96e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.89e-16;42!CL:0002368;2.89e-14;13!CL:0002251;1.62e-10;20!CL:0002202;2.09e-09;9!CL:0002632;2.09e-09;9!CL:0002159;4.70e-09;14!CL:0000622;1.08e-07;5!CL:0000244;6.13e-07;4!CL:0000731;6.13e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.48e-26,253;CL:0002076,3.37e-22,42;CL:0000223,1.84e-15,58;CL:0002368,2.81e-14,13;CL:0002251,1.62e-10,20;CL:0002202,2.03e-09,9;CL:0002632,2.03e-09,9;CL:0002159,4.66e-09,14;CL:0000622,1.08e-07,5;CL:0000244,6.14e-07,4;CL:0000731,6.14e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;4.09e-08;58!UBERON:0008947;4.39e-07;29 | |||
|ontology_enrichment_disease=DOID:305!4.16e-10!106;DOID:1749!2.89e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.01e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.02e-11,14;DOID:305,2.63e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.58e-18!72;UBERON:0000065!3.48e-14!53;UBERON:0004119!3.62e-14!169;UBERON:0000925!3.62e-14!169;UBERON:0006595!3.62e-14!169;UBERON:0000072!3.29e-10!46;UBERON:0000077!6.56e-10!130;UBERON:0008947!7.21e-10!38;UBERON:0003258!7.21e-10!38;UBERON:0005631!1.18e-09!14;UBERON:0000158!1.18e-09!14;UBERON:0000062!3.78e-09!511;UBERON:0000161!7.66e-09!35;UBERON:0001007!9.13e-09!155;UBERON:0001555!9.13e-09!155;UBERON:0007026!9.13e-09!155;UBERON:0001737!1.01e-08!9;UBERON:0001557!1.06e-08!19;UBERON:0001041!2.39e-08!98;UBERON:0000166!3.14e-08!21;UBERON:0004921!1.95e-07!129;UBERON:0004185!1.95e-07!129;UBERON:0000922!5.81e-07!612;UBERON:0007196!8.38e-07!14;UBERON:0001558!8.38e-07!14;UBERON:0003124!9.11e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;9.25e-12;44!UBERON:0001737;1.90e-11;9!UBERON:0001557;1.90e-11;9!UBERON:0001004;3.99e-10;65!UBERON:0000161;8.09e-09;19!UBERON:0000166;8.09e-09;19!UBERON:0000072;2.71e-08;37!UBERON:0000165;4.04e-08;28!UBERON:0000365;8.64e-08;5!UBERON:0007196;1.73e-07;15!UBERON:0001558;1.73e-07;15!UBERON:0005631;1.91e-07;10!UBERON:0000158;1.91e-07;10!UBERON:0001044;3.31e-07;6!UBERON:0003293;3.31e-07;6!UBERON:0003294;3.31e-07;6!UBERON:0010047;3.31e-07;6!UBERON:0003408;3.31e-07;6!UBERON:0000167;3.31e-07;6!UBERON:0001041;5.26e-07;14!UBERON:0000486;6.77e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.82e-22,74;UBERON:0004119,3.65e-21,160;UBERON:0000925,3.65e-21,160;UBERON:0006595,3.65e-21,160;UBERON:0000065,2.46e-17,54;UBERON:0001041,2.16e-14,87;UBERON:0001007,9.08e-14,145;UBERON:0001555,9.08e-14,145;UBERON:0007026,9.08e-14,145;UBERON:0004921,1.86e-12,118;UBERON:0008947,2.86e-12,38;UBERON:0003258,2.86e-12,38;UBERON:0001557,3.45e-12,19;UBERON:0000072,4.52e-12,47;UBERON:0005631,1.49e-11,14;UBERON:0000158,1.49e-11,14;UBERON:0001737,1.91e-11,9;UBERON:0000161,5.14e-10,36;UBERON:0000166,7.20e-10,22;UBERON:0003124,9.38e-09,7;UBERON:0000365,8.59e-08,5;UBERON:0000165,1.09e-07,29;UBERON:0000930,1.09e-07,29;UBERON:0000153,1.13e-07,62;UBERON:0007811,1.13e-07,62;UBERON:0007196,1.70e-07,15;UBERON:0001558,1.70e-07,15;UBERON:0001044,3.31e-07,6;UBERON:0003293,3.31e-07,6;UBERON:0003294,3.31e-07,6;UBERON:0010047,3.31e-07,6;UBERON:0000167,3.31e-07,6;UBERON:0003102,5.37e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,223.372148279872,105.367976363837,96.5510864815361,107.616927117209,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,3.8704030829019,1248.57402284238,1227.11291310259,741.356790384409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,31.9338555477587,51.2321413058201,32.3980654947362,1.72372840368309,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0.962787081228281,0.639337125799041,3.95821560224059,23.5367115993526,10.6556187633174,0,0.56738522469114,0,22.1098825425934,33.3749067788929,20.6329402469861,4.23779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.434539556882471,0.795285947051099,3.40644409211845,0,0.443458794925128,0.43917392846563,0.589405839739707,854.272451046011,1644.42900374894,0.649094787309367,0.522389211897802,1.19662164466979,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,1.95249646038536,0,0,0,0,0,0,0,0.183201743930407,0,0,2439.07403363319,0,0,0.132409180813219,0,3.19201543978521,5.04609840128076,0,0,0,0,0,0,0,0,0,33.6578374711225,0,0,0.647491777472526,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,748.499284301449,648.863020885596,307.454526257012,0.121973706129595,0,0,0.621966330092223,0,0,0,0,0,0,0,243.830314882118,202.133043403644,232.57564383756,290.293736231661,225.287345191548,254.591374306207,263.999701377602,215.254947242505,240.082225934548,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,3495.98559140636,22.4803506515239,198.745778457794,774.872697531734,0.977424915930974,0,0,0.115930404975077,4.93116515790451,0,0,0,0,0,0,0,0,467.731831594017,922.557848068137,747.863637953589,472.152531689416,747.51048985791,666.702479068302,0,0,0,0.720599767084807,0.12624243342638,2.09543051164158,0,0,39.3466625852222,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,1.50051156317903,0,0.831883446123229,0,0.630809660135739,0,0,0,13.4514992680256,0,1.29058417979192,0,0,0,0,0,0,1917.58501696904,432.732142727292,302.087903036351,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,329.6326371786,1601.28839759524,0,0,1.04899531967539,7.21919380651859,6.85436500229291,0,0,0.211103257785751,0,0,1.72732732881711,0,0,0,0,0,1.11937377361089,0,0,0,0.328014645699706,1.95227036798582,0.9273691048295,0,0,762.624634458917,1582.24663885289,0,0.096670718292122,0,0,0,0,0,0.340906509664404,0,1337.6508200164,726.478454640101,515.682971190614,367.202744505646,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,1.8589409885985,0,0,0,0,0,0.211107635297664,0,0,0,1548.98357065529,447.09161778237,831.927124340505,0.753150406214233,1353.93939705102,2109.26287535867,2330.66888698877,574.99767071802,0,0,0,0,0,0,0,0,0.106824071127473,0,33.3254693734203,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,323.976265789045,58.2050774431972,357.227896541407,0,0,0,0,12.4563990795516,4.78195171802567,0,0.251932747854276,0.20453736500431,0,0,2.06697207638852,36.6993408084999,0,6.21453455512682,0,0,0,0,0,0.260427761085233,0,12.3249927823915,28.6759489679459,1.5255219017566,0,0,0,0.347249989866585,0,0,0,0,0,0.438770794307945,49.5670009011405,755.537270245751,1.76985594558733,51.5018092428445,0,1.6156375993759,0.434589487688032,96.6573513987716,28.3036563611755,43.708851633528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,0,21.5231080825299,0,1.18375320854817,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0.138674673013139,12.4963011601294,82.0196366358341,293.998940622019,1.04836000945218,0,78.372628344159,35.5214081038862,59.1231290783106,5.23740689037465,0,4.29363407483012,0,0,0,30.3104643238945,71.5818264846196,0.213452994739353,113.891477461814,0,0,0,0.14405479798815,0,519.2339582608,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.268733889946905,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,4.94942561413301,14.702237136601,0.0607495566580247,446.128134507024,0.157611414598396,0.681909645754975,0.105600336519406,0,339.689899255418,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,2.66968531419237,2.35806457649499,1.24271716604159,0,0.197611631897944,0,294.275319832054,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,1.8747061194316,0,0,0.705797459094515,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,1.19428766609585,0,0,0,1.26184898228651,0.57785949122191,0,7.56883446699114,0,0,0.489473409012935,0.895444205407437,12.9696607807608,0,0,0.192914038270915,0,0,9.32661922674236,0,0,0,0,1.96278473107013,12.1215644073173,2.45772908753719,5.4941152073243,0,0.106691729694141,4.99423441016365,0,0,3622.87924993361,1441.97508875643,0,0,0,0,0,0,22.8041806236564,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0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| |||
|short_description=p1@KRT17 | |||
}} |
Revision as of 15:20, 20 January 2014
Short description: | p1@KRT17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT17_5end |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | 0bp_to_ENST00000311208, ENST00000491673_5end |
EntrezGene: | KRT17 |
HGNC: | 6427 |
UniProt: | Q04695 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.48e-26 | 253 |
endo-epithelial cell | 3.37e-22 | 42 |
endodermal cell | 1.84e-15 | 58 |
respiratory epithelial cell | 2.81e-14 | 13 |
epithelial cell of alimentary canal | 1.62e-10 | 20 |
epithelial cell of tracheobronchial tree | 2.03e-09 | 9 |
epithelial cell of lower respiratory tract | 2.03e-09 | 9 |
general ecto-epithelial cell | 4.66e-09 | 14 |
acinar cell | 1.08e-07 | 5 |
transitional epithelial cell | 6.14e-07 | 4 |
urothelial cell | 6.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 5.82e-22 | 74 |
endoderm-derived structure | 3.65e-21 | 160 |
endoderm | 3.65e-21 | 160 |
presumptive endoderm | 3.65e-21 | 160 |
respiratory tract | 2.46e-17 | 54 |
foregut | 2.16e-14 | 87 |
digestive system | 9.08e-14 | 145 |
digestive tract | 9.08e-14 | 145 |
primitive gut | 9.08e-14 | 145 |
subdivision of digestive tract | 1.86e-12 | 118 |
respiratory primordium | 2.86e-12 | 38 |
endoderm of foregut | 2.86e-12 | 38 |
upper respiratory tract | 3.45e-12 | 19 |
segment of respiratory tract | 4.52e-12 | 47 |
extraembryonic membrane | 1.49e-11 | 14 |
membranous layer | 1.49e-11 | 14 |
larynx | 1.91e-11 | 9 |
orifice | 5.14e-10 | 36 |
oral opening | 7.20e-10 | 22 |
chorion | 9.38e-09 | 7 |
urothelium | 8.59e-08 | 5 |
mouth | 1.09e-07 | 29 |
stomodeum | 1.09e-07 | 29 |
anterior region of body | 1.13e-07 | 62 |
craniocervical region | 1.13e-07 | 62 |
tracheobronchial tree | 1.70e-07 | 15 |
lower respiratory tract | 1.70e-07 | 15 |
saliva-secreting gland | 3.31e-07 | 6 |
gland of oral region | 3.31e-07 | 6 |
gland of foregut | 3.31e-07 | 6 |
oral gland | 3.31e-07 | 6 |
oral cavity | 3.31e-07 | 6 |
surface structure | 5.37e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.02e-11 | 14 |
carcinoma | 2.63e-09 | 106 |