FFCP PHASE1:Hg19::chr17:63533993..63534003,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_at_chr17:63533993..63534003,- | |||
|id=chr17:63533993..63534003,- | |||
|ontology_enrichment_celltype=CL:0002541!1.23e-16!3;CL:0002620!1.10e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.98e-30;3!CL:0000039;1.27e-13;7!CL:0000586;1.27e-13;7!CL:0000123;3.06e-12;2!CL:0000242;3.06e-12;2!CL:0000322;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.30e-30,3;CL:0000039,1.23e-13,7;CL:0000586,1.23e-13,7;CL:0000242,3.62e-12,2;CL:0000322,1.40e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.62e-18;5!DOID:450;1.62e-18;5!DOID:66;1.62e-18;5!DOID:423;1.62e-18;5!DOID:0080000;1.62e-18;5!DOID:11722;1.62e-18;5!DOID:3910;3.06e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.35e-18,5;DOID:450,1.35e-18,5;DOID:66,1.35e-18,5;DOID:423,1.35e-18,5;DOID:0080000,1.35e-18,5;DOID:11722,1.35e-18,5;DOID:3910,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.23e-16!3;UBERON:0000920!1.23e-16!3;UBERON:0005631!4.42e-13!14;UBERON:0000158!4.42e-13!14;UBERON:0003124!1.93e-12!7;UBERON:0000478!2.24e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.98e-30;3!UBERON:0000920;1.98e-30;3!UBERON:0004903;3.06e-12;2!UBERON:0002173;3.06e-12;2!UBERON:0002186;3.06e-12;2!UBERON:0005631;7.40e-10;10!UBERON:0000158;7.40e-10;10!UBERON:0004821;1.35e-08;3!UBERON:0007499;1.35e-08;3!UBERON:0003215;1.35e-08;3!UBERON:0010368;1.35e-08;3!UBERON:0009911;1.35e-08;3!UBERON:0002299;1.35e-08;3!UBERON:0006524;1.35e-08;3!UBERON:0008874;1.35e-08;3!UBERON:0002169;1.35e-08;3!UBERON:0004894;1.35e-08;3!UBERON:0009856;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.30e-30,3;UBERON:0003124,1.23e-13,7;UBERON:0004903,3.24e-12,2;UBERON:0002173,3.24e-12,2;UBERON:0002186,3.24e-12,2;UBERON:0004821,1.40e-08,3;UBERON:0003215,1.40e-08,3;UBERON:0010368,1.40e-08,3;UBERON:0009911,1.40e-08,3;UBERON:0002299,1.40e-08,3;UBERON:0006524,1.40e-08,3;UBERON:0008874,1.40e-08,3;UBERON:0002169,1.40e-08,3;UBERON:0004894,1.40e-08,3;UBERON:0005631,2.77e-07,14;UBERON:0000158,2.77e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80054657650641,2.67936576019941,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0.47748896947538,0.296964680832639,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0,0.569710279235006,20.9813152993135,1.79515288819544,0,3.19001159731919,0.0915975934018623,2.66517388009317,0,0,0,0,0,0.335643173951685,0,0,0.632994193584081,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,3.55063448114339,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:63533993..63534003,- | |||
}} |
Revision as of 16:52, 20 January 2014
Short description: | p@chr17:63533993..63534003, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:63533993..63534003, - |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.30e-30 | 3 |
germ line cell | 1.23e-13 | 7 |
germ cell | 1.23e-13 | 7 |
Merkel cell | 3.62e-12 | 2 |
pneumocyte | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.30e-30 | 3 |
chorion | 1.23e-13 | 7 |
bronchoalveolar duct junction | 3.24e-12 | 2 |
alveolar duct | 3.24e-12 | 2 |
bronchiole | 3.24e-12 | 2 |
pulmonary alveolus epithelium | 1.40e-08 | 3 |
alveolus | 1.40e-08 | 3 |
pulmonary lobule | 1.40e-08 | 3 |
lobule | 1.40e-08 | 3 |
alveolus of lung | 1.40e-08 | 3 |
alveolar system | 1.40e-08 | 3 |
pulmonary acinus | 1.40e-08 | 3 |
alveolar sac | 1.40e-08 | 3 |
alveolar wall | 1.40e-08 | 3 |
extraembryonic membrane | 2.77e-07 | 14 |
membranous layer | 2.77e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.35e-18 | 5 |
myotonic disease | 1.35e-18 | 5 |
muscle tissue disease | 1.35e-18 | 5 |
myopathy | 1.35e-18 | 5 |
muscular disease | 1.35e-18 | 5 |
myotonic dystrophy | 1.35e-18 | 5 |
lung adenocarcinoma | 3.24e-12 | 2 |