FFCP PHASE1:Hg19::chr17:72931942..72931981,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347741 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19658 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=128bp_to_uc010wrq.1_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_OTOP3_5end | |||
|id=chr17:72931942..72931981,+ | |||
|ontology_enrichment_celltype=CL:0000575!6.49e-12!2;CL:0002553!3.36e-07!1;CL:0000167!6.38e-07!1;CL:0000164!6.38e-07!1;CL:0000502!6.38e-07!1;CL:0000172!6.38e-07!1;CL:0000173!6.38e-07!1;CL:0002351!6.38e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.41e-14;1!CL:0002535;5.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.41e-14,1;CL:0002535,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.72e-14;1!UBERON:0008814;8.32e-08;2!UBERON:0010056;8.32e-08;2 | |||
|ontology_enrichment_disease=DOID:4430!6.38e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;1.18e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.21e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000002!4.04e-09!6;UBERON:0001560!4.04e-09!6;UBERON:0001723!1.33e-08!3;UBERON:0001033!1.33e-08!3;UBERON:0010056!1.33e-08!3;UBERON:0000020!2.95e-08!23;UBERON:0001032!6.89e-08!24;UBERON:0004456!6.89e-08!24;UBERON:0001444!7.25e-08!48;UBERON:0002372!5.37e-07!1;UBERON:0001961!5.37e-07!1;UBERON:0001744!5.37e-07!1;UBERON:0001735!5.37e-07!1;UBERON:0004119!6.63e-07!169;UBERON:0000925!6.63e-07!169;UBERON:0006595!6.63e-07!169;UBERON:0001007!7.56e-07!155;UBERON:0001555!7.56e-07!155;UBERON:0007026!7.56e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.03e-25;4!UBERON:0001723;3.02e-18;3!UBERON:0001033;3.02e-18;3!UBERON:0000160;2.37e-12;17!UBERON:0000002;7.26e-10;6!UBERON:0001560;7.26e-10;6!UBERON:0005409;1.02e-09;22!UBERON:0004921;1.15e-08;33!UBERON:0006955;5.74e-08;2!UBERON:0004801;5.74e-08;2!UBERON:0000341;8.32e-08;2!UBERON:0001555;2.93e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.80e-25,4;UBERON:0001723,3.30e-18,3;UBERON:0001033,3.30e-18,3;UBERON:0010056,3.30e-18,3;UBERON:0000160,2.34e-12,17;UBERON:0000002,7.42e-10,6;UBERON:0001560,7.42e-10,6;UBERON:0005409,1.26e-08,25;UBERON:0004921,4.52e-08,118;UBERON:0006955,5.74e-08,2;UBERON:0004801,5.74e-08,2;UBERON:0000341,8.60e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.05411693991973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.34139086666642,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8684280296745,0,0,0,0,0,0,0,0,0,0,0,9.67925728389311,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0,3.10364852762942,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,9.32280309223087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,1.8689887846723,0,13.4283035107824,9.39806110167016,3.76253837089218,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.580536810308,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0,0,1.74173398317569,1.02669990325584,0.673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@OTOP3 | |||
}} |
Revision as of 17:15, 20 January 2014
Short description: | p1@OTOP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OTOP3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 128bp_to_uc010wrq.1_5end |
EntrezGene: | OTOP3 |
HGNC: | 19658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.41e-14 | 1 |
epithelial cell of cervix | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.80e-25 | 4 |
tongue | 3.30e-18 | 3 |
gustatory system | 3.30e-18 | 3 |
future tongue | 3.30e-18 | 3 |
intestine | 2.34e-12 | 17 |
uterine cervix | 7.42e-10 | 6 |
neck of organ | 7.42e-10 | 6 |
gastrointestinal system | 1.26e-08 | 25 |
subdivision of digestive tract | 4.52e-08 | 118 |
uterine epithelium | 5.74e-08 | 2 |
cervix epithelium | 5.74e-08 | 2 |
throat | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.21e-11 | 5 |