FFCP PHASE1:Hg19::chr18:21479368..21479399,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21479368..21479399,- | |||
|id=chr18:21479368..21479399,- | |||
|ontology_enrichment_celltype=CL:0002076!4.03e-26!43;CL:0000066!1.04e-18!254;CL:0000223!1.02e-17!59;CL:0002368!4.47e-13!13;CL:0002621!7.40e-12!3;CL:0002251!8.72e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0000240;3.24e-25;6!CL:0000311;3.24e-25;6!CL:0000079;3.24e-25;6!CL:0000237;3.24e-25;6!CL:0002327;9.12e-18;4!CL:0002336;1.22e-17;1!CL:0002261;1.22e-17;1!CL:0002170;1.22e-17;1!CL:0000312;3.60e-14;5!CL:0002159;2.49e-11;14!CL:0002076;1.35e-08;42!CL:0000362;2.75e-08;9!CL:0002166;5.97e-07;3!CL:0002231;7.28e-07;3!CL:0002621;7.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,4.16e-25,6;CL:0000311,4.16e-25,6;CL:0000079,4.16e-25,6;CL:0000237,4.16e-25,6;CL:0000036,4.16e-25,6;CL:0000357,4.16e-25,6;CL:0000114,4.16e-25,6;CL:0002327,7.39e-18,4;CL:0002336,1.44e-17,1;CL:0002261,1.44e-17,1;CL:0002170,1.44e-17,1;CL:0000312,4.11e-14,5;CL:0002159,2.72e-11,14;CL:0002076,7.77e-10,42;CL:0000066,1.64e-08,253;CL:0000362,2.96e-08,9;CL:0000223,4.03e-07,58;CL:0002166,6.14e-07,3;CL:0002231,6.88e-07,3;CL:0002621,7.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;3.24e-25;6!CL:0000114;3.24e-25;6 | |||
|ontology_enrichment_disease=DOID:1749!1.55e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.39e-15!14;UBERON:0000158!6.39e-15!14;UBERON:0003124!1.34e-12!7;UBERON:0001949!7.40e-12!3;UBERON:0004119!1.65e-10!169;UBERON:0000925!1.65e-10!169;UBERON:0006595!1.65e-10!169;UBERON:0001987!7.86e-09!4;UBERON:0004340!7.86e-09!4;UBERON:0000478!3.72e-08!24;UBERON:0003100!5.99e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;9.12e-18;4!UBERON:0001949;7.28e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.39e-18,4;UBERON:0005333,7.39e-18,4;UBERON:0008425,7.39e-18,4;UBERON:0005311,7.39e-18,4;UBERON:0000076,2.07e-09,8;UBERON:0001949,7.70e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30475599358114,0,1.40740561376283,1.38882667737794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19955320497149,0.992425680696705,4.74660170325096,2.90633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80709058424599,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32227932288782,1.53752053892085,0.255225424989168,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:21479368..21479399,- | |||
}} |
Revision as of 18:47, 20 January 2014
Short description: | p@chr18:21479368..21479399, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr18:21479368..21479399, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 4.16e-25 | 6 |
keratin accumulating cell | 4.16e-25 | 6 |
stratified epithelial cell | 4.16e-25 | 6 |
keratinizing barrier epithelial cell | 4.16e-25 | 6 |
epithelial fate stem cell | 4.16e-25 | 6 |
stratified epithelial stem cell | 4.16e-25 | 6 |
surface ectodermal cell | 4.16e-25 | 6 |
mammary gland epithelial cell | 7.39e-18 | 4 |
buccal mucosa cell | 1.44e-17 | 1 |
endothelial cell of viscerocranial mucosa | 1.44e-17 | 1 |
keratinized cell of the oral mucosa | 1.44e-17 | 1 |
keratinocyte | 4.11e-14 | 5 |
general ecto-epithelial cell | 2.72e-11 | 14 |
endo-epithelial cell | 7.77e-10 | 42 |
epithelial cell | 1.64e-08 | 253 |
epidermal cell | 2.96e-08 | 9 |
endodermal cell | 4.03e-07 | 58 |
epithelial cell of Malassez | 6.14e-07 | 3 |
epithelial cell of prostate | 6.88e-07 | 3 |
gingival epithelial cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.39e-18 | 4 |
mammary bud | 7.39e-18 | 4 |
mammary ridge | 7.39e-18 | 4 |
mammary placode | 7.39e-18 | 4 |
external ectoderm | 2.07e-09 | 8 |
gingival epithelium | 7.70e-07 | 3 |