FFCP PHASE1:Hg19::chr18:43405655..43405696,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27596 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZMC9 | |||
|association_with_transcript=110bp_to_ENST00000389474,NM_213602,uc002lbl.1_5end | |||
|coexpression_cluster_id=C3721 | |||
|description=CAGE_peak_1_at_SIGLEC15_5end | |||
|id=chr18:43405655..43405696,+ | |||
|ontology_enrichment_celltype=CL:0002371!7.38e-14!591;CL:0000048!3.61e-12!430;CL:0000723!9.26e-12!436;CL:0000144!6.55e-11!625;CL:0000034!8.32e-11!444;CL:0000548!1.09e-10!679;CL:0000004!1.09e-10!679;CL:0000255!1.09e-10!679;CL:1000449!1.13e-10!16;CL:0000012!2.26e-10!682;CL:0002009!6.32e-10!65;CL:0002194!7.12e-10!63;CL:0000576!7.12e-10!63;CL:0000040!7.12e-10!63;CL:0000559!7.12e-10!63;CL:0002320!1.88e-09!365;CL:1000507!5.00e-09!12;CL:1000494!5.00e-09!12;CL:1000497!6.11e-09!18;CL:0002518!6.11e-09!18;CL:0000055!8.77e-09!180;CL:0000557!3.61e-08!71;CL:0002681!7.75e-08!13;CL:0002584!7.75e-08!13;CL:0000839!7.87e-08!70;CL:0000134!1.63e-07!358;CL:0000057!4.10e-07!75;CL:0000219!5.77e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.33e-22;15!CL:1000507;8.23e-21;10!CL:1000494;8.23e-21;10!CL:1000497;4.85e-19;17!CL:0002518;4.85e-19;17!CL:0002681;2.15e-16;12!CL:0002584;2.15e-16;12!CL:0000235;3.59e-13;6!CL:0000306;7.02e-08;4!CL:0002222;7.02e-08;4!CL:0002224;7.02e-08;4!CL:1000746;1.45e-07;7!CL:1000612;1.45e-07;7!CL:0000239;5.50e-07;3!CL:1000615;5.50e-07;3!CL:0002306;5.50e-07;3!CL:0000346;5.84e-07;3!CL:1000428;5.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.91e-22,15;CL:1000507,9.81e-21,10;CL:1000494,9.81e-21,10;CL:1000497,5.40e-19,17;CL:0002518,5.40e-19,17;CL:0002681,2.37e-16,12;CL:0002584,2.37e-16,12;CL:0000235,3.58e-13,6;CL:0002194,2.51e-08,59;CL:0000576,2.51e-08,59;CL:0000040,2.51e-08,59;CL:0000559,2.51e-08,59;CL:0002009,6.78e-08,61;CL:0000306,7.88e-08,4;CL:0002222,7.88e-08,4;CL:0002224,7.88e-08,4;CL:1000746,1.45e-07,7;CL:1000612,1.45e-07,7;CL:0000346,5.30e-07,3;CL:1000428,5.30e-07,3;CL:0000839,6.16e-07,66;CL:0000239,6.22e-07,3;CL:1000615,6.22e-07,3;CL:0002306,6.22e-07,3;CL:0000557,9.17e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.96e-14!167;UBERON:0004211!1.13e-10!16;UBERON:0001285!1.13e-10!16;UBERON:0007684!1.13e-10!16;UBERON:0003220!1.13e-10!16;UBERON:0004208!1.13e-10!16;UBERON:0002371!6.10e-10!80;UBERON:0006555!9.42e-10!17;UBERON:0005103!9.42e-10!17;UBERON:0000083!9.42e-10!17;UBERON:0009201!9.42e-10!17;UBERON:0004819!9.42e-10!17;UBERON:0006553!9.42e-10!17;UBERON:0003074!9.42e-10!17;UBERON:0003060!9.42e-10!17;UBERON:0004765!9.45e-10!101;UBERON:0001434!9.45e-10!101;UBERON:0002384!2.32e-09!375;UBERON:0003887!4.30e-09!21;UBERON:0009773!5.00e-09!12;UBERON:0001231!5.00e-09!12;UBERON:0004810!5.00e-09!12;UBERON:0001474!5.33e-09!86;UBERON:0000080!6.11e-09!18;UBERON:0002120!6.11e-09!18;UBERON:0004875!6.11e-09!18;UBERON:0005721!6.11e-09!18;UBERON:0005754!6.11e-09!18;UBERON:0007297!6.11e-09!18;UBERON:0003081!1.04e-08!216;UBERON:0002405!4.15e-08!115;UBERON:0001225!7.75e-08!13;UBERON:0008987!7.75e-08!13;UBERON:0002193!1.26e-07!112;UBERON:0004876!1.41e-07!20;UBERON:0002390!6.93e-07!102;UBERON:0003061!6.93e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.33e-22;15!UBERON:0004819;4.33e-22;15!UBERON:0001285;4.33e-22;15!UBERON:0007684;4.33e-22;15!UBERON:0004211;8.23e-21;10!UBERON:0009773;8.23e-21;10!UBERON:0001231;8.23e-21;10!UBERON:0004810;8.23e-21;10!UBERON:0001225;2.15e-16;12!UBERON:0008987;2.15e-16;12!UBERON:0000353;5.53e-15;15!UBERON:0001851;1.33e-12;15!UBERON:0002113;2.08e-12;24!UBERON:0011143;2.08e-12;24!UBERON:0006554;8.76e-11;30!UBERON:0001008;8.76e-11;30!UBERON:0000489;1.15e-09;29!UBERON:0010077;7.02e-08;4!UBERON:0005389;7.02e-08;4!UBERON:0000484;7.02e-08;4!UBERON:0000965;7.02e-08;4!UBERON:0001803;7.02e-08;4!UBERON:0000074;1.45e-07;7!UBERON:0001229;1.45e-07;7!UBERON:0007625;1.56e-07;11!UBERON:0006853;5.50e-07;3!UBERON:0007685;5.50e-07;3!UBERON:0004134;5.50e-07;3!UBERON:0000412;5.84e-07;3!UBERON:0001992;5.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.91e-22,15;UBERON:0009773,4.91e-22,15;UBERON:0001231,4.91e-22,15;UBERON:0001285,4.91e-22,15;UBERON:0007684,4.91e-22,15;UBERON:0004208,4.91e-22,15;UBERON:0004810,9.81e-21,10;UBERON:0006555,2.03e-20,16;UBERON:0004819,2.03e-20,16;UBERON:0001225,2.37e-16,12;UBERON:0008987,2.37e-16,12;UBERON:0000353,6.24e-15,15;UBERON:0001851,1.44e-12,15;UBERON:0002113,3.75e-11,26;UBERON:0003918,3.75e-11,26;UBERON:0011143,3.75e-11,26;UBERON:0005095,3.75e-11,26;UBERON:0007687,3.75e-11,26;UBERON:0000489,8.46e-09,31;UBERON:0010077,7.88e-08,4;UBERON:0005389,7.88e-08,4;UBERON:0000484,7.88e-08,4;UBERON:0002546,7.88e-08,4;UBERON:0000965,7.88e-08,4;UBERON:0001803,7.88e-08,4;UBERON:0003073,7.88e-08,4;UBERON:0005426,7.88e-08,4;UBERON:0007625,1.31e-07,11;UBERON:0002371,1.35e-07,76;UBERON:0010532,1.45e-07,7;UBERON:0000074,1.45e-07,7;UBERON:0001229,1.45e-07,7;UBERON:0001230,1.45e-07,7;UBERON:0003220,1.45e-07,7;UBERON:0005749,1.45e-07,7;UBERON:0004199,1.45e-07,7;UBERON:0004209,1.45e-07,7;UBERON:0004198,1.45e-07,7;UBERON:0004765,5.04e-07,90;UBERON:0000412,5.30e-07,3;UBERON:0001992,5.30e-07,3;UBERON:0001434,5.44e-07,100;UBERON:0006853,6.22e-07,3;UBERON:0007685,6.22e-07,3;UBERON:0004134,6.22e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.10402800032079,0.331397375727916,2.6893005858071,1.20538905604795,0,0.487932798790507,4.80172126499473,12.4440421658994,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59788685599811,10.6884909786263,1.54545340580512,0.145398238779565,0.377875943688809,0,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0,0.47296445977717,0.689491361473237,2.5819387343353,0,0.376484679085209,0.272906150057846,0.449446968890169,0.918251677112708,1.28371610830437,0,0.329851300186716,0,0,1.16083695451434,6.24123747160254,4.9825779919646,0.251248665256743,0,0,0.605399502633369,2.20966581592539,2.53169909952708,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.850813354476611,2.4390233720882,1.93236528524877,0,0,0,8.76277962867645,7.66170844116776,3.58986493400936,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,1.06400514659507,0,1.06748995729705,0.24666754841716,0,0,0.163461903113459,0.454072282934794,0.576175924479999,0,0.312160076830321,0,0,0.23486899728753,0.323745888736263,0,0,5.65037859634133,0.309977343527296,0,0.247266929278557,0,0.718618141816238,1.0100166837244,2.00189631795143,0,0.438977620880838,0.919463387397059,0.600952235626387,0.226864366320042,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,1.0126579934476,0.194874010322397,0,0,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,14.7945415784364,19.3388889893473,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,4.63233087806019,0,0,0,0,0,0,5.77325368101093,1.507095264676,5.4007999348478,0.144366447761074,0,0.380508304469197,0,0,6.40164215827233,41.1847506645058,12.3363864699644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,4.37311228946907,0.43596006883328,7.84719658284165,0,0,1.690605505112,0,0,0.771622122786426,1.41849132023278,1.5985330740966,0,0,0,1.62868092146868,0,0,0,0,0,10.9461402577071,8.03611346291402,6.32501818449095,0,0,1.42636905040718,0.144781306667579,1.64381058040307,3.04403637507822,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.736148950314839,9.50323990013386,0.813795071099207,0,0,0,0,0,2.27407504055985,2.0694614258501,0,1.29058417979192,0,3.32861967686659,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0.511707249066704,0.160853921143607,0,4.62629081407967,1.9531789784444,2.13530605635904,5.19254429183621,3.95115286763861,0,0,0,0,0,0,23.9135794840928,19.4848802874169,9.41219723012226,17.5367069583913,13.5106084982881,2.27466768141793,0,18.7846847008861,4.62681758070868,24.9270722540345,6.02027728625824,4.58777291481069,4.15538004464362,8.2833659247206,0,0,0,0,0,0.206082023295445,0,0,2.29706215198469,0,0,1.64340221096607,0.770243085573222,0.767518373630648,2.48105830472155,0.537101224341368,0.290033387828457,2.89770533214743,0,0,0,0,0,0,0,0,0,1.06461206063404,0,0.9266210955196,0,0.372158369359667,2.21465597303108,0,0,0,0.636406495851874,0.78494864019923,0,0,0.235624804691373,0.606547444719948,0,0.421258456238981,0,0.487426979262569,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,3.21612760289743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,1.91505370132367,1.69338866179106,0,1.12318871245384,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0,0,0,0,0,36.2866378374673,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,2.22273980289274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0,0.0915975934018623,0,0,1.8837630767403,0.166211681900156,0,0,0,0,0,4.64195741961659,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0.347119476670262,0,0,0,0,0,0,0,0.0969890164884194,0,0,3.56309004081552,20.8650342288139,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0.869767748958028,0,0,0.313808538937,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0.74627401443437,0.233713309847224,0,0,0.50313580350515,0.889811221596536,0.457680136793847,0,0.466311601748341,1.62640664988597,0.63718706865481,1.79921244865442,0.621051827505038,0,1.32920857278997,1.5652351854352,0,0,0,0.545545977607678,0.644463342254931,0.464033759878494,0,2.00013882331577,1.03018711554838,0,7.57109389371906,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0.163565394255844,1.31043939538565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0.690359926060101,0,0,0.20170506870352,0,0,0.49131575253029,0,0,0,0,0,0,0,0,2.11045493231545,0,0,0,0,0,0,0,0.51446402831225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| |||
|short_description=p1@SIGLEC15 | |||
}} |
Revision as of 19:12, 20 January 2014
Short description: | p1@SIGLEC15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SIGLEC15_5end |
Coexpression cluster: | C3721_Macrophage_fibrous_anaplastic_Renal_serous_Monocytederived_small |
Association with transcript: | 110bp_to_ENST00000389474, NM_213602, uc002lbl.1_5end |
EntrezGene: | SIGLEC15 |
HGNC: | 27596 |
UniProt: | Q6ZMC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.91e-22 | 15 |
kidney tubule cell | 9.81e-21 | 10 |
nephron tubule epithelial cell | 9.81e-21 | 10 |
kidney cell | 5.40e-19 | 17 |
kidney epithelial cell | 5.40e-19 | 17 |
kidney cortical cell | 2.37e-16 | 12 |
renal cortical epithelial cell | 2.37e-16 | 12 |
macrophage | 3.58e-13 | 6 |
monopoietic cell | 2.51e-08 | 59 |
monocyte | 2.51e-08 | 59 |
monoblast | 2.51e-08 | 59 |
promonocyte | 2.51e-08 | 59 |
macrophage dendritic cell progenitor | 6.78e-08 | 61 |
crystallin accumulating cell | 7.88e-08 | 4 |
vertebrate lens cell | 7.88e-08 | 4 |
lens epithelial cell | 7.88e-08 | 4 |
glomerular cell | 1.45e-07 | 7 |
kidney corpuscule cell | 1.45e-07 | 7 |
hair follicle dermal papilla cell | 5.30e-07 | 3 |
stem cell of epidermis | 5.30e-07 | 3 |
myeloid lineage restricted progenitor cell | 6.16e-07 | 66 |
brush border epithelial cell | 6.22e-07 | 3 |
kidney cortex tubule cell | 6.22e-07 | 3 |
epithelial cell of proximal tubule | 6.22e-07 | 3 |
granulocyte monocyte progenitor cell | 9.17e-07 | 67 |