FFCP PHASE1:Hg19::chr19:6693489..6693505,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-394bp_to_ENST00000475508_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_C3_5end | |||
|id=chr19:6693489..6693505,- | |||
|ontology_enrichment_celltype=CL:0000181!7.16e-09!12;CL:0000417!7.16e-09!12;CL:0000668!7.16e-09!12;CL:0000414!7.16e-09!12;CL:0000412!7.16e-09!12;CL:0000182!7.16e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.63e-23;12!CL:0000511;6.46e-09;1!CL:0002625;6.46e-09;1!CL:0000216;6.46e-09;1!CL:0002595;2.87e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.48e-23,12;CL:0000511,3.58e-09,1;CL:0002625,3.58e-09,1;CL:0000216,3.58e-09,1;CL:0002595,2.88e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.26e-17;11!UBERON:0009497;6.80e-15;13!UBERON:0004874;6.46e-09;1!UBERON:0001041;7.56e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;6.46e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.03e-15!115;UBERON:0000477!1.86e-10!286;UBERON:0002107!2.48e-10!19;UBERON:0006925!2.48e-10!19;UBERON:0008836!2.48e-10!19;UBERON:0004111!1.26e-09!241;UBERON:0000481!1.71e-09!347;UBERON:0009497!2.13e-09!25;UBERON:0000015!2.13e-09!25;UBERON:0002423!2.13e-09!25;UBERON:0006235!2.13e-09!25;UBERON:0004161!2.13e-09!25;UBERON:0009854!4.04e-09!23;UBERON:0009856!9.81e-09!26;UBERON:0005057!1.94e-08!26;UBERON:0008835!2.18e-08!22;UBERON:0003894!2.18e-08!22;UBERON:0000025!2.86e-08!194;UBERON:0007499!4.87e-08!25;UBERON:0002365!6.41e-08!31;UBERON:0002330!6.41e-08!31;UBERON:0002368!6.42e-08!35;UBERON:0004921!1.29e-07!129;UBERON:0004185!1.29e-07!129;UBERON:0001007!1.49e-07!155;UBERON:0001555!1.49e-07!155;UBERON:0007026!1.49e-07!155;UBERON:0001041!1.72e-07!98;UBERON:0004119!3.09e-07!169;UBERON:0000925!3.09e-07!169;UBERON:0006595!3.09e-07!169;UBERON:0003929!3.88e-07!54;UBERON:0000077!6.16e-07!130;UBERON:0003914!7.16e-07!118;UBERON:0003104!9.88e-07!238;UBERON:0009142!9.88e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.53e-25;19!UBERON:0006925;1.53e-25;19!UBERON:0002423;3.69e-19;25!UBERON:0002365;4.97e-19;31!UBERON:0002330;4.97e-19;31!UBERON:0002368;2.80e-13;33!UBERON:0001282;3.05e-09;1!UBERON:0009842;3.05e-09;1!UBERON:0003704;3.05e-09;1!UBERON:0001171;3.05e-09;1!UBERON:0001172;3.05e-09;1!UBERON:0000989;6.46e-09;1!UBERON:0001136;6.46e-09;1!UBERON:0001343;6.46e-09;1!UBERON:0002171;6.46e-09;1!UBERON:0008811;6.46e-09;1!UBERON:0006518;6.46e-09;1!UBERON:0008949;6.46e-09;1!UBERON:0004910;6.46e-09;1!UBERON:0000101;6.46e-09;1!UBERON:0004813;6.46e-09;1!UBERON:0002167;6.46e-09;1!UBERON:0000949;6.07e-08;43!UBERON:0003834;2.87e-07;5!UBERON:0001533;2.87e-07;5!UBERON:0005172;6.06e-07;52!UBERON:0005173;6.06e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.42e-25,19;UBERON:0006925,2.42e-25,19;UBERON:0008836,2.42e-25,19;UBERON:0008835,9.55e-22,22;UBERON:0003894,9.55e-22,22;UBERON:0009854,9.35e-21,23;UBERON:0007499,5.19e-19,25;UBERON:0009497,5.19e-19,25;UBERON:0000015,5.19e-19,25;UBERON:0002423,5.19e-19,25;UBERON:0006235,5.19e-19,25;UBERON:0004161,5.19e-19,25;UBERON:0002365,5.40e-19,31;UBERON:0002330,5.40e-19,31;UBERON:0009856,3.07e-18,26;UBERON:0002368,2.84e-13,35;UBERON:0000949,4.42e-10,45;UBERON:0002530,2.45e-09,59;UBERON:0001282,3.31e-09,1;UBERON:0009842,3.31e-09,1;UBERON:0003704,3.31e-09,1;UBERON:0001171,3.31e-09,1;UBERON:0001172,3.31e-09,1;UBERON:0001136,3.58e-09,1;UBERON:0001343,3.58e-09,1;UBERON:0004910,3.58e-09,1;UBERON:0005154,3.58e-09,1;UBERON:0005295,3.58e-09,1;UBERON:0004813,3.58e-09,1;UBERON:0005297,3.58e-09,1;UBERON:0005294,3.58e-09,1;UBERON:0010141,3.58e-09,1;UBERON:0005891,3.58e-09,1;UBERON:0000989,4.19e-09,1;UBERON:0008811,4.19e-09,1;UBERON:0006258,4.19e-09,1;UBERON:0005876,4.19e-09,1;UBERON:0004874,4.19e-09,1;UBERON:0002171,5.31e-09,1;UBERON:0006518,5.31e-09,1;UBERON:0008949,5.31e-09,1;UBERON:0000101,5.31e-09,1;UBERON:0002167,5.31e-09,1;UBERON:0005256,1.84e-08,122;UBERON:0003929,3.23e-08,54;UBERON:0005172,3.23e-08,54;UBERON:0005173,3.23e-08,54;UBERON:0003914,1.80e-07,117;UBERON:0001041,2.60e-07,87;UBERON:0002417,2.75e-07,60;UBERON:0000916,2.75e-07,60;UBERON:0003834,2.88e-07,5;UBERON:0001533,2.88e-07,5 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,1.20538905604795,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,1.12135520028461,0,0,0.622422070799533,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,101.404027857465,35.3817798003945,7.08947888017685,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,3.57656445851882,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,1.50719688529793,0,0.599837947092342,0,0,2.10833939483032,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03850885836724,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0,0.330569830721956,0.192190067365106,0,0,0,0,0.6970372701606,0.924100740528266,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0.636406495851874,0,0,0,0,0,0,0,0,2.68084838594413,0,0,0,0,0,3.3171948762061,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,1.26664581178598,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0,0,0.0769502585037971,2.05095700524602,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.442287822516696,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.219267951258557,0.328461828212837,0.581934098930517,0,0,0,0.397429223405979,0.0633107959558787,0,0.320635281006135,0.426905989478705,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0.684526894459965,0,0,0,0.558564802544508,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0.787831823072237,0.906574442192831,1.01105315781277,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.394028536495991,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,8.06037285229453,3.97520666736664,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.0620964029413835,0.138348634936231,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0,0,0.521745061811734,1.05180326298053,0.380805212168795,0.406870733204662,0,0.644463342254931,0,0,0,0,0,0,0,0.428883182749851,0.521988583930423,0,0,0,0,1.23520578864389,0.438568099157414,0,0.38582807654183,0.337884881306145,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,1.48863353516788,0,0.511049710558381,0,0,0,0,0,0,1.02892805662451,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,1.03608082081518,0.17071847709395,0.691259661814092,0,0.118332000730565,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980593287015622,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0,0,0,0,0.430018749454354,0,0,0,0.5290268405154,1.11598505450025,0,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0.129177819672012,0,0,0.190941474834495,0,0.217716747896961,0,0.26940821205835,0.430333232356058,0.332660356546013,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p16@C3 | |||
}} |
Revision as of 20:55, 20 January 2014
Short description: | p16@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_16_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -394bp_to_ENST00000475508_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.48e-23 | 12 |
androgen binding protein secreting cell | 3.58e-09 | 1 |
seminiferous tubule epithelial cell | 3.58e-09 | 1 |
Sertoli cell | 3.58e-09 | 1 |
smooth muscle cell of the subclavian artery | 2.88e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.07e-08 | 1 |