FFCP PHASE1:Hg19::chr19:6710750..6710769,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=198bp_to_ENST00000466344_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_32_at_C3_5end | |||
|id=chr19:6710750..6710769,- | |||
|ontology_enrichment_celltype=CL:0000181!1.59e-09!12;CL:0000417!1.59e-09!12;CL:0000668!1.59e-09!12;CL:0000414!1.59e-09!12;CL:0000412!1.59e-09!12;CL:0000182!1.59e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.62e-13;12!CL:0002593;1.57e-09;2!CL:0000746;7.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.01e-13,12;CL:0002593,2.02e-09,2;CL:0000746,7.28e-07,3;CL:0000513,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.71e-07;11!CL:0000513;7.08e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.27e-11!115;UBERON:0002107!1.07e-10!19;UBERON:0006925!1.07e-10!19;UBERON:0008836!1.07e-10!19;UBERON:0008835!2.33e-10!22;UBERON:0003894!2.33e-10!22;UBERON:0002368!4.03e-10!35;UBERON:0009854!8.99e-10!23;UBERON:0007499!9.62e-09!25;UBERON:0009497!9.62e-09!25;UBERON:0000015!9.62e-09!25;UBERON:0002423!9.62e-09!25;UBERON:0006235!9.62e-09!25;UBERON:0004161!9.62e-09!25;UBERON:0002530!2.38e-08!59;UBERON:0009856!2.73e-08!26;UBERON:0000949!4.32e-08!45;UBERON:0004111!1.04e-07!241;UBERON:0003929!2.99e-07!54;UBERON:0005057!4.53e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.67e-22;19!UBERON:0006925;4.67e-22;19!UBERON:0002171;1.03e-17;1!UBERON:0006518;1.03e-17;1!UBERON:0008949;1.03e-17;1!UBERON:0000101;1.03e-17;1!UBERON:0002167;1.03e-17;1!UBERON:0002423;8.49e-17;25!UBERON:0002365;1.54e-13;31!UBERON:0002330;1.54e-13;31!UBERON:0002368;9.69e-12;33!UBERON:0002456;1.57e-09;2!UBERON:0000949;1.35e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.99e-22,19;UBERON:0006925,4.99e-22,19;UBERON:0008836,4.99e-22,19;UBERON:0008835,4.80e-19,22;UBERON:0003894,4.80e-19,22;UBERON:0009854,3.18e-18,23;UBERON:0002171,7.37e-18,1;UBERON:0006518,7.37e-18,1;UBERON:0008949,7.37e-18,1;UBERON:0000101,7.37e-18,1;UBERON:0002167,7.37e-18,1;UBERON:0007499,8.93e-17,25;UBERON:0009497,8.93e-17,25;UBERON:0000015,8.93e-17,25;UBERON:0002423,8.93e-17,25;UBERON:0006235,8.93e-17,25;UBERON:0004161,8.93e-17,25;UBERON:0009856,3.90e-16,26;UBERON:0002365,1.51e-13,31;UBERON:0002330,1.51e-13,31;UBERON:0002368,5.25e-12,35;UBERON:0002456,2.02e-09,2;UBERON:0000949,2.41e-09,45;UBERON:0003929,8.75e-08,54;UBERON:0005172,8.75e-08,54;UBERON:0005173,8.75e-08,54;UBERON:0005911,4.00e-07,82;UBERON:0002530,4.03e-07,59;UBERON:0002417,5.30e-07,60;UBERON:0000916,5.30e-07,60;UBERON:0009569,7.40e-07,112 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,4.91413608338813,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0.360299883542404,0,0.551482276150566,0.164831716762333,0.471824806979294,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,7.91382061861645,2.65013777824443,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.300515217994437,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0.657852148736121,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0.336283722218824,0.606965604236632,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0.47775168788705,0.142953088353313,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0,0,0.202056159043763,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0.201273793591026,0.320568492303233 | |||
|short_description=p32@C3 | |||
}} |
Revision as of 20:55, 20 January 2014
Short description: | p32@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 198bp_to_ENST00000466344_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.01e-13 | 12 |
smooth muscle cell of the internal thoracic artery | 2.02e-09 | 2 |
cardiac muscle cell | 7.28e-07 | 3 |
cardiac muscle myoblast | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 4.99e-22 | 19 |
digestive gland | 4.99e-22 | 19 |
liver bud | 4.99e-22 | 19 |
hepatic diverticulum | 4.80e-19 | 22 |
liver primordium | 4.80e-19 | 22 |
digestive tract diverticulum | 3.18e-18 | 23 |
lower lobe of right lung | 7.37e-18 | 1 |
right lung lobe | 7.37e-18 | 1 |
lower lobe of lung | 7.37e-18 | 1 |
lobe of lung | 7.37e-18 | 1 |
right lung | 7.37e-18 | 1 |
epithelial sac | 8.93e-17 | 25 |
epithelium of foregut-midgut junction | 8.93e-17 | 25 |
anatomical boundary | 8.93e-17 | 25 |
hepatobiliary system | 8.93e-17 | 25 |
foregut-midgut junction | 8.93e-17 | 25 |
septum transversum | 8.93e-17 | 25 |
sac | 3.90e-16 | 26 |
exocrine gland | 1.51e-13 | 31 |
exocrine system | 1.51e-13 | 31 |
endocrine gland | 5.25e-12 | 35 |
internal thoracic artery | 2.02e-09 | 2 |
endocrine system | 2.41e-09 | 45 |
gut epithelium | 8.75e-08 | 54 |
abdomen element | 8.75e-08 | 54 |
abdominal segment element | 8.75e-08 | 54 |
endo-epithelium | 4.00e-07 | 82 |
gland | 4.03e-07 | 59 |
abdominal segment of trunk | 5.30e-07 | 60 |
abdomen | 5.30e-07 | 60 |
subdivision of trunk | 7.40e-07 | 112 |