FFCP PHASE1:Hg19::chr19:6740888..6740937,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12304 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000490384_5end | |||
|description=CAGE_peak_2_at_TRIP10_5end | |||
|id=chr19:6740888..6740937,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.71e-17!180;CL:0000057!6.65e-10!75;CL:0000222!3.66e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000349;9.45e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.71e-10,76;CL:0000222,1.13e-09,121;CL:0000349,1.35e-07,19;CL:0000136,9.93e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!9.80e-16!659;UBERON:0000467!3.23e-09!625;UBERON:0000480!4.71e-09!626;UBERON:0000481!4.96e-08!347;UBERON:0002049!8.45e-08!79;UBERON:0007798!8.45e-08!79;UBERON:0000922!1.78e-07!612;UBERON:0000475!2.84e-07!365;UBERON:0002100!3.03e-07!216;UBERON:0005631!5.26e-07!14;UBERON:0000158!5.26e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,6.10e-08,160;UBERON:0009142,6.10e-08,160;UBERON:0002049,7.39e-08,78;UBERON:0007798,7.39e-08,78;UBERON:0005631,3.93e-07,14;UBERON:0000158,3.93e-07,14;UBERON:0002100,7.36e-07,199;UBERON:0004872,9.86e-07,83 | |||
|phase1_expression=11.9907730318567,7.92171938396638,10.4306259031019,11.0080628188443,18.7723659659461,13.9574163856059,2.53299878168311,3.15859936713415,6.7908263331958,4.66894479352867,5.58240934377942,10.7036272343784,8.44054330331051,7.67351388352289,7.95353701746998,2.01697543935533,4.82155622419182,1.46062018077475,3.90346239032406,7.1410213684537,7.75202626728161,6.89600387251793,5.15224776835902,5.47497700291537,5.14724822338691,0.534893840235659,0.246301768349837,0.629686250509434,0,0,0.464448369948228,1.83884244895785,2.409647350226,2.58827807116751,0.0774672005803016,0,0.880801318004542,0,0,0.217010870715852,3.13481663935894,1.94336199611388,2.83333124397605,0.436194716338694,1.13362783106643,0.727752183563449,1.16214518452842,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0.398927315243264,0,2.90209238628584,3.40431134814684,3.73693349397345,0.502497330513487,0,0.217188844705117,2.42159801053347,0.368277635987565,2.53169909952708,0,0,0,0.22465726229299,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0.526768169550154,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0,0.328875809207352,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,6.70700859703636,4.60305222636709,4.69870898099936,6.01605492763067,8.5459446186886,4.7717156823066,8.27279279514481,4.25406677238305,2.4390233720882,3.07421749925941,7.33482822787191,2.18577172975525,1.85392221392215,3.24547393654683,2.43781632218974,4.65352861816028,11.2090593423511,2.85997455390064,8.54352253057999,3.57772333260069,1.72046919021225,3.81854551768354,3.95715559346807,4.19499436209906,4.12677062910101,7.31482382878837,8.52775305258785,6.75955899104749,7.02913286805807,7.65375702507379,7.60272105718513,9.27435818683044,2.57364156242108,3.24056779152704,4.55428614248807,3.81699933464489,2.81528701208306,4.5994991239765,5.69559395740877,2.93122790288652,0,0,5.66922267785295,1.98788780678127,2.5326102332916,2.64818361626438,5.16305917347865,3.54668382198357,4.48542080113846,4.2699598291882,2.71334303258876,6.84664277879486,2.96363478553314,2.12500474047496,6.20565453344219,4.03323147135999,5.62371436401112,3.1216007683032,2.2818872861778,1.64393548606981,2.11382097558777,2.10434827678571,1.96631129383148,3.26646674007829,3.68502951935304,5.47626640231557,8.31602000097437,3.70900393917835,14.5625817910084,7.18618141816238,3.53505839303539,3.1279629967991,2.49357703935765,2.19488810440419,3.37136575378922,3.45547535485173,3.17610112848059,5.202299434977,6.62027905337559,7.2056846394251,6.00182192168805,7.11062451745228,5.41045134095821,5.58350568994769,3.88185564154912,7.60008640257349,8.58274832429989,10.1254888506529,9.5371173523099,3.19508633264953,3.72782763442269,6.78242369241951,1.93260853163297,2.18196896472668,0.860413786167011,3.90315859614705,4.37348235460901,4.18298194330266,3.42081481550722,5.80337957013945,4.74470566798579,3.12899064659632,5.78916844373597,6.90674606762403,13.4666699129274,5.77503585335668,4.37735160147422,5.05754070234305,1.92808823906786,3.639701100169,3.7039505495709,2.84724742933316,2.56179485504312,3.53198637225623,3.07797725557112,8.85786545549578,4.20725321410337,9.8777762719536,19.1111324801205,1.26755034821831,0,1.77236972004421,0,1.10689594688802,4.11762744716461,0.439001141634502,1.1240175325762,0.703702806881416,2.12953423864618,8.47101593806844,6.23960871167747,1.44331342025273,4.86907700895323,4.10930429825376,4.18662698507114,2.31492756288305,3.23432058798817,7.11183958163348,2.57545848628462,1.47730203652438,0.936017060556951,0.594524649154913,0.93733833986777,0.671928512795438,0.850650583454319,2.23896306757121,1.16253575405585,2.68367875415648,0.985326475791887,0.088048434013226,8.08579650609011,12.8266758541096,8.2057581727147,2.34942208881025,0.763976851116555,4.68869788840188,1.71072446022705,1.54241239054985,3.90445975197093,4.0015700568281,5.38229204857731,4.3596006883328,2.42016343209135,3.49033632546,25.0359512096318,3.381211010224,3.45719551560332,3.12022310734098,5.65856223376713,5.67396528093113,6.12771011737029,9.15059159412144,22.7901074264406,9.87888404136923,0.977208552881205,9.95097456479128,2.37585561880029,1.80863626235752,3.48613383440118,2.39935178836937,0,3.01354254859276,4.21667878966063,3.11512312139057,6.89171615004683,2.85273810081437,2.02693829334611,3.6985738059069,2.50685348535854,0,0,0,0,3.04913549066956,2.60279707715243,1.54657762555539,2.51274398001523,1.27587750330633,0,0,0,8.58840442033979,10.0034104211935,7.32415563989286,6.03115498439341,6.0665856191035,7.7274183366628,5.27136367467209,10.8340595901979,13.6444502433591,12.4167685551006,2.65690239414175,3.31864503375066,4.25729710893606,15.2724902820938,7.54915532383883,0.206768026122887,0.215714200818617,0.320182673410333,11.5188477149579,9.98612637062982,20.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| |||
|short_description=p2@TRIP10 | |||
}} |
Revision as of 20:57, 20 January 2014
Short description: | p2@TRIP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIP10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490384_5end |
EntrezGene: | TRIP10 |
HGNC: | 12304 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.71e-10 | 76 |
mesodermal cell | 1.13e-09 | 121 |
extraembryonic cell | 1.35e-07 | 19 |
fat cell | 9.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 6.10e-08 | 160 |
entire embryonic mesenchyme | 6.10e-08 | 160 |
vasculature | 7.39e-08 | 78 |
vascular system | 7.39e-08 | 78 |
extraembryonic membrane | 3.93e-07 | 14 |
membranous layer | 3.93e-07 | 14 |
trunk | 7.36e-07 | 199 |
splanchnic layer of lateral plate mesoderm | 9.86e-07 | 83 |