FFCP PHASE1:Hg19::chr19:14673071..14673095,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9524 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4551 | |||
|TSSclassifier=not | |||
|UniProt=Q9NZ01 | |||
|association_with_transcript=-237bp_to_BC000174_5end | |||
|coexpression_cluster_id=C2477 | |||
|description=CAGE_peak_6_at_TECR_5end | |||
|id=chr19:14673071..14673095,+ | |||
|ontology_enrichment_celltype=CL:0002556!2.86e-07!6;CL:0002552!8.70e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002540;1.96e-14;6!CL:0000515;8.90e-11;3!CL:0000062;5.29e-10;9!CL:0002092;1.51e-08;10!CL:0000056;3.40e-08;4!CL:0002552;8.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,2.41e-14,6;CL:0002092,1.71e-08,10;CL:0000515,2.31e-08,4;CL:0000062,4.27e-08,11;CL:0000375,4.27e-08,11;CL:0000335,4.27e-08,11;CL:0002552,8.33e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000515;3.40e-08;4!CL:0000335;4.03e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.07e-18!115;UBERON:0000165!7.22e-18!28;UBERON:0000930!7.22e-18!28;UBERON:0000078!3.52e-14!18;UBERON:0000166!2.50e-13!21;UBERON:0001444!4.63e-10!48;UBERON:0000075!4.03e-09!13;UBERON:0005944!4.03e-09!13;UBERON:0004288!4.03e-09!13;UBERON:0003089!4.03e-09!13;UBERON:0000153!5.63e-09!129;UBERON:0007811!5.63e-09!129;UBERON:0000033!1.27e-08!123;UBERON:0001044!1.61e-08!6;UBERON:0003293!1.61e-08!6;UBERON:0003294!1.61e-08!6;UBERON:0010047!1.61e-08!6;UBERON:0000167!1.61e-08!6;UBERON:0001004!3.31e-08!72;UBERON:0000161!1.18e-07!35;UBERON:0003129!1.24e-07!11;UBERON:0001758!2.86e-07!6;UBERON:0003672!2.86e-07!6;UBERON:0001828!3.45e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.97e-19;28!UBERON:0001474;1.38e-14;18!UBERON:0001434;2.63e-12;36!UBERON:0004765;8.59e-12;26!UBERON:0000161;4.90e-11;19!UBERON:0000166;4.90e-11;19!UBERON:0001134;1.87e-10;16!UBERON:0002036;1.87e-10;16!UBERON:0001044;2.86e-10;6!UBERON:0003293;2.86e-10;6!UBERON:0003294;2.86e-10;6!UBERON:0010047;2.86e-10;6!UBERON:0003408;2.86e-10;6!UBERON:0000167;2.86e-10;6!UBERON:0002371;6.98e-10;12!UBERON:0005090;6.66e-09;2!UBERON:0001630;6.66e-09;2!UBERON:0001829;8.52e-09;2!UBERON:0000341;3.11e-08;2!UBERON:0002204;4.03e-08;70!UBERON:0007811;8.37e-08;52!UBERON:0003127;9.72e-08;2!UBERON:0000153;2.95e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000165,3.52e-18,29;UBERON:0000930,3.52e-18,29;UBERON:0000166,5.83e-15,22;UBERON:0001044,2.15e-10,6;UBERON:0003293,2.15e-10,6;UBERON:0003294,2.15e-10,6;UBERON:0010047,2.15e-10,6;UBERON:0000167,2.15e-10,6;UBERON:0000153,1.42e-09,62;UBERON:0007811,1.42e-09,62;UBERON:0001444,1.45e-09,49;UBERON:0005090,6.56e-09,2;UBERON:0001630,6.56e-09,2;UBERON:0001829,8.55e-09,2;UBERON:0000161,2.36e-08,36;UBERON:0000341,3.87e-08,2;UBERON:0007023,4.43e-08,114;UBERON:0003127,4.80e-08,2;UBERON:0000033,5.06e-08,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0,0,0,0,1.44575660953827,0.50133791063589,1.44846518960824,2.3858578411533,0.486634870302636,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,1.63323337003915,0.368502951935304,2.58314452939414,1.18800285728205,0.494533858557114,0,0,0.336672227908132,0.125118519871964,1.10825646193673,0.877955241761676,1.5324389789951,1.20190447125277,0,0.358779271377724,0.213557388818567,0,0,0,0.515281080091258,0.37223371266318,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0.928735856063958,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02882949704857,0,1.3321108950805,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,1.59259437334337,1.84928690295345,1.43248770591916,0,0.394061520403854,0.862510299438069,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,1.62759014219841,0,0.178428988797162,0,0.819989904948992,1.80567659836631,0,1.03473071292505,0,0.921845842708516,0,0,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.20493126864202,3.71292749642646,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0,0.712256285173899,0.330569830721956,0.768760269460425,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,7.2231988256891,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.581934098930517,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.525774708558629,1.39641200636127,2.52076466412852,0.717873024576814,0.599037001496973,1.71690419254628,3.79391477651183,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,12.1498205483472,4.63464379255802,0,0,0,0,0,0,0,0,0,0,2.45637617086946,0,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0,0,3.26410682021684,2.0055191521816,5.82056595850577,1.31149052283922,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,1.24192805882767,0,0.124980407962107,0,0,0,0,0,0,0,0,2.84104507912634,2.0125432140206,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,16.3111302135345,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.443910671357348,0,9.3203820365721,5.95453414067153,0,0,0,0,0,0,0,0,0,1.42736439251347,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,1.86494547746733,0.3414369541879,0.691259661814092,8.17431981758527,0,0,0,0,0,0,0,0,0,10.3588613950063,16.631374710712,13.9177731760584,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.785233868459781,0,0,0.169927114687817,0,0,0,0,0,0,0,4.12856355064087,0.143339583151451,0,0.339957450954573,0,0,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,5.97055149322747,1.1903221573187,0,0,0,0.12729431655633,0,9.14410341167238,7.1868993227909,3.43495470374396,1.64961072403156,1.99596213927608,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@TECR | |||
}} |
Revision as of 21:49, 20 January 2014
Short description: | p6@TECR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TECR_5end |
Coexpression cluster: | C2477_osteosarcoma_skeletal_diaphragm_tongue_mature_penis_throat |
Association with transcript: | -237bp_to_BC000174_5end |
EntrezGene: | TECR |
HGNC: | 4551 |
UniProt: | Q9NZ01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 2.41e-14 | 6 |
bone marrow cell | 1.71e-08 | 10 |
skeletal muscle myoblast | 2.31e-08 | 4 |
osteoblast | 4.27e-08 | 11 |
osteoprogenitor cell | 4.27e-08 | 11 |
mesenchyme condensation cell | 4.27e-08 | 11 |
fibroblast of gingiva | 8.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mouth | 3.52e-18 | 29 |
stomodeum | 3.52e-18 | 29 |
oral opening | 5.83e-15 | 22 |
saliva-secreting gland | 2.15e-10 | 6 |
gland of oral region | 2.15e-10 | 6 |
gland of foregut | 2.15e-10 | 6 |
oral gland | 2.15e-10 | 6 |
oral cavity | 2.15e-10 | 6 |
anterior region of body | 1.42e-09 | 62 |
craniocervical region | 1.42e-09 | 62 |
subdivision of head | 1.45e-09 | 49 |
muscle structure | 6.56e-09 | 2 |
muscle organ | 6.56e-09 | 2 |
major salivary gland | 8.55e-09 | 2 |
orifice | 2.36e-08 | 36 |
throat | 3.87e-08 | 2 |
adult organism | 4.43e-08 | 114 |
open tracheal system trachea | 4.80e-08 | 2 |
head | 5.06e-08 | 56 |