FFCP PHASE1:Hg19::chr2:47452905..47452914,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000444361_5end | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_1_at_ENST00000444361_5end | |||
|id=chr2:47452905..47452914,+ | |||
|ontology_enrichment_celltype=CL:0000188!6.01e-09!9;CL:0002622!2.08e-07!3;CL:0000680!7.12e-07!57;CL:0000056!7.12e-07!57;CL:0000355!7.12e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.72e-10;2!CL:0002549;2.72e-10;2!CL:1000398;2.72e-10;2!CL:0002575;2.72e-10;2!CL:0002598;2.72e-10;2!CL:0000346;1.93e-07;3!CL:1000428;1.93e-07;3!CL:0002590;2.12e-07;3!CL:0000515;2.79e-07;3!CL:0000182;6.54e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.07e-10,2;CL:0002262,2.27e-10,2;CL:1000398,2.27e-10,2;CL:0002598,2.72e-10,2;CL:0002549,3.27e-10,2;CL:0000346,1.93e-07,3;CL:1000428,1.93e-07,3;CL:0002590,2.05e-07,3;CL:0000182,6.35e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.84e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;1.42e-19;1!DOID:3603;1.42e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.56e-19,1;DOID:3603,1.56e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!3.24e-14!143;UBERON:0000490!7.11e-14!138;UBERON:0003929!3.80e-11!54;UBERON:0009497!6.73e-10!25;UBERON:0000015!6.73e-10!25;UBERON:0002423!6.73e-10!25;UBERON:0006235!6.73e-10!25;UBERON:0004161!6.73e-10!25;UBERON:0007499!9.66e-10!25;UBERON:0008835!1.94e-09!22;UBERON:0003894!1.94e-09!22;UBERON:0003104!2.06e-09!238;UBERON:0009142!2.06e-09!238;UBERON:0005911!2.18e-09!82;UBERON:0002100!2.60e-09!216;UBERON:0009856!2.86e-09!26;UBERON:0009854!6.20e-09!23;UBERON:0000483!1.15e-07!309;UBERON:0004290!1.26e-07!70;UBERON:0000481!1.71e-07!347;UBERON:0000119!1.77e-07!312;UBERON:0000475!1.88e-07!365;UBERON:0002107!2.53e-07!19;UBERON:0006925!2.53e-07!19;UBERON:0008836!2.53e-07!19;UBERON:0001134!3.27e-07!61;UBERON:0002036!3.27e-07!61;UBERON:0003082!3.27e-07!61;UBERON:0002385!7.37e-07!63;UBERON:0001015!7.37e-07!63;UBERON:0000383!7.37e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;1.95e-15;5!UBERON:0001281;2.72e-10;2!UBERON:0003497;2.72e-10;2!UBERON:0003909;2.72e-10;2!UBERON:0005629;2.72e-10;2!UBERON:0003835;2.72e-10;2!UBERON:0005358;2.72e-10;2!UBERON:0001886;2.72e-10;2!UBERON:0004086;2.72e-10;2!UBERON:0005282;2.72e-10;2!UBERON:0005281;2.72e-10;2!UBERON:0002107;4.05e-09;19!UBERON:0006925;4.05e-09;19!UBERON:0006876;1.59e-07;11!UBERON:0000412;1.93e-07;3!UBERON:0001992;1.93e-07;3!UBERON:0001280;2.79e-07;3!UBERON:0004647;2.79e-07;3!UBERON:0002423;4.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,2.17e-15,5;UBERON:0001281,2.27e-10,2;UBERON:0003497,2.27e-10,2;UBERON:0003909,2.27e-10,2;UBERON:0003835,2.27e-10,2;UBERON:0005629,3.27e-10,2;UBERON:0005358,3.27e-10,2;UBERON:0001886,3.27e-10,2;UBERON:0004086,3.27e-10,2;UBERON:0005282,3.27e-10,2;UBERON:0005281,3.27e-10,2;UBERON:0002107,3.83e-09,19;UBERON:0006925,3.83e-09,19;UBERON:0008836,3.83e-09,19;UBERON:0008835,5.66e-08,22;UBERON:0003894,5.66e-08,22;UBERON:0009854,1.19e-07,23;UBERON:0006876,1.67e-07,11;UBERON:0000412,1.93e-07,3;UBERON:0001992,1.93e-07,3;UBERON:0001280,2.47e-07,3;UBERON:0004647,2.47e-07,3;UBERON:0005171,2.47e-07,3;UBERON:0007499,4.41e-07,25;UBERON:0009497,4.41e-07,25;UBERON:0000015,4.41e-07,25;UBERON:0002423,4.41e-07,25;UBERON:0006235,4.41e-07,25;UBERON:0004161,4.41e-07,25;UBERON:0005256,6.85e-07,122;UBERON:0009856,7.88e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,1.05950199351452,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,1.71571711905428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.676695028044854,0.308097234229289,0.307007349452259,0.413509717453592,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,2.60510858551767,0,0.38126038784765,0.511795582622668,1.28381696410176,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.409074730008619,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0.492137407573744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.511164065356265,0,0.439656701034247,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0.545545977607678,0,0,0,13.6009439985472,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,2.11312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685952037749674,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0.476128862927481,0,0,0.112131862580613,0,0,0,0.342233301085281,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000444361 | |||
}} |
Revision as of 03:00, 21 January 2014
Short description: | p1@ENST00000444361 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000444361_5end |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | -18bp_to_ENST00000444361_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.07e-10 | 2 |
endothelial cell of sinusoid | 2.27e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.27e-10 | 2 |
bronchial smooth muscle cell | 2.72e-10 | 2 |
fibroblast of choroid plexus | 3.27e-10 | 2 |
hair follicle dermal papilla cell | 1.93e-07 | 3 |
stem cell of epidermis | 1.93e-07 | 3 |
smooth muscle cell of the brain vasculature | 2.05e-07 | 3 |
hepatocyte | 6.35e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 2.17e-15 | 5 |
hepatic sinusoid | 2.27e-10 | 2 |
abdomen blood vessel | 2.27e-10 | 2 |
sinusoid | 2.27e-10 | 2 |
abdominal segment blood vessel | 2.27e-10 | 2 |
vascular plexus | 3.27e-10 | 2 |
ventricle of nervous system | 3.27e-10 | 2 |
choroid plexus | 3.27e-10 | 2 |
brain ventricle | 3.27e-10 | 2 |
ventricular system of brain | 3.27e-10 | 2 |
ventricular system of central nervous system | 3.27e-10 | 2 |
liver | 3.83e-09 | 19 |
digestive gland | 3.83e-09 | 19 |
liver bud | 3.83e-09 | 19 |
hepatic diverticulum | 5.66e-08 | 22 |
liver primordium | 5.66e-08 | 22 |
digestive tract diverticulum | 1.19e-07 | 23 |
vasculature of organ | 1.67e-07 | 11 |
dermal papilla | 1.93e-07 | 3 |
papillary layer of dermis | 1.93e-07 | 3 |
liver parenchyma | 2.47e-07 | 3 |
liver lobule | 2.47e-07 | 3 |
hepatic duct | 2.47e-07 | 3 |
epithelial sac | 4.41e-07 | 25 |
epithelium of foregut-midgut junction | 4.41e-07 | 25 |
anatomical boundary | 4.41e-07 | 25 |
hepatobiliary system | 4.41e-07 | 25 |
foregut-midgut junction | 4.41e-07 | 25 |
septum transversum | 4.41e-07 | 25 |
trunk mesenchyme | 6.85e-07 | 122 |
sac | 7.88e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.56e-19 | 1 |
mucinous cystadenocarcinoma | 1.56e-19 | 1 |