FFCP PHASE1:Hg19::chr2:113999263..113999274,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8622 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000468980_5end | |||
|description=CAGE_peak_13_at_PAX8_5end | |||
|id=chr2:113999263..113999274,- | |||
|ontology_enrichment_celltype=CL:0002621!2.07e-10!3;CL:0002149!1.03e-08!6;CL:0002255!1.03e-08!6;CL:0000066!8.15e-08!254;CL:0000128!3.26e-07!7;CL:0000126!3.26e-07!7;CL:0000127!3.26e-07!7;CL:0002453!3.26e-07!7;CL:0000223!4.49e-07!59;CL:0002602!4.88e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1001319;3.25e-19;1!CL:1000600;3.25e-19;1!CL:0000054;1.72e-10;2!CL:0000137;1.72e-10;2!CL:0000092;1.72e-10;2!CL:0002535;1.72e-10;2!CL:0000307;2.05e-07;3!CL:0002621;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.88e-19,1;CL:1000600,1.88e-19,1;CL:0002535,1.57e-10,2;CL:0000054,1.72e-10,2;CL:0000137,1.72e-10,2;CL:0000092,1.72e-10,2;CL:0000068,2.19e-07,3;CL:0000069,2.19e-07,3;CL:0000307,2.19e-07,3;CL:0000377,2.19e-07,3;CL:0002621,2.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.05e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!1.39e-09!143;DOID:3001!1.03e-08!6;DOID:305!1.90e-08!106;DOID:120!1.22e-07!27;DOID:162!3.94e-07!235;DOID:193!5.35e-07!29;DOID:14566!8.05e-07!239;DOID:4468!9.17e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.30e-19;1!DOID:3165;1.30e-19;1!DOID:0060121;1.30e-19;1!DOID:2438;1.30e-19;1!DOID:4418;1.30e-19;1!DOID:200;1.72e-10;2!DOID:4305;1.72e-10;2!DOID:4074;2.72e-10;2!DOID:4905;2.72e-10;2!DOID:4929;2.72e-10;2!DOID:3498;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.30e-19,1;DOID:3165,1.30e-19,1;DOID:0060121,1.30e-19,1;DOID:2438,1.30e-19,1;DOID:4418,1.30e-19,1;DOID:200,1.72e-10,2;DOID:4305,1.72e-10,2;DOID:4074,2.72e-10,2;DOID:4905,2.72e-10,2;DOID:3498,2.72e-10,2;DOID:4929,3.58e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.07e-10!3;UBERON:0002046!2.35e-10!5;UBERON:0004117!2.35e-10!5;UBERON:0007689!2.35e-10!5;UBERON:0007123!2.35e-10!5;UBERON:0003091!2.35e-10!5;UBERON:0002394!1.13e-07!4;UBERON:0003928!1.13e-07!4;UBERON:0002294!4.31e-07!7;UBERON:0001173!4.31e-07!7;UBERON:0004912!4.31e-07!7;UBERON:0009568!4.88e-07!2;UBERON:0002216!4.88e-07!2;UBERON:0002209!4.88e-07!2;UBERON:0002213!4.88e-07!2;UBERON:0004267!4.88e-07!2;UBERON:0006444!4.88e-07!2;UBERON:0001995!4.88e-07!2;UBERON:0004715!4.88e-07!2;UBERON:0001468!4.88e-07!2;UBERON:0001130!4.88e-07!2;UBERON:0001066!4.88e-07!2;UBERON:0000488!8.80e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.25e-19;1!UBERON:0004913;3.25e-19;1!UBERON:0003703;3.25e-19;1!UBERON:0001256;3.25e-19;1!UBERON:0001259;3.25e-19;1!UBERON:0001174;3.25e-19;1!UBERON:0004914;3.25e-19;1!UBERON:0002394;7.41e-19;4!UBERON:0003928;7.41e-19;4!UBERON:0002294;3.30e-11;7!UBERON:0001173;3.30e-11;7!UBERON:0006955;1.72e-10;2!UBERON:0004801;1.72e-10;2!UBERON:0001255;2.72e-10;2!UBERON:0001556;2.72e-10;2!UBERON:0003350;6.34e-10;8!UBERON:0000058;4.04e-08;10!UBERON:0001949;2.79e-07;3!UBERON:0002114;2.79e-07;2!UBERON:0000486;6.54e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.88e-19,1;UBERON:0001256,1.88e-19,1;UBERON:0001259,1.88e-19,1;UBERON:0004913,5.62e-19,1;UBERON:0003703,5.62e-19,1;UBERON:0001174,5.62e-19,1;UBERON:0004914,5.62e-19,1;UBERON:0002394,8.78e-13,6;UBERON:0003928,8.78e-13,6;UBERON:0006955,1.57e-10,2;UBERON:0004801,1.57e-10,2;UBERON:0001255,2.07e-10,2;UBERON:0001556,2.07e-10,2;UBERON:0003350,5.06e-10,8;UBERON:0002294,7.75e-09,9;UBERON:0001173,7.75e-09,9;UBERON:0004912,7.75e-09,9;UBERON:0001949,2.47e-07,3;UBERON:0002114,3.35e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0.123121058076788,0.612002073732759,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,0.272746120590835,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.613612095012929,0,0,1.16828856491525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0.173559738335131,0,2.61177619741208,0,0,0,0,0,0,0,0,0.274083849293502,2.18586072873289,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0.38582807654183,0.168942440653073,1.28120759293973,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0,0.20170506870352,0,0,0,1.03499260351932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2347384605883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0.33639558774184,0.25458863311266,1.21270313374932,0,0,0,0,0,1.79087190944144,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@PAX8 | |||
}} |
Revision as of 05:05, 21 January 2014
Short description: | p13@PAX8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PAX8_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000468980_5end |
EntrezGene: | PAX8 |
HGNC: | 8622 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.88e-19 | 1 |
lower urinary tract cell | 1.88e-19 | 1 |
epithelial cell of cervix | 1.57e-10 | 2 |
bone matrix secreting cell | 1.72e-10 | 2 |
osteocyte | 1.72e-10 | 2 |
osteoclast | 1.72e-10 | 2 |
duct epithelial cell | 2.19e-07 | 3 |
branched duct epithelial cell | 2.19e-07 | 3 |
tracheal epithelial cell | 2.19e-07 | 3 |
tracheoblast | 2.19e-07 | 3 |
gingival epithelial cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.88e-19 | 1 |
wall of urinary bladder | 1.88e-19 | 1 |
mucosa of urinary bladder | 1.88e-19 | 1 |
hepatopancreatic ampulla | 5.62e-19 | 1 |
extrahepatic bile duct | 5.62e-19 | 1 |
common bile duct | 5.62e-19 | 1 |
duodenal papilla | 5.62e-19 | 1 |
bile duct | 8.78e-13 | 6 |
digestive system duct | 8.78e-13 | 6 |
uterine epithelium | 1.57e-10 | 2 |
cervix epithelium | 1.57e-10 | 2 |
urinary bladder | 2.07e-10 | 2 |
lower urinary tract | 2.07e-10 | 2 |
epithelium of mucosa | 5.06e-10 | 8 |
biliary system | 7.75e-09 | 9 |
biliary tree | 7.75e-09 | 9 |
biliary bud | 7.75e-09 | 9 |
gingival epithelium | 2.47e-07 | 3 |
duodenum | 3.35e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.30e-19 | 1 |
skin benign neoplasm | 1.30e-19 | 1 |
integumentary system benign neoplasm | 1.30e-19 | 1 |
dermis tumor | 1.30e-19 | 1 |
cutaneous fibrous histiocytoma | 1.30e-19 | 1 |
giant cell tumor | 1.72e-10 | 2 |
bone giant cell tumor | 1.72e-10 | 2 |
pancreas adenocarcinoma | 2.72e-10 | 2 |
pancreatic carcinoma | 2.72e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.72e-10 | 2 |
tubular adenocarcinoma | 3.58e-10 | 2 |