FFCP PHASE1:Hg19::chr2:219866695..219866701,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:219866695..219866701,- | |||
|id=chr2:219866695..219866701,- | |||
|ontology_enrichment_celltype=CL:0000039!1.13e-09!7;CL:0000586!1.13e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.41e-12;2!CL:0000242;2.41e-12;2!CL:0002553;4.33e-07;1!CL:0000167;5.43e-07;1!CL:0000164;5.43e-07;1!CL:0000502;5.43e-07;1!CL:0000172;5.43e-07;1!CL:0000173;5.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.42e-12,2;CL:0002553,4.33e-07,1;CL:0000167,5.43e-07,1;CL:0000164,5.43e-07,1;CL:0000502,5.43e-07,1;CL:0000172,5.43e-07,1;CL:0000173,5.43e-07,1;CL:0002351,5.43e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;5.43e-07;1 | |||
|ontology_enrichment_disease=DOID:305!4.14e-18!106;DOID:0050687!4.88e-15!143;DOID:3119!4.53e-13!14;DOID:5093!4.93e-09!4;DOID:1612!4.93e-09!4;DOID:299!1.79e-07!25;DOID:162!2.58e-07!235;DOID:14566!6.18e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.11e-12;4!DOID:1612;3.11e-12;4!DOID:3119;1.43e-09;14!DOID:4430;5.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.77e-12,4;DOID:1612,2.77e-12,4;DOID:305,4.81e-11,106;DOID:3119,1.34e-09,14;DOID:0050687,2.37e-08,143;DOID:4430,5.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!2.12e-17!129;UBERON:0004185!2.12e-17!129;UBERON:0005409!1.48e-15!35;UBERON:0001007!3.25e-14!155;UBERON:0001555!3.25e-14!155;UBERON:0007026!3.25e-14!155;UBERON:0004119!1.23e-13!169;UBERON:0000925!1.23e-13!169;UBERON:0006595!1.23e-13!169;UBERON:0000077!4.04e-13!130;UBERON:0000160!6.81e-13!27;UBERON:0003296!1.35e-09!4;UBERON:0010133!1.35e-09!4;UBERON:0001041!3.90e-09!98;UBERON:0000059!2.13e-08!11;UBERON:0000002!6.46e-08!6;UBERON:0001560!6.46e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.11e-21;4!UBERON:0010133;1.11e-21;4!UBERON:0005409;3.06e-13;22!UBERON:0001894;1.84e-12;7!UBERON:0004921;4.18e-12;33!UBERON:0000007;4.31e-12;2!UBERON:0001905;2.35e-11;2!UBERON:0002757;2.35e-11;2!UBERON:0010134;2.35e-11;2!UBERON:0005408;2.35e-11;2!UBERON:0001899;2.35e-11;2!UBERON:0000160;7.00e-10;17!UBERON:0002108;7.24e-10;4!UBERON:0002114;6.72e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,9.19e-22,4;UBERON:0010133,9.19e-22,4;UBERON:0001894,1.66e-12,7;UBERON:0006222,1.66e-12,7;UBERON:0000007,4.19e-12,2;UBERON:0005409,1.53e-11,25;UBERON:0001905,2.01e-11,2;UBERON:0002757,2.01e-11,2;UBERON:0010134,2.01e-11,2;UBERON:0005408,2.01e-11,2;UBERON:0001899,2.01e-11,2;UBERON:0002108,6.92e-10,4;UBERON:0000160,7.48e-10,17;UBERON:0002114,5.84e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1608175918371,1.71697232418975,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.19924798825107,1.10513566212459,15.6198303669651,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,2.27395999990109,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.434589487688032,1.5950057986596,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,6.96683351754953,0.796118080530053,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,7.25944296291983,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0.0730893170861856,0,1.84279131327997,0,0,0,0,0,0,0.0801588202515337,1.28071796843612,0.19980960958213,3.02589876023623,0,28.3131746472242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,12.8145544480199,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0.197611631897944,0,0,0,0,0,0,0.628216385000937,0,0,0,0.573409195690071,0,0,0,0,0,0,0,23.4167452903441,30.4334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.6268251694171,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0.346576998451015,0,0,0,0,0,21.1008783032935,0.261906694481422,0,1.77427303460454,0,0,0,0,0,0,0,0,0,4.82131652290458,1.68141861109412,16.3880713143891,15.7086912032395,0,0,0,0,0,0,0.222462803784138,0.235479278551542,0,0.560544326627578,4.56579360254748,0,0,0,0,0,0,0,0,0,0,3.44181887056222,0,0,0,0,0,0,0,0.294450700845729,0.609589624911347,0,0,0,0,12.8666704904158,58.6904786726036,0,0.33883824611688,0.769583617218004,8.30295639616704,1.389134845943,0.437119121007915,22.1049129289916,0,27.8098325579919,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,6.34832208618481,0,0,0,0,0,34.0818967720765,0.509944148709909,0.534434810531121,5.42179907255585,0,0,0,0,0,0.852935927603924,0,0,0.124149428591716,0,0,0,0.653150243690884,0,0.606168477131288,0.430333232356058,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:219866695..219866701,- | |||
}} |
Revision as of 08:43, 21 January 2014
Short description: | p@chr2:219866695..219866701, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:219866695..219866701, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.42e-12 | 2 |
lung fibroblast | 4.33e-07 | 1 |
peptide hormone secreting cell | 5.43e-07 | 1 |
enteroendocrine cell | 5.43e-07 | 1 |
type D enteroendocrine cell | 5.43e-07 | 1 |
somatostatin secreting cell | 5.43e-07 | 1 |
pancreatic D cell | 5.43e-07 | 1 |
progenitor cell of endocrine pancreas | 5.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 9.19e-22 | 4 |
neuroendocrine gland | 9.19e-22 | 4 |
diencephalon | 1.66e-12 | 7 |
future diencephalon | 1.66e-12 | 7 |
pituitary gland | 4.19e-12 | 2 |
gastrointestinal system | 1.53e-11 | 25 |
pineal body | 2.01e-11 | 2 |
regional part of epithalamus | 2.01e-11 | 2 |
secretory circumventricular organ | 2.01e-11 | 2 |
circumventricular organ | 2.01e-11 | 2 |
epithalamus | 2.01e-11 | 2 |
small intestine | 6.92e-10 | 4 |
intestine | 7.48e-10 | 17 |
duodenum | 5.84e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.77e-12 | 4 |
breast cancer | 2.77e-12 | 4 |
carcinoma | 4.81e-11 | 106 |
gastrointestinal system cancer | 1.34e-09 | 14 |
cell type cancer | 2.37e-08 | 143 |
somatostatinoma | 5.43e-07 | 1 |