FFCP PHASE1:Hg19::chr2:233246540..233246555,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=250 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=439 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=68bp_to_AF217992_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_7_at_ALPP_5end | |||
|id=chr2:233246540..233246555,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.91e-21!3;CL:0000066!4.93e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.62e-42;29!UBERON:0003124;1.65e-16;1!UBERON:0006595;7.03e-08;86 | |||
|ontology_enrichment_disease=DOID:305!1.44e-15!106;DOID:0050687!1.11e-10!143;DOID:178!4.11e-08!1;DOID:326!4.11e-08!1;DOID:3978!4.11e-08!1;DOID:3394!4.11e-08!1;DOID:5844!4.11e-08!1;DOID:1749!7.67e-08!14;DOID:162!6.70e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.55e-11,106;DOID:0050687,6.49e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.62e-63!9;UBERON:0001557!5.87e-36!19;UBERON:0000476!1.91e-21!3;UBERON:0000920!1.91e-21!3;UBERON:0008947!1.09e-20!38;UBERON:0003258!1.09e-20!38;UBERON:0000065!5.56e-17!53;UBERON:0000072!9.85e-17!46;UBERON:0003124!3.32e-16!7;UBERON:0001004!5.00e-14!72;UBERON:0000077!3.65e-12!130;UBERON:0004119!1.01e-09!169;UBERON:0000925!1.01e-09!169;UBERON:0006595!1.01e-09!169;UBERON:0001041!1.20e-09!98;UBERON:0001007!1.57e-09!155;UBERON:0001555!1.57e-09!155;UBERON:0007026!1.57e-09!155;UBERON:0004921!3.63e-09!129;UBERON:0004185!3.63e-09!129;UBERON:0000063!2.86e-08!97;UBERON:0005631!3.56e-08!14;UBERON:0000158!3.56e-08!14;UBERON:0003343!1.52e-07!4;UBERON:0004785!1.52e-07!4;UBERON:0000064!8.75e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.62e-136;9!UBERON:0001557;1.62e-136;9!UBERON:0000072;1.60e-30;37!UBERON:0000065;9.49e-26;44!UBERON:0001004;1.70e-13;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.63e-136,9;UBERON:0001557,1.83e-64,19;UBERON:0008947,5.80e-32,38;UBERON:0003258,5.80e-32,38;UBERON:0000072,1.01e-25,47;UBERON:0000065,2.67e-22,54;UBERON:0001004,4.45e-16,74;UBERON:0001041,1.47e-13,87;UBERON:0004921,1.09e-09,118;UBERON:0003124,1.47e-09,7;UBERON:0004119,1.29e-08,160;UBERON:0000925,1.29e-08,160;UBERON:0006595,1.29e-08,160;UBERON:0001007,9.85e-08,145;UBERON:0001555,9.85e-08,145;UBERON:0007026,9.85e-08,145;UBERON:0001048,5.64e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14073800139454,3.03452442140583,2.16909926895134,3.52940712743661,3.26819166138609,3.32178866755535,3.50561401216427,2.94332197688019,3.46272441251751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.549585560411174,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66107110487917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p7@ALPP | |||
}} |
Revision as of 09:13, 21 January 2014
Short description: | p7@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 68bp_to_AF217992_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.63e-136 | 9 |
upper respiratory tract | 1.83e-64 | 19 |
respiratory primordium | 5.80e-32 | 38 |
endoderm of foregut | 5.80e-32 | 38 |
segment of respiratory tract | 1.01e-25 | 47 |
respiratory tract | 2.67e-22 | 54 |
respiratory system | 4.45e-16 | 74 |
foregut | 1.47e-13 | 87 |
subdivision of digestive tract | 1.09e-09 | 118 |
chorion | 1.47e-09 | 7 |
endoderm-derived structure | 1.29e-08 | 160 |
endoderm | 1.29e-08 | 160 |
presumptive endoderm | 1.29e-08 | 160 |
digestive system | 9.85e-08 | 145 |
digestive tract | 9.85e-08 | 145 |
primitive gut | 9.85e-08 | 145 |
primordium | 5.64e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.55e-11 | 106 |
cell type cancer | 6.49e-08 | 143 |