FFCP PHASE1:Hg19::chr20:5100567..5100581,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8729 | |||
|TSSclassifier=strong | |||
|UniProt=P12004 | |||
|association_with_transcript=65bp_to_NM_182649,uc002wlp.2_5end | |||
|coexpression_cluster_id=C1145 | |||
|description=CAGE_peak_2_at_PCNA_5end | |||
|id=chr20:5100567..5100581,- | |||
|ontology_enrichment_celltype=CL:0000012!2.30e-24!682;CL:0000548!3.25e-24!679;CL:0000004!3.25e-24!679;CL:0000255!3.25e-24!679;CL:0000066!4.16e-18!254;CL:0000003!1.96e-16!722;CL:0000063!1.38e-11!578;CL:0002321!3.85e-10!248;CL:0000144!4.17e-10!625;CL:0000220!9.57e-10!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.83e-18,253;CL:0002321,3.74e-10,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.80e-40!235;DOID:14566!4.29e-40!239;DOID:0050687!1.47e-20!143;DOID:0050686!1.11e-19!137;DOID:305!2.96e-18!106;DOID:2531!5.29e-16!51;DOID:0060083!5.29e-16!51;DOID:1240!6.19e-12!39;DOID:8692!1.80e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;5.98e-10;51!DOID:0060083;5.98e-10;51!DOID:1240;1.57e-09;39!DOID:8692;4.14e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.74e-40,235;DOID:14566,8.82e-40,239;DOID:0050687,2.57e-20,143;DOID:0050686,1.39e-19,137;DOID:305,3.66e-18,106;DOID:2531,4.32e-16,51;DOID:0060083,4.32e-16,51;DOID:1240,5.36e-12,39;DOID:8692,1.63e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.69e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.43e-07;9!UBERON:0001557;2.43e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.48e-07,9 | |||
|phase1_expression=2.18014055124668,2.78330681058278,1.55049844505568,1.0007329835313,1.78784437770915,0.872338524100369,0,3.79031924056099,1.30592814099919,20.6416506661267,6.28021051175185,14.8540133048517,7.12170841216825,1.11389717664042,0.994192127183747,5.3786011716142,5.42425075221579,5.84248072309899,9.75865597581014,24.6242116153576,16.116054608296,6.26909442956176,19.4640471249119,25.7323919137022,17.5759695432724,45.9244568545187,66.4193768650061,61.7879633312382,1.18009283054671,1.91914699048606,2.32224184974114,16.5495820406207,7.53014796945625,2.58827807116751,44.1563043307719,40.2338927939403,31.7088474481635,1.10799081706375,0.401088894940283,0.651032612147555,0.447830948479849,0.647787332037959,0.515151135268373,1.01778767145695,1.13362783106643,0.727752183563449,0.464858073811369,1.6446715520873,0.619412741790207,1.1507695692886,1.0246428261164,0.47296445977717,0.689491361473237,0.645484683583826,0,1.12945403725563,2.45615535052061,2.02251136000576,0.306083892370903,1.60464513538047,1.27867425159808,2.63881040149373,2.39356389145958,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,3.26623264833766,1.5644487552606,1.73751075764093,1.21079900526674,1.47311054395026,1.58231193720442,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0.39783335439818,0.730656615058536,1.75996244461323,1.09227722252426,1.77901850772711,3.84057200309856,0.800791974072025,0.574752439954483,3.96626923670917,1.90810750907073,0,0.587237189370939,1.14681968437569,1.32171328579026,2.24203425192614,30.2891697491339,3.73748563216283,2.75107533924415,2.87842098599313,7.85776528336187,1.95553359980154,0.946895611469467,0,13.8148966537615,3.82987679717288,3.32300841875432,1.89562704635511,34.3284736864809,22.6303264754188,37.9851559634492,37.0309023833037,38.2540073170269,1.03800594213442,0.535081656179426,0,29.2338104159721,0.766440987203842,1.03088233644789,1.77113784413652,0.95569624297229,1.95325036156926,2.85135613334512,1.35517607169996,0.76791966692651,1.24930726552346,1.18388626022008,0,2.62088766192152,3.7441627409691,3.18613688542158,0,10.0605128955545,5.88167784480239,19.8791533811511,4.51204119572301,4.49024208778554,9.54343136461319,1.45990461090791,11.7223173283444,7.53879951372717,9.48615685485761,2.5540919722054,5.82872461268068,18.168437696437,0.324547393654683,0.696518949197069,1.19662164466979,0.476981248610684,0,0.371457501329565,11.1306948125355,7.74211135595512,9.37279354340505,10.7408508965562,10.9069853414576,12.6554299292431,14.8386426241136,6.97725249757188,3.91342888955381,5.69025041699939,10.0707329277287,11.4040815857777,9.03029612928227,15.8095124548724,2.43042584364528,17.5027467436796,10.1038217681776,10.8107021263989,16.8648301212472,14.2389848935219,10.4424994040332,1.31780417436063,3.87780264148325,5.66922267785295,1.98788780678127,13.9293562831038,6.22323149822128,7.74458876021797,12.0587249947441,11.2135520028461,6.4049397437823,5.92002116201184,7.15785381419462,3.90660949002095,11.1154094117152,3.17850598054356,0.576175924479999,1.64025002283658,6.24320153660641,13.1208518955223,4.48346041655403,15.1490503250457,18.7772615467033,24.7193419795957,3.87892925384297,15.9684612505298,1.44656093646072,10.6920257155385,4.45080472701402,4.55080680969013,0.718618141816238,19.8636614465798,13.888155705788,13.576141658725,9.65750765937843,7.35570709917647,4.20666564938471,24.1610550130845,12.7366641339092,3.63047560991565,5.29829752898905,13.2040082277137,5.87399416659102,3.86460810068444,2.79175284497385,13.33333024706,7.79496041289589,5.3011092591264,3.12969655383818,4.20279747728911,3.90510551768276,9.97445772453639,14.4126503463914,5.60456474173561,6.81865301477087,7.4569194801141,15.8565817968474,23.1927094562599,19.055806630601,17.5187182975976,23.2135182805578,27.7382792897631,6.25798129319264,7.71889125831462,12.4321429217232,1.85747171212792,2.16563844500876,52.7648328177704,53.9471008249925,64.3499449788897,57.683747739042,49.4586338089762,59.0803841586631,54.8763424211869,50.6251380023393,54.249349129441,16.9775754563669,2.80483547606892,5.3504621473082,0,0,0,1.77236972004421,177.46816596469,15.7425201335185,8.23525489432923,2.96325770603289,1.1240175325762,19.3015627030331,6.38860271593854,1.95484983186195,15.5990217791937,18.7630744632855,6.14431146367907,8.21860859650752,12.2711480596913,15.2785219150282,18.454652766756,46.6220594795972,46.3582527531231,5.66299114001014,10.9982004615442,15.0117473911616,11.2480600784132,3.19166043577833,8.22295564005842,12.0904005648845,23.250715081117,26.4534048623996,17.243213326358,15.2323790842881,0.829312462163088,0.288239906833923,1.00993946741104,44.7660154759792,17.9534560012391,8.20522130470329,10.2643467613623,49.254369004892,50.757976775622,7.14566081576446,16.3711383144227,8.28324130783232,35.202377194056,7.75630294546667,3.57656445851882,14.370146793452,3.98907174877306,5.2003718455683,29.8360554144085,18.4403871630262,27.4414844386582,1.14382394926518,0,16.4648067356154,20.5213796105053,1.77695974371273,48.3090642489392,3.01439377059586,5.22920075160176,8.19778527692868,3.64871341923571,6.02708509718552,14.7583757638122,4.31324739884849,2.29723871668228,11.4109524032575,11.8720671467415,7.80810025691457,22.203559441747,34.4101392060129,1.97030760201927,3.23441362289276,2.82354679815446,16.2620559502377,5.20559415430487,15.4657762555539,8.54332953205179,7.65526501983796,0.749007023947182,0,0.414415513436035,0.613457458595699,4.00136416847742,1.08506009479894,1.45579603071565,3.7470087647404,2.36553622550902,3.5142424497814,3.91229929646035,11.3703752027992,1.03473071292505,13.2845119707087,9.95593510125197,14.3357963872337,0.195801157462741,1.02943027143257,0.206768026122887,1.50999940573032,1.28073069364133,14.2469958579742,9.98612637062982,15.7242952531434,1.98486246255021,3.52962538562544,3.36792113319688,1.92208723883551,4.09365799253363,2.2519548960105,1.48418066444991,23.9025025394116,15.2703083769289,23.9811295560323,14.0198695879578,23.2420756919918,23.0841548719998,5.61418116849198,0.552485933615378,28.3591686966579,18.9374814726986,8.26083814244372,4.06079651616671,10.7051318575137,7.84349769176855,13.1525302187935,5.91089121800104,9.09867072567173,9.35515379020836,19.8642642813968,3.08454505380579,10.5669110642103,3.01013864312912,25.4876273045038,6.64860807142979,14.3279843022194,55.6920086680674,47.8426875375568,26.6708130121045,8.52838078819235,5.20605431462885,1.75169719801128,13.5522807931148,17.5745234830852,8.61398306994258,4.55042172225565,11.2478750890912,4.73686519631398,18.177736819528,16.578396870422,23.0187076049166,7.08973616130606,7.68588477745411,21.3066568540252,7.03353081609225,1.65284915360978,1.34533047155574,7.14631189969671,1.8208400553999,5.11330104227014,1.88887408098384,7.6674099717666,5.85263802334569,2.12922412126809,6.08953094452551,1.66791797193528,3.43499728180779,9.67611760335135,12.3387975640303,4.00323407240032,14.8420718960574,1.71175595213568,8.59148769400029,1.56989728039846,12.7709444884153,15.3740736652191,17.671860351853,4.65019707618627,0,6.31887684358472,9.26504104270222,3.41198885483798,3.16950440270266,14.0594908750225,11.8780562841119,9.04064932961942,9.92457618383023,9.28814565337708,2.63070531152258,13.3118372881338,3.27947376023316,4.8698490471049,8.675057946793,9.85934608862845,16.63571685567,1.3754865741837,5.7067368237,15.6094868191063,3.16661452946496,2.63435914367922,16.3173464719257,4.54915136318478,7.79399113076648,10.7248364085726,3.26672954583968,1.88287601553558,5.16606447205476,1.68471475667626,3.10401107475673,1.60806380144872,0,0,0,0.952927101831156,1.23408681925858,0,0.540031437238115,1.58625035258854,41.9818599530969,2.88743956579008,17.1528151186722,22.8537905404634,47.6088402822268,34.4326521806324,57.393458182376,26.5440564005646,41.7481706888559,17.5689073660823,13.9587434318059,17.9710193992614,25.5622840517175,33.372817799654,22.557102938106,52.8190346741002,42.7164279775841,29.2609575427019,12.7753871307098,16.1447512035209,13.8258343938806,12.5258620419753,15.8506684626313,49.4331881367162,49.8347051272484,6.15436994738562,16.768252065511,49.2946512636774,7.04935025439248,15.7198053942905,1.02555725490326,16.3836704361843,11.3672251963028,26.4246616529964,1.43246690842614,29.1025387215986,0.307160702099232,1.9882952955326,0.281338832821026,3.00533503561846,23.0725423917463,13.3009007120636,0,8.28851746593443,18.1391578455079,8.590569330181,30.2788621434231,2.48831670129446,25.9719534815775,13.7846304500219,18.4166053281674,0.197286811273867,4.7896618469388,4.44547960578548,0.969332746095218,0.185536196323703,1.99613798001194,4.94812746061943,9.18329999960055,0.724999575434793,22.6448962088144,26.4423796304477,44.2044964906041,18.9608855282806,31.2016936320082,26.9118742146603,0,0.482385754501632,0,0.221158519862449,0,1.09692698576986,21.1340619226841,21.1924091303477,0.615602068030377,21.9908167784712,22.3646987256418,35.5440271862698,12.1685056552649,1.91400695839152,8.24378340616761,1.06606955203727,86.864303466376,21.1923346133283,12.798299506312,6.9934654791326,8.82281404429828,9.23018728367135,11.9544851616237,27.9728379005467,20.6778103237466,33.4627256726253,40.4269784301071,7.3572137512311,3.98104772431402,1.76915129006678,0.611030144933625,53.3738031625119,92.5493902709306,94.5018643024371,0.606610196826093,0.802577647298789,0.468528891450678,45.0663329362695,8.60924323301195,7.04063100648869,0.394584402849391,4.83962864194656,2.14250933141343,4.35987399436567,15.0323419414493,32.4544039073384,5.98188485436467,4.63388738225698,5.96472544973728,3.58417289318877,9.67672456501295,6.37903495860438,22.2156465068968,22.2442742130637,34.5625050124198,0.34945333648406,18.7464775394062,35.1225482579379,36.1061226405757,39.9902275849129,3.29762656060626,1.94163478721301,0.451961481561065,27.1343010800567,14.7048812660212,0.443175571691151,46.3456777081483,2.56508224804908,2.13452994739353,9.19124204077799,8.64542502924636,16.7223430402237,8.57974989309823,9.65167146520603,4.10033367365927,8.24929121158784,22.9678108264408,24.2678603444613,27.5395187618069,5.77901179803038,0,0.410716136675979,2.55493176133945,6.0167161798794,44.1650755189248,0.558564802544508,0.229160424011684,0,10.5829870264465,0,0.223171457441873,1.74677028465488,1.80149941771202,3.49487848582361,71.7714790818807,71.4545492164713,63.7637524860589,6.29935881694392,46.8243526323788,0,0,26.5242694967282,39.3362788668089,32.4043463662764,6.29926896344201,2.32140586367385,0.607495566580247,17.1071690675626,0.630445658393585,2.36045646607491,0.950403028674658,2.86859742932552,9.59575986597226,0,0.662091970365432,20.0872144747252,11.402991636828,3.45688596480507,15.3496059251422,9.578415324999,7.71669695043786,9.71211724176904,21.4159852973038,0.58620893471233,9.27548222385549,0.517131825446202,0.26446520348538,11.4628181382501,2.81926008926669,1.9221734262185,1.10043013569766,0.828478110694391,0.992332043623902,13.0423677052643,43.9671280155034,5.74507131993164,0.544017803369474,1.0027595760908,0,0.983617892129413,5.9680556575089,0,0.488105059607853,0.751145584238999,0,0.332787154610557,0.496771223531068,13.2814689538782,42.7432995230405,15.6198591067897,7.42209867216915,1.88212655758537,37.4667924645505,20.1440229769047,14.4777158800268,2.33713309847224,12.2057289530575,2.27283606330107,2.76724691927833,5.33886732957922,6.17868184671694,4.38569678913393,11.346915642543,18.0383282987353,8.76132219400363,2.24901556081802,7.14209601630793,12.4411862352257,3.72178400381193,2.08698024724694,2.70463696194993,2.66563648518157,27.2603391247123,4.36436782086143,2.36303225493475,0.928067519756987,3.18476710958893,43.6030263482837,3.77735275701072,3.70424437642511,3.78554694685953,4.04501643855337,55.5403721661058,3.65392008751296,25.6177695828868,11.5761237161917,5.13947079463582,22.027927453023,21.6161013012681,37.2782884283802,51.946608908089,20.8347161332588,18.7526109124911,23.830461228679,49.0511085258302,9.11579868532147,0.829550616910385,2.72804432375144,2.12583744501381,2.45348091383766,13.1043939538565,35.1455259517819,5.28280308396568,49.5968741720226,35.7417294475372,3.09986963389468,15.8904466998714,10.8622510648586,0.559518030877778,0.622077260032973,2.42999305476938,16.605020955089,4.87524419753279,9.61044816089722,17.1429855253565,12.3293453658976,17.7228142890373,12.8488331133846,3.18004350653419,14.1951141002256,24.0171224485641,4.58478726797889,8.88111884324281,0.385375350578757,0,1.11743701340006,0.615349092722265,1.76450187355203,0.345786262321089,0.484426936895553,1.42769420259154,3.23887471053385,12.9766695682514,17.2422882610378,13.6320286057399,5.72073143200751,3.4517996303005,8.35448132888354,0.601682626794058,6.25285712980912,1.56302802246618,58.92900625832,33.4094711720597,7.39280431085226,0.540300676947157,0,0.206686796501184,0.380494861163441,2.18789923607288,0,0.496211178389294,5.27613733078862,9.96546935588843,0,0,0,0.227662191351298,4.70122561861986,29.0389648640564,13.3760647361186,0.679697329768317,0.328863867814245,14.3014547469602,20.1328837424645,0.39246546425257,0,5.88571542958957,5.47895232305697,52.0385494836878,5.7330202546446,0.643288897589907,34.4469673577344,38.5921532222176,12.3439373334831,0.801711364730253,4.14432328326074,5.97514669828825,0,0,3.54996002191696,3.32332278560715,0.846774100381858,8.7060610046739,4.34288939930048,10.5109283287518,11.856675770566,19.1392955549724,20.6041293220035,0,0.410651227424988,2.3196288626764,1.45713297917742,36.2606168366264,19.6961267409755,10.464967988426,18.2972652903115,6.81631203821661,25.6636834063345,2.54674721756217,6.33822725461476,28.6893550780529,0,0.707029641304878,0.196308467114945,0.297046400327086,2.113278637917,6.28730324344923,4.79317981697253,4.89879948599187,43.3744616714192,6.60649572840933,0.705789743431384,10.9930672364161,2.92134555298607,0.458729283404541,0.143339583151451,17.6704149656367,0.203974470572744,2.61810414204226,1.0580536810308,3.71995018166751,2.77305377178851,10.3830374909709,10.0933139868063,13.8767276393893,30.0275447397106,24.5793079678176,15.4986095054025,6.98401236464821,10.028301571695,3.71315621269373,7.502995644373,0,0.413731983447581,2.34557380091079,4.99935306073855,22.3477628032581,13.5943624307929,18.9502847761237,0.318235791390825,2.82964064541507,6.7492191848058,1.71116650542641,9.09252715696932,1.43444410785353,1.33064142618405,31.0146453407813,7.04400482792922,1.9307228228694,0.359300808426348,0,0.244482888365733,3.25516942652591,0,4.42802345900258,24.3632054150457 | |||
|short_description=p2@PCNA | |||
}} |
Revision as of 10:05, 21 January 2014
Short description: | p2@PCNA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCNA_5end |
Coexpression cluster: | C1145_Hodgkin_chronic_acute_Reticulocytes_lymphoma_diffuse_Hep2 |
Association with transcript: | 65bp_to_NM_182649, uc002wlp.2_5end |
EntrezGene: | PCNA |
HGNC: | 8729 |
UniProt: | P12004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.83e-18 | 253 |
embryonic cell | 3.74e-10 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.74e-40 | 235 |
disease of cellular proliferation | 8.82e-40 | 239 |
cell type cancer | 2.57e-20 | 143 |
organ system cancer | 1.39e-19 | 137 |
carcinoma | 3.66e-18 | 106 |
hematologic cancer | 4.32e-16 | 51 |
immune system cancer | 4.32e-16 | 51 |
leukemia | 5.36e-12 | 39 |
myeloid leukemia | 1.63e-08 | 31 |