FFCP PHASE1:Hg19::chr20:52687059..52687143,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8537 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=974 | |||
|TSSclassifier=strong | |||
|UniProt=G3XAF7,O75363 | |||
|association_with_transcript=0bp_to_ENST00000371435,ENST00000395961_5end | |||
|coexpression_cluster_id=C3948 | |||
|description=CAGE_peak_3_at_BCAS1_5end | |||
|id=chr20:52687059..52687143,- | |||
|ontology_enrichment_celltype=CL:0000223!2.89e-11!59;CL:0002076!9.09e-10!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;1.98e-13;86!UBERON:0001041;5.58e-12;30!UBERON:0009497;8.96e-12;13!UBERON:0004161;4.06e-08;11 | |||
|ontology_enrichment_disease=DOID:305!1.70e-13!106;DOID:299!1.87e-11!25;DOID:7!9.26e-10!39;DOID:5093!5.15e-08!4;DOID:1612!5.15e-08!4;DOID:0050687!2.91e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.37e-12;4!DOID:1612;2.37e-12;4!DOID:299;3.38e-11;25!DOID:7;1.72e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.36e-12,106;DOID:5093,2.02e-12,4;DOID:1612,2.02e-12,4;DOID:299,3.59e-11,25;DOID:7,7.07e-09,39;DOID:0050687,1.29e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.84e-23!169;UBERON:0000925!2.84e-23!169;UBERON:0006595!2.84e-23!169;UBERON:0004921!3.84e-21!129;UBERON:0004185!3.84e-21!129;UBERON:0001007!3.86e-21!155;UBERON:0001555!3.86e-21!155;UBERON:0007026!3.86e-21!155;UBERON:0000077!3.73e-15!130;UBERON:0005911!2.53e-11!82;UBERON:0001041!2.09e-10!98;UBERON:0000161!4.70e-10!35;UBERON:0007023!2.21e-09!115;UBERON:0001004!3.62e-09!72;UBERON:0005409!6.77e-09!35;UBERON:0003929!6.97e-09!54;UBERON:0000466!1.03e-08!126;UBERON:0000160!4.82e-08!27;UBERON:0002294!6.05e-08!7;UBERON:0001173!6.05e-08!7;UBERON:0004912!6.05e-08!7;UBERON:0001046!7.30e-07!19;UBERON:0000166!8.76e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;4.17e-21;33!UBERON:0005409;2.29e-19;22!UBERON:0000160;4.61e-18;17!UBERON:0002108;6.24e-10;4!UBERON:0002294;1.46e-09;7!UBERON:0001173;1.46e-09;7!UBERON:0001007;1.46e-09;81!UBERON:0000059;2.21e-09;11!UBERON:0001555;1.06e-08;54!UBERON:0002423;1.40e-08;25!UBERON:0001155;3.58e-08;9!UBERON:0003127;4.72e-07;2!UBERON:0006562;5.62e-07;2!UBERON:0000341;7.51e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.15e-24,118;UBERON:0001007,4.60e-22,145;UBERON:0001555,4.60e-22,145;UBERON:0007026,4.60e-22,145;UBERON:0004119,3.55e-20,160;UBERON:0000925,3.55e-20,160;UBERON:0006595,3.55e-20,160;UBERON:0000160,4.90e-18,17;UBERON:0005409,1.01e-16,25;UBERON:0001041,6.02e-12,87;UBERON:0002108,6.76e-10,4;UBERON:0011216,9.30e-10,223;UBERON:0000059,2.20e-09,11;UBERON:0009497,1.45e-08,25;UBERON:0000015,1.45e-08,25;UBERON:0002423,1.45e-08,25;UBERON:0006235,1.45e-08,25;UBERON:0004161,1.45e-08,25;UBERON:0009856,3.12e-08,26;UBERON:0001155,3.55e-08,9;UBERON:0005911,4.84e-08,82;UBERON:0009854,1.09e-07,23;UBERON:0007023,2.42e-07,114;UBERON:0002294,2.65e-07,9;UBERON:0001173,2.65e-07,9;UBERON:0004912,2.65e-07,9;UBERON:0003127,4.93e-07,2;UBERON:0000341,7.62e-07,2;UBERON:0007499,7.74e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.127577940803,0,0,0,0,0,0,0,0,0,0,0,0,0,60.8457386428642,63.5279759950206,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.601519410909855,0.276242966807689,0,0,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0,1.33732061132974,0,0,0.593929361665277,0,0,0,0,0,0,2.78947183551498,22.1027132424918,0,0,0,0,1.3480252672099,4.29650819221462,0,9.86434056369336,0,0,0,0,0,8.85454387689793,3.84823999983261,0,0.455173793141999,3.30529745380596,0.472775363535873,0,0,0,0,0,0,0,0,0,0,12.9664082179101,3.84751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,1.41353071433941,0,64.6920255201028,25.829608834975,88.5993710153757,0.296521128680622,0,0,0.202203398942031,0,0,0,5.47860933009851,0,0,31.4575861726526,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,3.12407529003236,3.72371110174635,0,0.34945333648406,0,0,0,0,3.87956065953678,0,7.45736444575757,0,0,0.0633107959558787,1.36885967914362,0.0801588202515337,39.0618980373015,0,16.282217138414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19486400798386,0,0,0,0,2.32991899054908,1.3393140992228,2.30764403467266,1.95470277177136,0.492137407573744,0,0,0,0.160753148465019,0,0,0,0,0,2.0126081255956,0.788057072991982,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,3.25064991980226,16.2107455132835,2.66968531419237,6.28817220398664,2.07119527673598,0,0,0,0,0,0,0,0,13.1925440850197,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0.11796972334774,1.46742878817343,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,3.10497781055795,0,0,0,0,0,0.548257766857182,4.46590060550365,0,14.0538670403555,0,0,0,0.682986574053893,0,0,0,0,0,0,0.333694205676207,24.9608035264635,0,0,45.6579360254748,0.647782773655864,0,0.357382720883282,0,0,0,0,0.62164849248911,0.17071847709395,0,15.48818491753,0,0,0,1.3746412112643,0,0,0,0.687051635306701,1.5849330247695,0,0,0,4.37139893753226,0,0,0.118920090777569,0,0,0,31.9501014566891,21.2002773688839,5.17349025997675,3.67722482630858,0,0,0,0,0,0,0,0,8.74914299167722,0,0,115.39314934295,6.88093925106811,0,0,0,0,56.6058719351479,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,10.661699095049,8.33225510123091,0.322944549180031,0.186224142887574,0,0,0.202117188958219,3.04803447055746,6.84466602170562,13.7398188149759,32.7770478644531,8.31650891365033,0,0,0,0,0,0.366724332548599,0.406896178315738,16.6439193546378,0.201273793591026,0 | |||
|short_description=p3@BCAS1 | |||
}} |
Revision as of 12:19, 21 January 2014
Short description: | p3@BCAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BCAS1_5end |
Coexpression cluster: | C3948_stomach_colon_temporal_MCF7_rectum_duodenum_small |
Association with transcript: | 0bp_to_ENST00000371435, ENST00000395961_5end |
EntrezGene: | BCAS1 |
HGNC: | 974 |
UniProt: | G3XAF7O75363 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.15e-24 | 118 |
digestive system | 4.60e-22 | 145 |
digestive tract | 4.60e-22 | 145 |
primitive gut | 4.60e-22 | 145 |
endoderm-derived structure | 3.55e-20 | 160 |
endoderm | 3.55e-20 | 160 |
presumptive endoderm | 3.55e-20 | 160 |
intestine | 4.90e-18 | 17 |
gastrointestinal system | 1.01e-16 | 25 |
foregut | 6.02e-12 | 87 |
small intestine | 6.76e-10 | 4 |
organ system subdivision | 9.30e-10 | 223 |
large intestine | 2.20e-09 | 11 |
epithelium of foregut-midgut junction | 1.45e-08 | 25 |
anatomical boundary | 1.45e-08 | 25 |
hepatobiliary system | 1.45e-08 | 25 |
foregut-midgut junction | 1.45e-08 | 25 |
septum transversum | 1.45e-08 | 25 |
sac | 3.12e-08 | 26 |
colon | 3.55e-08 | 9 |
endo-epithelium | 4.84e-08 | 82 |
digestive tract diverticulum | 1.09e-07 | 23 |
adult organism | 2.42e-07 | 114 |
biliary system | 2.65e-07 | 9 |
biliary tree | 2.65e-07 | 9 |
biliary bud | 2.65e-07 | 9 |
open tracheal system trachea | 4.93e-07 | 2 |
throat | 7.62e-07 | 2 |
epithelial sac | 7.74e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.36e-12 | 106 |
thoracic cancer | 2.02e-12 | 4 |
breast cancer | 2.02e-12 | 4 |
adenocarcinoma | 3.59e-11 | 25 |
disease of anatomical entity | 7.07e-09 | 39 |
cell type cancer | 1.29e-07 | 143 |