FFCP PHASE1:Hg19::chr21:46964306..46964332,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6573 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10937 | |||
|TSSclassifier=strong | |||
|UniProt=C9J8K6,E9PIL5 | |||
|association_with_transcript=0bp_to_ENST00000443742,ENST00000528477,uc010gpy.1_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_8_at_SLC19A1_5end | |||
|id=chr21:46964306..46964332,- | |||
|ontology_enrichment_celltype=CL:0000775!2.40e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.64e-17;3!CL:0000039;4.92e-08;7!CL:0000586;4.92e-08;7!CL:0000094;3.90e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.28e-17,3;CL:0000039,4.58e-08,7;CL:0000586,4.58e-08,7;CL:0000094,3.56e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.08e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.69e-18!115;UBERON:0000178!1.85e-07!15;UBERON:0000179!1.85e-07!15;UBERON:0000463!1.85e-07!15;UBERON:0006947!1.95e-07!3;UBERON:0004054!1.95e-07!3;UBERON:0001896!4.59e-07!3;UBERON:0005290!4.59e-07!3;UBERON:0010096!4.59e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.64e-17;3!UBERON:0005290;1.64e-17;3!UBERON:0001000;4.53e-14;1!UBERON:0005352;4.53e-14;1!UBERON:0002298;3.14e-09;6!UBERON:0000341;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.18e-17,3;UBERON:0005290,1.18e-17,3;UBERON:0010096,1.18e-17,3;UBERON:0001000,4.53e-14,1;UBERON:0005352,4.53e-14,1;UBERON:0002298,2.66e-09,6;UBERON:0000341,1.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.21349085126742,0,0,0,0,0.507447609232169,0,0.569647187174163,0.952927101831156,0.411362273086194,1.29694662238543,1.08006287447623,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0.50787533340481,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,1.84451123510448,2.78248697670294,0.325942115766024,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0.163232808159148,0.424059214301822,0,0,0.176915129006678,0,0,0,0,0.404406797884062,0,0,0,0,0,3.94584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.229073192331831,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0.544017803369474,0.5013797880454,0.306345576763462,0.983617892129413,0.314108192500469,0,0,0.250381861413,2.86704597845036,1.99672292766334,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785720083444267,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,16.0551289994376,0,0,0,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0.560544326627578,0,0,0,0.142953088353313,0.47404083519818,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0,0,0.407948941145488,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,1.42838658878244,0,0,0,0.0636471582781649,1.0105859447911,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p8@SLC19A1 | |||
}} |
Revision as of 14:17, 21 January 2014
Short description: | p8@SLC19A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SLC19A1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000443742, ENST00000528477, uc010gpy.1_5end |
EntrezGene: | SLC19A1 |
HGNC: | 10937 |
UniProt: | C9J8K6E9PIL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.28e-17 | 3 |
germ line cell | 4.58e-08 | 7 |
germ cell | 4.58e-08 | 7 |
granulocyte | 3.56e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.18e-17 | 3 |
myelencephalon | 1.18e-17 | 3 |
future myelencephalon | 1.18e-17 | 3 |
vas deferens | 4.53e-14 | 1 |
spermatic cord | 4.53e-14 | 1 |
brainstem | 2.66e-09 | 6 |
throat | 1.87e-07 | 2 |