FFCP PHASE1:Hg19::chr22:44708700..44708718,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85352 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29335 | |||
|TSSclassifier=strong | |||
|UniProt=Q3SXP7 | |||
|association_with_transcript=12bp_to_ENST00000381176,NM_001099294,uc003bet.2_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_4_at_KIAA1644_5end | |||
|id=chr22:44708700..44708718,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;3.06e-12;3!CL:1000428;3.06e-12;3!CL:0002559;7.25e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,3.24e-12,3;CL:1000428,3.24e-12,3;CL:0002559,7.49e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.26e-28!3;UBERON:0004054!2.26e-28!3;UBERON:0005904!1.89e-21!4;UBERON:0007023!1.12e-17!115;UBERON:0004175!1.95e-17!25;UBERON:0003133!3.39e-14!48;UBERON:0005156!4.97e-14!59;UBERON:0000990!4.97e-14!59;UBERON:0003135!1.31e-13!11;UBERON:0006834!7.40e-11!1;UBERON:0001000!9.84e-11!1;UBERON:0005352!9.84e-11!1;UBERON:0000998!1.30e-10!1;UBERON:0006868!1.30e-10!1;UBERON:0001301!1.43e-10!1;UBERON:0000996!1.57e-10!1;UBERON:0001154!2.28e-10!1;UBERON:0001153!2.28e-10!1;UBERON:0003101!2.36e-10!22;UBERON:0000079!2.36e-10!22;UBERON:0001046!5.66e-08!19;UBERON:0003975!6.06e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.58e-34;1!UBERON:0001000;8.34e-34;1!UBERON:0005352;8.34e-34;1!UBERON:0001255;8.34e-18;2!UBERON:0001556;8.34e-18;2!UBERON:0004175;6.85e-15;21!UBERON:0000412;3.06e-12;3!UBERON:0001992;3.06e-12;3!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0005904;1.63e-09;4!UBERON:0000995;8.39e-09;17!UBERON:0003975;2.29e-08;18!UBERON:0002073;7.25e-08;5!UBERON:0000002;8.25e-07;6!UBERON:0001560;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,2.58e-34,1;UBERON:0001000,7.06e-34,1;UBERON:0005352,7.06e-34,1;UBERON:0001255,7.67e-18,2;UBERON:0001556,7.67e-18,2;UBERON:0004175,1.23e-12,25;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0000412,3.24e-12,3;UBERON:0001992,3.24e-12,3;UBERON:0005904,1.57e-09,4;UBERON:0002073,7.49e-08,5;UBERON:0005086,7.49e-08,5;UBERON:0007023,1.08e-07,114;UBERON:0000995,2.69e-07,21;UBERON:0005795,5.24e-07,22;UBERON:0003975,5.24e-07,22;UBERON:0003133,6.38e-07,48;UBERON:0000002,8.48e-07,6;UBERON:0001560,8.48e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,3.84709281984041,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,3.53971189117467,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941917114206168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.84474629612498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03396765803459,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p4@KIAA1644 | |||
}} |
Revision as of 16:29, 21 January 2014
Short description: | p4@KIAA1644 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KIAA1644_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 12bp_to_ENST00000381176, NM_001099294, uc003bet.2_5end |
EntrezGene: | KIAA1644 |
HGNC: | 29335 |
UniProt: | Q3SXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 3.24e-12 | 3 |
stem cell of epidermis | 3.24e-12 | 3 |
hair follicle cell | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 2.58e-34 | 1 |
vas deferens | 7.06e-34 | 1 |
spermatic cord | 7.06e-34 | 1 |
urinary bladder | 7.67e-18 | 2 |
lower urinary tract | 7.67e-18 | 2 |
internal genitalia | 1.23e-12 | 25 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
dermal papilla | 3.24e-12 | 3 |
papillary layer of dermis | 3.24e-12 | 3 |
duct of male reproductive system | 1.57e-09 | 4 |
hair follicle | 7.49e-08 | 5 |
hair follicle placode | 7.49e-08 | 5 |
adult organism | 1.08e-07 | 114 |
uterus | 2.69e-07 | 21 |
embryonic uterus | 5.24e-07 | 22 |
internal female genitalia | 5.24e-07 | 22 |
reproductive organ | 6.38e-07 | 48 |
uterine cervix | 8.48e-07 | 6 |
neck of organ | 8.48e-07 | 6 |