FFCP PHASE1:Hg19::chr3:123518869..123518898,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7590 | |||
|TSSclassifier=weak | |||
|UniProt=Q06S79 | |||
|association_with_transcript=136bp_to_ENST00000360367,ENST00000506361,uc010hrs.1_5end | |||
|coexpression_cluster_id=C1511 | |||
|description=CAGE_peak_9_at_MYLK_5end | |||
|id=chr3:123518869..123518898,- | |||
|ontology_enrichment_celltype=CL:0000136!4.09e-08!15;CL:0002620!2.74e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.72e-13;12!CL:0000136;1.07e-11;13!CL:0002622;1.61e-11;3!CL:0002598;3.26e-08;2!CL:0002600;5.86e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.86e-13,12;CL:0002622,1.64e-11,3;CL:0000136,7.21e-10,15;CL:0002598,3.38e-08,2;CL:0002600,4.77e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.21e-10;11!UBERON:0001041;2.52e-09;30!UBERON:0009497;6.82e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;2.50e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.90e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.77e-14!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.63e-13;19!UBERON:0006925;2.63e-13;19!UBERON:0002423;1.10e-09;25!UBERON:0002367;8.46e-08;11!UBERON:0010147;8.46e-08;11!UBERON:0002365;2.73e-07;31!UBERON:0002330;2.73e-07;31!UBERON:0003937;4.09e-07;12!UBERON:0005399;4.09e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.74e-13,19;UBERON:0006925,2.74e-13,19;UBERON:0008836,2.74e-13,19;UBERON:0008835,3.12e-11,22;UBERON:0003894,3.12e-11,22;UBERON:0009854,1.15e-10,23;UBERON:0007499,1.14e-09,25;UBERON:0009497,1.14e-09,25;UBERON:0000015,1.14e-09,25;UBERON:0002423,1.14e-09,25;UBERON:0006235,1.14e-09,25;UBERON:0004161,1.14e-09,25;UBERON:0003929,2.19e-09,54;UBERON:0009856,3.12e-09,26;UBERON:0005911,3.51e-09,82;UBERON:0009569,5.36e-09,112;UBERON:0002530,2.55e-08,59;UBERON:0002367,8.23e-08,11;UBERON:0010147,8.23e-08,11;UBERON:0009846,8.23e-08,11;UBERON:0003353,8.23e-08,11;UBERON:0004902,8.23e-08,11;UBERON:0003820,8.23e-08,11;UBERON:0009847,8.23e-08,11;UBERON:0005177,1.30e-07,101;UBERON:0002365,1.82e-07,31;UBERON:0002330,1.82e-07,31;UBERON:0003937,3.99e-07,12;UBERON:0005399,3.99e-07,12;UBERON:0002100,4.62e-07,199 | |||
|phase1_expression=0.363356758541113,2.14100523890983,0.140954404095971,1.0007329835313,1.34088328328186,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.495065411840187,1.32558950291166,0,0,0,0,0.246242116153576,0.816002764977012,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50401373190767,2.75208386025565,0,0,0.567208902984407,0.886917589850256,0.87834785693126,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0,0,0,1.72852777344,0,0,0,0,0,0,0,0.408308342509787,0,0.309977343527296,0,2.22540236350701,0,0,0.168336113954066,0,0,0.438977620880838,0,1.50238058906597,0,1.07633781413317,1.49490172172997,1.05965950579781,0.900273288253207,0.824420233907511,2.06112432036503,1.48893485065272,0.337552664482532,0.292311015483596,2.27190396819703,2.30124746605748,0,0.710019185033229,0.201504196455281,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.2808055714929,9.82827216677626,21.859226547212,0,0.614942192715568,0.514703430895577,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,3.19125739901845,3.12022310734098,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,0.207970861530807,0.713715955188647,0.630809660135739,0.702848489956279,0.300946099727719,0,0,0,0,7.99329253106362,1.37060810223918,0.343143423810856,0,0,0,0,0,0,0.744323423456331,1.38115775959256,0.841980283299221,0,0.511707249066704,0,0,0,0,0,0,0,0.604297247958111,0,0,4.93702127107809,5.28064387219479,29.6341177808299,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.984043937099117,0.650756789328606,15.3531107355106,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.290033387828457,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0.190630193923825,3.07077349573601,24.8204613059674,1.90921948755562,0,0.719489830333259,0,0,0,0,0,0.975267478179181,0,0,4.7774968992795,0.282810863907425,0,0,0,0,2.89387767133344,12.462000288886,0,0,0,0,0,0,0,1.26664581178598,0.987884678879706,0,0,0,0,0,14.5922891204008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,1.30586246527318,0.424059214301822,0,0,0,0.611030144933625,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0,1.95878396848313,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0.273810757783986,0,0,0,0.837847203816763,0.687481272035051,0,0,0,0,0,0,0,2.59984501613838,3.70871362715249,3.16796656114669,1.18112977817699,0,0,0.272406812223151,0,0,0,0,0,0,0,2.20655980437755,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3190292097603,5.30027555648885,0.129282956361551,0.13223260174269,1.19760786519031,0,6.51403216662938,5.50215067848831,2.89967338743037,0,0,0,0,10.33633826402,3.0082787282724,7.65863941908654,2.62298104567844,0,0,0,0.1251909307065,0.573409195690071,0.443716206147409,0.372578417648301,0,0.124980407962107,0,0,0,0,0,0,0,0,0.947015026375446,3.0188148210309,2.66943366478961,0,0.151230923763239,0,0,0,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.694567422971502,0,0.179088841081487,0.926404341482917,0,0,0,0.168942440653073,0,0,2.43087964941906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0.679697329768317,0,0,0,2.66876515691748,0,0,0,0,0,0.428859265059938,0,0,0,2.40513409419076,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0.121917924982269,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,1.9307228228694,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p9@MYLK | |||
}} |
Revision as of 21:00, 21 January 2014
Short description: | p9@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MYLK_5end |
Coexpression cluster: | C1511_Prostate_Smooth_Hepatocyte_liver_Pancreatic_lung_mature |
Association with transcript: | 136bp_to_ENST00000360367, ENST00000506361, uc010hrs.1_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | Q06S79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.86e-13 | 12 |
prostate stromal cell | 1.64e-11 | 3 |
fat cell | 7.21e-10 | 15 |
bronchial smooth muscle cell | 3.38e-08 | 2 |
smooth muscle cell of trachea | 4.77e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.74e-13 | 19 |
digestive gland | 2.74e-13 | 19 |
liver bud | 2.74e-13 | 19 |
hepatic diverticulum | 3.12e-11 | 22 |
liver primordium | 3.12e-11 | 22 |
digestive tract diverticulum | 1.15e-10 | 23 |
epithelial sac | 1.14e-09 | 25 |
epithelium of foregut-midgut junction | 1.14e-09 | 25 |
anatomical boundary | 1.14e-09 | 25 |
hepatobiliary system | 1.14e-09 | 25 |
foregut-midgut junction | 1.14e-09 | 25 |
septum transversum | 1.14e-09 | 25 |
gut epithelium | 2.19e-09 | 54 |
sac | 3.12e-09 | 26 |
endo-epithelium | 3.51e-09 | 82 |
subdivision of trunk | 5.36e-09 | 112 |
gland | 2.55e-08 | 59 |
prostate gland | 8.23e-08 | 11 |
male accessory sex gland | 8.23e-08 | 11 |
embryonic cloacal epithelium | 8.23e-08 | 11 |
epithelium of hindgut | 8.23e-08 | 11 |
urogenital sinus epithelium | 8.23e-08 | 11 |
prostate bud | 8.23e-08 | 11 |
prostate field | 8.23e-08 | 11 |
trunk region element | 1.30e-07 | 101 |
exocrine gland | 1.82e-07 | 31 |
exocrine system | 1.82e-07 | 31 |
sex gland | 3.99e-07 | 12 |
male reproductive gland | 3.99e-07 | 12 |
trunk | 4.62e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.90e-07 | 2 |