FFCP PHASE1:Hg19::chr3:128722834..128722850,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:128722834..128722850,- | |||
|id=chr3:128722834..128722850,- | |||
|ontology_enrichment_celltype=CL:0000066!9.52e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.56e-19;1!CL:0000164;1.56e-19;1!CL:0000502;1.56e-19;1!CL:0000172;1.56e-19;1!CL:0000173;1.56e-19;1!CL:1000415;3.42e-10;2!CL:0002178;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.56e-19,1;CL:0000164,1.56e-19,1;CL:0000502,1.56e-19,1;CL:0000172,1.56e-19,1;CL:0000173,1.56e-19,1;CL:0002351,1.56e-19,1;CL:1000415,3.27e-10,2;CL:0002178,1.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;1.56e-19;1!UBERON:0008425;2.97e-19;1 | |||
|ontology_enrichment_disease=DOID:305!1.92e-25!106;DOID:0050687!2.65e-18!143;DOID:5093!1.13e-15!4;DOID:1612!1.13e-15!4;DOID:299!2.21e-13!25;DOID:7!1.44e-10!39;DOID:162!1.65e-10!235;DOID:14566!4.02e-10!239;DOID:3493!6.08e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.23e-37;2!DOID:4430;1.56e-19;1!DOID:0050619;2.97e-19;1!DOID:1357;2.97e-19;1!DOID:5093;6.77e-19;4!DOID:1612;6.77e-19;4!DOID:299;6.03e-12;25!DOID:4074;2.60e-10;2!DOID:4905;2.60e-10;2!DOID:3498;2.60e-10;2!DOID:305;2.46e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.83e-37,2;DOID:4430,1.56e-19,1;DOID:0050619,3.91e-19,1;DOID:1357,3.91e-19,1;DOID:5093,6.18e-19,4;DOID:1612,6.18e-19,4;DOID:305,3.13e-13,106;DOID:0050687,5.33e-12,143;DOID:299,6.21e-12,25;DOID:4074,2.49e-10,2;DOID:4905,2.49e-10,2;DOID:3498,2.49e-10,2;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002394!6.01e-09!4;UBERON:0003928!6.01e-09!4;UBERON:0004921!8.05e-09!129;UBERON:0004185!8.05e-09!129;UBERON:0002294!8.94e-09!7;UBERON:0001173!8.94e-09!7;UBERON:0004912!8.94e-09!7;UBERON:0001007!3.78e-08!155;UBERON:0001555!3.78e-08!155;UBERON:0007026!3.78e-08!155;UBERON:0004119!8.39e-08!169;UBERON:0000925!8.39e-08!169;UBERON:0006595!8.39e-08!169;UBERON:0005911!2.22e-07!82;UBERON:0003929!7.81e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.97e-19;1!UBERON:0001825;2.97e-19;1!UBERON:0000310;3.90e-08;10!UBERON:0001443;1.78e-07;11!UBERON:0002110;3.25e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.91e-19,1;UBERON:0001825,3.91e-19,1;UBERON:0000310,3.76e-08,10;UBERON:0001443,1.73e-07,11;UBERON:0002110,3.16e-07,3;UBERON:0006242,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91844864163565,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0.179736702294654,0.895105873378046,0,0,0,0,0,0,0,0.260427761085233,2.97363999987065,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,2.93496928398135,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.864542502924636,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0.121792598380896,0,0,0,0,0,2.19875734750328,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0.118193840883968,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2076242959853,1.34109717480496,0,0,0,0,0,0,0,3.61427462524672,0,0.150962843566674,0.0771741581079447,0.218559560503957,7.99539403814589,0,4.24217784782927,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:128722834..128722850,- | |||
}} |
Revision as of 21:15, 21 January 2014
Short description: | p@chr3:128722834..128722850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:128722834..128722850, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.56e-19 | 1 |
enteroendocrine cell | 1.56e-19 | 1 |
type D enteroendocrine cell | 1.56e-19 | 1 |
somatostatin secreting cell | 1.56e-19 | 1 |
pancreatic D cell | 1.56e-19 | 1 |
progenitor cell of endocrine pancreas | 1.56e-19 | 1 |
epithelial cell of gall bladder | 3.27e-10 | 2 |
epithelial cell of stomach | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.91e-19 | 1 |
paranasal sinus | 3.91e-19 | 1 |
breast | 3.76e-08 | 10 |
chest | 1.73e-07 | 11 |
gallbladder | 3.16e-07 | 3 |
gall bladder primordium | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.83e-37 | 2 |
somatostatinoma | 1.56e-19 | 1 |
paranasal sinus cancer | 3.91e-19 | 1 |
maxillary sinus cancer | 3.91e-19 | 1 |
thoracic cancer | 6.18e-19 | 4 |
breast cancer | 6.18e-19 | 4 |
carcinoma | 3.13e-13 | 106 |
cell type cancer | 5.33e-12 | 143 |
adenocarcinoma | 6.21e-12 | 25 |
pancreas adenocarcinoma | 2.49e-10 | 2 |
pancreatic carcinoma | 2.49e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.49e-10 | 2 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |