FFCP PHASE1:Hg19::chr3:186353756..186353761,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=26998 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3658 | |||
|TSSclassifier=weak | |||
|UniProt=C9JC68,Q9UGM5,B7Z8T3 | |||
|association_with_transcript=0bp_to_ENST00000431018,ENST00000450521,ENST00000539949,uc010hyq.2,uc011brz.1_5end | |||
|description=CAGE_peak_3_at_FETUB_5end | |||
|id=chr3:186353756..186353761,+ | |||
|ontology_enrichment_celltype=CL:0000622!2.34e-11!5;CL:0000154!1.53e-09!6;CL:0002623!4.67e-09!3;CL:0000223!5.80e-08!59;CL:0002076!2.42e-07!43;CL:0002368!4.22e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.12e-23;3!CL:0000622;2.75e-14;5!CL:0000154;4.55e-12;6!CL:0000150;2.37e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.15e-23,3;CL:0000622,3.15e-14,5;CL:0000154,5.08e-12,6;CL:0000150,2.55e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;5.72e-18;1!UBERON:0004874;1.22e-17;1!UBERON:0008814;1.03e-09;2!UBERON:0010056;1.03e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!1.26e-09!10;UBERON:0009145!1.26e-09!10;UBERON:0003408!1.47e-09!10;UBERON:0006562!9.28e-09!11;UBERON:0001004!1.06e-07!72;UBERON:0002372!1.55e-07!1;UBERON:0001961!1.55e-07!1;UBERON:0001744!1.55e-07!1;UBERON:0001735!1.55e-07!1;UBERON:0001041!1.66e-07!98;UBERON:0000989!2.23e-07!1;UBERON:0008811!2.23e-07!1;UBERON:0006258!2.23e-07!1;UBERON:0005876!2.23e-07!1;UBERON:0004874!2.23e-07!1;UBERON:0000065!2.47e-07!53;UBERON:0004119!3.19e-07!169;UBERON:0000925!3.19e-07!169;UBERON:0006595!3.19e-07!169;UBERON:0001043!7.53e-07!4;UBERON:0009143!7.53e-07!4;UBERON:0006834!9.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.16e-18;1!UBERON:0001961;3.16e-18;1!UBERON:0001744;3.16e-18;1!UBERON:0001042;3.16e-18;1!UBERON:0001735;3.16e-18;1!UBERON:0000989;1.22e-17;1!UBERON:0008811;1.22e-17;1!UBERON:0001044;4.55e-12;6!UBERON:0003293;4.55e-12;6!UBERON:0003294;4.55e-12;6!UBERON:0010047;4.55e-12;6!UBERON:0003408;4.55e-12;6!UBERON:0000167;4.55e-12;6!UBERON:0001041;2.49e-11;14!UBERON:0000165;6.99e-10;28!UBERON:0006562;8.69e-10;2!UBERON:0000341;9.46e-10;2!UBERON:0000161;1.53e-08;19!UBERON:0000166;1.53e-08;19!UBERON:0004921;2.91e-07;33!UBERON:0001723;6.88e-07;3!UBERON:0001033;6.88e-07;3!UBERON:0001043;7.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,3.16e-18,1;UBERON:0001961,3.16e-18,1;UBERON:0001744,3.16e-18,1;UBERON:0001735,3.16e-18,1;UBERON:0000989,8.72e-18,1;UBERON:0008811,8.72e-18,1;UBERON:0006258,8.72e-18,1;UBERON:0005876,8.72e-18,1;UBERON:0004874,8.72e-18,1;UBERON:0000166,1.81e-12,22;UBERON:0001044,5.08e-12,6;UBERON:0003293,5.08e-12,6;UBERON:0003294,5.08e-12,6;UBERON:0010047,5.08e-12,6;UBERON:0000167,5.08e-12,6;UBERON:0000341,9.46e-10,2;UBERON:0000165,1.57e-09,29;UBERON:0000930,1.57e-09,29;UBERON:0000161,9.97e-08,36;UBERON:0001042,1.13e-07,10;UBERON:0009145,1.13e-07,10;UBERON:0003408,1.42e-07,10;UBERON:0006562,4.71e-07,11;UBERON:0001723,6.88e-07,3;UBERON:0001033,6.88e-07,3;UBERON:0010056,6.88e-07,3;UBERON:0001043,7.70e-07,3;UBERON:0009143,7.70e-07,3;UBERON:0000153,9.06e-07,62;UBERON:0007811,9.06e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,2.19500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.847294206991012,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,3.20674611840788,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10364852762942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0243108625637,21.4290495162368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4999107692667,0,0.387533459016037,0.186224142887574,0,0,0,4.13661821004227,0,17.7809419958511,0.932388670104793,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p3@FETUB | |||
}} |
Revision as of 23:06, 21 January 2014
Short description: | p3@FETUB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FETUB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000431018, ENST00000450521, ENST00000539949, uc010hyq.2, uc011brz.1_5end |
EntrezGene: | FETUB |
HGNC: | 3658 |
UniProt: | C9JC68Q9UGM5B7Z8T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.15e-23 | 3 |
acinar cell | 3.15e-14 | 5 |
protein secreting cell | 5.08e-12 | 6 |
glandular epithelial cell | 2.55e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
tonsil | 3.16e-18 | 1 |
mucosa-associated lymphoid tissue | 3.16e-18 | 1 |
lymphoid tissue | 3.16e-18 | 1 |
tonsillar ring | 3.16e-18 | 1 |
penis | 8.72e-18 | 1 |
intromittent organ | 8.72e-18 | 1 |
lateral plate mesenchyme | 8.72e-18 | 1 |
undifferentiated genital tubercle | 8.72e-18 | 1 |
somatopleure | 8.72e-18 | 1 |
oral opening | 1.81e-12 | 22 |
saliva-secreting gland | 5.08e-12 | 6 |
gland of oral region | 5.08e-12 | 6 |
gland of foregut | 5.08e-12 | 6 |
oral gland | 5.08e-12 | 6 |
oral cavity | 5.08e-12 | 6 |
throat | 9.46e-10 | 2 |
mouth | 1.57e-09 | 29 |
stomodeum | 1.57e-09 | 29 |
orifice | 9.97e-08 | 36 |
chordate pharynx | 1.13e-07 | 10 |
pharyngeal region of foregut | 1.13e-07 | 10 |
gland of gut | 1.42e-07 | 10 |
pharynx | 4.71e-07 | 11 |
tongue | 6.88e-07 | 3 |
gustatory system | 6.88e-07 | 3 |
future tongue | 6.88e-07 | 3 |
esophagus | 7.70e-07 | 3 |
esophageal region | 7.70e-07 | 3 |
anterior region of body | 9.06e-07 | 62 |
craniocervical region | 9.06e-07 | 62 |