FFCP PHASE1:Hg19::chr4:22694616..22694627,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57733 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19069 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H227,A8K9N1 | |||
|association_with_transcript=68bp_to_ENST00000503442,NM_001128432,NM_020973,uc003gqp.3,uc010iep.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_GBA3_5end | |||
|id=chr4:22694616..22694627,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.32e-12!12;CL:0000417!5.32e-12!12;CL:0000668!5.32e-12!12;CL:0000414!5.32e-12!12;CL:0000412!5.32e-12!12;CL:0000182!5.32e-12!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.28e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.05e-11,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!3.04e-12!25;UBERON:0000015!3.04e-12!25;UBERON:0002423!3.04e-12!25;UBERON:0006235!3.04e-12!25;UBERON:0004161!3.04e-12!25;UBERON:0005172!1.52e-11!55;UBERON:0005173!1.52e-11!55;UBERON:0002107!1.58e-11!19;UBERON:0006925!1.58e-11!19;UBERON:0008836!1.58e-11!19;UBERON:0000160!7.62e-11!27;UBERON:0002417!2.77e-10!61;UBERON:0000916!2.77e-10!61;UBERON:0008835!6.20e-10!22;UBERON:0003894!6.20e-10!22;UBERON:0001301!8.24e-10!1;UBERON:0002336!1.17e-09!1;UBERON:0001018!1.17e-09!1;UBERON:0002473!1.17e-09!1;UBERON:0005340!1.17e-09!1;UBERON:0002316!1.17e-09!1;UBERON:0003544!1.17e-09!1;UBERON:0001020!1.17e-09!1;UBERON:0005970!1.17e-09!1;UBERON:0002437!1.17e-09!1;UBERON:0009854!1.71e-09!23;UBERON:0007499!1.01e-08!25;UBERON:0005057!2.23e-08!26;UBERON:0009856!2.23e-08!26;UBERON:0005409!2.50e-08!35;UBERON:0003929!3.29e-07!54;UBERON:0002365!5.40e-07!31;UBERON:0002330!5.40e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.29e-26;4!UBERON:0000160;1.21e-19;17!UBERON:0005409;2.18e-15;22!UBERON:0002107;2.31e-12;19!UBERON:0006925;2.31e-12;19!UBERON:0002423;1.85e-09;25!UBERON:0004921;2.01e-09;33!UBERON:0002365;6.42e-08;31!UBERON:0002330;6.42e-08;31!UBERON:0001007;9.76e-08;81!UBERON:0001155;3.29e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.55e-26,4;UBERON:0000160,1.39e-19,17;UBERON:0005409,1.41e-13,25;UBERON:0002107,2.12e-12,19;UBERON:0006925,2.12e-12,19;UBERON:0008836,2.12e-12,19;UBERON:0008835,9.53e-11,22;UBERON:0003894,9.53e-11,22;UBERON:0009854,2.72e-10,23;UBERON:0007499,1.73e-09,25;UBERON:0009497,1.73e-09,25;UBERON:0000015,1.73e-09,25;UBERON:0002423,1.73e-09,25;UBERON:0006235,1.73e-09,25;UBERON:0004161,1.73e-09,25;UBERON:0009856,3.93e-09,26;UBERON:0004921,8.69e-09,118;UBERON:0002365,1.08e-07,31;UBERON:0002330,1.08e-07,31;UBERON:0001155,3.34e-07,9;UBERON:0001007,5.55e-07,145;UBERON:0001555,5.55e-07,145;UBERON:0007026,5.55e-07,145;UBERON:0002368,7.77e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.3510069643662,1.96565443335525,8.86184860022106,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6132241997154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4499618862225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33442066066362,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,1.26089131678717,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72067986619775,2.62271472604749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@GBA3 | |||
}} |
Revision as of 00:28, 22 January 2014
Short description: | p5@GBA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GBA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 68bp_to_ENST00000503442, NM_001128432, NM_020973, uc003gqp.3, uc010iep.2_5end |
EntrezGene: | GBA3 |
HGNC: | 19069 |
UniProt: | Q9H227A8K9N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.05e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 5.55e-26 | 4 |
intestine | 1.39e-19 | 17 |
gastrointestinal system | 1.41e-13 | 25 |
liver | 2.12e-12 | 19 |
digestive gland | 2.12e-12 | 19 |
liver bud | 2.12e-12 | 19 |
hepatic diverticulum | 9.53e-11 | 22 |
liver primordium | 9.53e-11 | 22 |
digestive tract diverticulum | 2.72e-10 | 23 |
epithelial sac | 1.73e-09 | 25 |
epithelium of foregut-midgut junction | 1.73e-09 | 25 |
anatomical boundary | 1.73e-09 | 25 |
hepatobiliary system | 1.73e-09 | 25 |
foregut-midgut junction | 1.73e-09 | 25 |
septum transversum | 1.73e-09 | 25 |
sac | 3.93e-09 | 26 |
subdivision of digestive tract | 8.69e-09 | 118 |
exocrine gland | 1.08e-07 | 31 |
exocrine system | 1.08e-07 | 31 |
colon | 3.34e-07 | 9 |
digestive system | 5.55e-07 | 145 |
digestive tract | 5.55e-07 | 145 |
primitive gut | 5.55e-07 | 145 |
endocrine gland | 7.77e-07 | 35 |