FFCP PHASE1:Hg19::chr4:83668249..83668254,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:83668249..83668254,- | |||
|id=chr4:83668249..83668254,- | |||
|ontology_enrichment_celltype=CL:0002322!2.33e-10!5;CL:0000066!2.17e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.29e-15;12!CL:0000313;1.25e-12;1!CL:0000159;6.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.68e-15,12;CL:0000313,8.85e-13,1;CL:0000159,5.11e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.45e-16;11!UBERON:0009497;4.65e-14;13!UBERON:0003104;5.72e-09;31!UBERON:0008814;9.53e-07;2!UBERON:0010056;9.53e-07;2 | |||
|ontology_enrichment_disease=DOID:162!4.39e-19!235;DOID:0050687!1.34e-18!143;DOID:14566!2.37e-18!239;DOID:305!5.30e-18!106;DOID:1749!2.88e-11!14;DOID:7!9.51e-11!39;DOID:299!3.49e-08!25;DOID:0050686!1.14e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.25e-12;1!DOID:7;2.19e-09;39!DOID:1749;1.06e-07;14!DOID:3493;6.07e-07;2!DOID:1909;9.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.85e-13,1;DOID:0050687,2.54e-11,143;DOID:305,3.19e-11,106;DOID:7,5.95e-10,39;DOID:162,1.64e-08,235;DOID:14566,2.74e-08,239;DOID:1749,9.03e-08,14;DOID:3493,6.42e-07,2;DOID:1909,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.63e-09!55;UBERON:0005173!1.63e-09!55;UBERON:0002113!7.07e-09!27;UBERON:0003918!7.07e-09!27;UBERON:0005095!7.07e-09!27;UBERON:0007687!7.07e-09!27;UBERON:0002417!4.12e-08!61;UBERON:0000916!4.12e-08!61;UBERON:0000489!4.53e-07!32;UBERON:0003729!5.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.25e-12;1!UBERON:0007195;3.08e-12;1!UBERON:0002107;1.09e-09;19!UBERON:0006925;1.09e-09;19!UBERON:0002423;2.10e-07;25!UBERON:0005172;5.98e-07;52!UBERON:0005173;5.98e-07;52!UBERON:0004909;6.07e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,8.85e-13,1;UBERON:0007195,4.81e-12,1;UBERON:0002107,1.16e-09,19;UBERON:0006925,1.16e-09,19;UBERON:0008836,1.16e-09,19;UBERON:0005172,1.84e-09,54;UBERON:0005173,1.84e-09,54;UBERON:0002417,1.89e-08,60;UBERON:0000916,1.89e-08,60;UBERON:0008835,2.28e-08,22;UBERON:0003894,2.28e-08,22;UBERON:0009854,5.19e-08,23;UBERON:0007499,2.21e-07,25;UBERON:0009497,2.21e-07,25;UBERON:0000015,2.21e-07,25;UBERON:0002423,2.21e-07,25;UBERON:0006235,2.21e-07,25;UBERON:0004161,2.21e-07,25;UBERON:0009856,4.19e-07,26;UBERON:0004909,5.11e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0.116193942869518,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.53735113621709,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,1.56869953835371,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0.962479855263359,0.245040215981032,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0.568967241427498,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0.588187602953219,0,2.46679852541441,1.27149263184303,0.210998064528027,0.489698424477443,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,1.13843818411917,0,0,0,0.261177619741208,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,3.62402638613229,2.47247575143499,2.42652757875066,0,0.169346664131569,0,0,0.482259445395058,0.137539436597234,0,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0.492555124496034,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,1.36484205787483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0,1.61735932610474,0,0,0,0,0,0,0.785720083444267,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,2.59113109462346,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,2.68453036314702,0.098150233615243,2.43835849964539,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0.178553938605658,5.64631794745107,0,0,0,0,0,0,0,0,0,0,0,0.756998549010474,0.98339014767326,0.506794004045748,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr4:83668249..83668254,- | |||
}} |
Revision as of 01:58, 22 January 2014
Short description: | p@chr4:83668249..83668254, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:83668249..83668254, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.68e-15 | 12 |
serous secreting cell | 8.85e-13 | 1 |
seromucus secreting cell | 5.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 8.85e-13 | 1 |
stroma of bone marrow | 4.81e-12 | 1 |
liver | 1.16e-09 | 19 |
digestive gland | 1.16e-09 | 19 |
liver bud | 1.16e-09 | 19 |
abdomen element | 1.84e-09 | 54 |
abdominal segment element | 1.84e-09 | 54 |
abdominal segment of trunk | 1.89e-08 | 60 |
abdomen | 1.89e-08 | 60 |
hepatic diverticulum | 2.28e-08 | 22 |
liver primordium | 2.28e-08 | 22 |
digestive tract diverticulum | 5.19e-08 | 23 |
epithelial sac | 2.21e-07 | 25 |
epithelium of foregut-midgut junction | 2.21e-07 | 25 |
anatomical boundary | 2.21e-07 | 25 |
hepatobiliary system | 2.21e-07 | 25 |
foregut-midgut junction | 2.21e-07 | 25 |
septum transversum | 2.21e-07 | 25 |
sac | 4.19e-07 | 26 |
epithelium of gonad | 5.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.85e-13 | 1 |
cell type cancer | 2.54e-11 | 143 |
carcinoma | 3.19e-11 | 106 |
disease of anatomical entity | 5.95e-10 | 39 |
cancer | 1.64e-08 | 235 |
disease of cellular proliferation | 2.74e-08 | 239 |
squamous cell carcinoma | 9.03e-08 | 14 |
signet ring cell adenocarcinoma | 6.42e-07 | 2 |
melanoma | 9.54e-07 | 2 |