FFCP PHASE1:Hg19::chr5:16180906..16180918,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441061 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33609 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENST00000505509_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_3_at_MARCH11_5end | |||
|id=chr5:16180906..16180918,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.05e-32;5!CL:0002321;1.15e-11;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.21e-40;1!UBERON:0004872;6.04e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.82e-27;6!DOID:171;5.90e-17;10!DOID:3095;2.82e-08;22!DOID:2994;2.82e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.82e-27,6;DOID:171,5.90e-17,10;DOID:3095,2.82e-08,22;DOID:2994,2.82e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.26e-40!57;UBERON:0005068!5.26e-40!57;UBERON:0006241!5.26e-40!57;UBERON:0007135!5.26e-40!57;UBERON:0002616!1.53e-38!59;UBERON:0001893!5.98e-38!34;UBERON:0002020!6.67e-38!34;UBERON:0003528!6.67e-38!34;UBERON:0002780!1.02e-35!41;UBERON:0001890!1.02e-35!41;UBERON:0006240!1.02e-35!41;UBERON:0001869!3.39e-35!32;UBERON:0003080!8.19e-35!42;UBERON:0002791!5.88e-34!33;UBERON:0007023!6.30e-33!115;UBERON:0000955!5.87e-32!69;UBERON:0006238!5.87e-32!69;UBERON:0000073!1.41e-30!94;UBERON:0001016!1.41e-30!94;UBERON:0003075!3.59e-28!86;UBERON:0007284!3.59e-28!86;UBERON:0005743!8.37e-28!86;UBERON:0002346!9.46e-27!90;UBERON:0001017!2.13e-26!82;UBERON:0003056!2.52e-26!61;UBERON:0002308!2.25e-24!9;UBERON:0000125!2.25e-24!9;UBERON:0001950!1.27e-23!20;UBERON:0000033!1.34e-22!123;UBERON:0002619!1.91e-21!22;UBERON:0000153!2.33e-21!129;UBERON:0007811!2.33e-21!129;UBERON:0002771!1.64e-20!3;UBERON:0000956!8.30e-19!25;UBERON:0000203!8.30e-19!25;UBERON:0000200!9.03e-18!6;UBERON:0004121!5.85e-17!169;UBERON:0000924!1.81e-16!173;UBERON:0006601!1.81e-16!173;UBERON:0000369!1.46e-14!4;UBERON:0002435!1.46e-14!4;UBERON:0000204!1.46e-14!4;UBERON:0010082!1.46e-14!4;UBERON:0009663!1.87e-14!7;UBERON:0002148!1.99e-13!2;UBERON:0009662!1.99e-13!2;UBERON:0001871!2.73e-13!7;UBERON:0000025!1.33e-11!194;UBERON:0002420!2.76e-11!9;UBERON:0007245!2.76e-11!9;UBERON:0010009!2.76e-11!9;UBERON:0010011!2.76e-11!9;UBERON:0000454!2.76e-11!9;UBERON:0004111!1.15e-10!241;UBERON:0005383!2.62e-09!3;UBERON:0005382!2.62e-09!3;UBERON:0000988!2.97e-09!3;UBERON:0006331!2.97e-09!3;UBERON:0000477!3.16e-09!286;UBERON:0004733!1.05e-08!12;UBERON:0002028!1.05e-08!12;UBERON:0007277!1.05e-08!12;UBERON:0001736!4.35e-08!1;UBERON:0006298!4.35e-08!1;UBERON:0004732!4.80e-08!13;UBERON:0002022!7.45e-08!1;UBERON:0007190!9.10e-08!1;UBERON:0003112!1.04e-07!1;UBERON:0000032!1.04e-07!1;UBERON:0005253!1.04e-07!1;UBERON:0003128!1.04e-07!1;UBERON:0002241!1.04e-07!1;UBERON:0001703!1.04e-07!1;UBERON:0004761!1.04e-07!1;UBERON:0009617!1.04e-07!1;UBERON:0001874!1.11e-07!1;UBERON:0002298!1.14e-07!8;UBERON:0000064!1.21e-07!219;UBERON:0002336!1.87e-07!1;UBERON:0001018!1.87e-07!1;UBERON:0002473!1.87e-07!1;UBERON:0005340!1.87e-07!1;UBERON:0002316!1.87e-07!1;UBERON:0003544!1.87e-07!1;UBERON:0001020!1.87e-07!1;UBERON:0005970!1.87e-07!1;UBERON:0002437!1.87e-07!1;UBERON:0001882!1.99e-07!1;UBERON:0005403!1.99e-07!1;UBERON:0000483!2.88e-07!309;UBERON:0000119!3.75e-07!312;UBERON:0003076!5.51e-07!15;UBERON:0003057!5.51e-07!15;UBERON:0002680!7.11e-07!9;UBERON:0001895!7.11e-07!9;UBERON:0010092!7.11e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.05e-32;5!UBERON:0002410;1.05e-32;5!UBERON:0000010;1.03e-18;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.05e-32,5;UBERON:0002410,1.05e-32,5;UBERON:0000010,1.03e-18,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,1.34366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85998610953876,26.8483780377738,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0.413373593002368,0.253663240775627,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,1.60778478093707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MARCH11 | |||
}} |
Revision as of 04:46, 22 January 2014
Short description: | p3@MARCH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MARCH11_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -35bp_to_ENST00000505509_5end |
EntrezGene: | MARCH11 |
HGNC: | 33609 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.05e-32 | 5 |
autonomic nervous system | 1.05e-32 | 5 |
peripheral nervous system | 1.03e-18 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.82e-27 | 6 |
neuroectodermal tumor | 5.90e-17 | 10 |
germ cell and embryonal cancer | 2.82e-08 | 22 |
germ cell cancer | 2.82e-08 | 22 |