FFCP PHASE1:Hg19::chr5:116790756..116790798,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-160bp_to_ENST00000504107_5end | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_2_at_ENST00000504107_5end | |||
|id=chr5:116790756..116790798,+ | |||
|ontology_enrichment_celltype=CL:0000039!5.57e-13!7;CL:0000586!5.57e-13!7;CL:0000066!5.00e-09!254;CL:0002322!5.16e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.36e-19;7!CL:0000586;5.36e-19;7!CL:0000167;1.68e-09;1!CL:0000164;1.68e-09;1!CL:0000502;1.68e-09;1!CL:0000172;1.68e-09;1!CL:0002553;1.68e-09;1!CL:0000173;1.68e-09;1!CL:0002563;2.68e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.50e-19,7;CL:0000586,5.50e-19,7;CL:0002553,1.25e-09,1;CL:0000167,2.08e-09,1;CL:0000164,2.08e-09,1;CL:0000502,2.08e-09,1;CL:0000172,2.08e-09,1;CL:0000173,2.08e-09,1;CL:0002351,2.08e-09,1;CL:0002563,2.27e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.08e-10;1!UBERON:0006242;6.59e-10;1!CL:0002351;1.68e-09;1 | |||
|ontology_enrichment_disease=DOID:305!3.99e-14!106;DOID:0050687!6.70e-13!143;DOID:299!4.89e-12!25;DOID:5093!1.43e-11!4;DOID:1612!1.43e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.81e-20;4!DOID:1612;2.81e-20;4!DOID:1799;8.90e-10;1!DOID:10165;8.90e-10;1!DOID:1798;8.90e-10;1!DOID:4430;1.68e-09;1!DOID:3095;3.39e-09;22!DOID:2994;3.39e-09;22!DOID:299;1.87e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.81e-20,4;DOID:1612,2.81e-20,4;DOID:0050687,1.61e-10,143;DOID:1799,8.91e-10,1;DOID:10165,8.91e-10,1;DOID:1798,8.91e-10,1;DOID:4430,2.08e-09,1;DOID:305,2.24e-09,106;DOID:3095,3.58e-09,22;DOID:2994,3.58e-09,22;DOID:299,1.72e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.64e-10!27;UBERON:0005631!4.41e-10!14;UBERON:0000158!4.41e-10!14;UBERON:0005409!5.78e-09!35;UBERON:0000305!1.07e-08!7;UBERON:0004119!1.26e-07!169;UBERON:0000925!1.26e-07!169;UBERON:0006595!1.26e-07!169;UBERON:0004871!1.49e-07!8;UBERON:0002108!2.20e-07!14;UBERON:0003101!4.54e-07!22;UBERON:0000079!4.54e-07!22;UBERON:0001007!6.98e-07!155;UBERON:0001555!6.98e-07!155;UBERON:0007026!6.98e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;2.27e-12;3!UBERON:0002294;1.43e-11;7!UBERON:0001173;1.43e-11;7!UBERON:0000160;2.23e-11;17!UBERON:0001242;2.68e-09;4!UBERON:0001262;2.68e-09;4!UBERON:0004786;2.68e-09;4!UBERON:0004808;2.68e-09;4!UBERON:0001277;2.68e-09;4!UBERON:0001052;3.10e-09;4!UBERON:0005409;7.17e-09;22!UBERON:0000310;2.01e-08;10!UBERON:0001443;1.07e-07;11!UBERON:0004907;1.48e-07;5!UBERON:0002108;1.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,2.03e-12,3;UBERON:0006242,2.03e-12,3;UBERON:0000160,1.91e-11,17;UBERON:0001242,2.27e-09,4;UBERON:0001262,2.27e-09,4;UBERON:0004786,2.27e-09,4;UBERON:0004808,2.27e-09,4;UBERON:0001277,2.27e-09,4;UBERON:0001052,2.36e-09,4;UBERON:0002294,3.97e-09,9;UBERON:0001173,3.97e-09,9;UBERON:0004912,3.97e-09,9;UBERON:0000310,2.01e-08,10;UBERON:0005409,7.16e-08,25;UBERON:0001443,1.07e-07,11;UBERON:0004907,1.19e-07,5;UBERON:0002108,1.77e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.69716365721711,1.14027160516907,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0,0,0,0,0,0,0,0,0,0,0,0,0,27.6571539285746,33.4809603217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0.95497793895076,0.890894042497916,1.53580351049616,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,3.22238114416096,0,0,0,0,0,0,0,12.7609602931764,0.962059999958153,0,0,0.508507300585533,1.18193840883968,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,2.07507513949254,0.807818799687949,1.84700532267414,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,1.97894300007517,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0.450970258243478,0,0.664653872707185,0,0,0,0.853828638089378,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,3.32437350649165,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.630445658393585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0,0.781514011233092,2.09525355585138,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,4.7899279887825,0,0,0,0,0,0.444925607568277,0.235479278551542,0,2.5224494698241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0.111855431797792,0.588901401691458,4.63288114932624,0,0,0,0,0,0.795803100645473,0,0,0,0,0.231522474323834,1.31135736302374,0,0,1.17838273550813,0,0,0,0,0,0,0,0.535661815816973,0.705789743431384,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0,0,0,0,0,0.253397002022874,0,1.06886962106224,1.56221329209236,0.250707539292375,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.12729431655633,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000504107 | |||
}} |
Revision as of 07:00, 22 January 2014
Short description: | p2@ENST00000504107 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000504107_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | -160bp_to_ENST00000504107_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.50e-19 | 7 |
germ cell | 5.50e-19 | 7 |
lung fibroblast | 1.25e-09 | 1 |
peptide hormone secreting cell | 2.08e-09 | 1 |
enteroendocrine cell | 2.08e-09 | 1 |
type D enteroendocrine cell | 2.08e-09 | 1 |
somatostatin secreting cell | 2.08e-09 | 1 |
pancreatic D cell | 2.08e-09 | 1 |
progenitor cell of endocrine pancreas | 2.08e-09 | 1 |
intestinal epithelial cell | 2.27e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 2.03e-12 | 3 |
gall bladder primordium | 2.03e-12 | 3 |
intestine | 1.91e-11 | 17 |
intestinal mucosa | 2.27e-09 | 4 |
wall of intestine | 2.27e-09 | 4 |
gastrointestinal system mucosa | 2.27e-09 | 4 |
gastrointestinal system epithelium | 2.27e-09 | 4 |
intestinal epithelium | 2.27e-09 | 4 |
rectum | 2.36e-09 | 4 |
biliary system | 3.97e-09 | 9 |
biliary tree | 3.97e-09 | 9 |
biliary bud | 3.97e-09 | 9 |
breast | 2.01e-08 | 10 |
gastrointestinal system | 7.16e-08 | 25 |
chest | 1.07e-07 | 11 |
lower digestive tract | 1.19e-07 | 5 |
small intestine | 1.77e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.81e-20 | 4 |
breast cancer | 2.81e-20 | 4 |
cell type cancer | 1.61e-10 | 143 |
islet cell tumor | 8.91e-10 | 1 |
endocrine pancreas cancer | 8.91e-10 | 1 |
pancreatic endocrine carcinoma | 8.91e-10 | 1 |
somatostatinoma | 2.08e-09 | 1 |
carcinoma | 2.24e-09 | 106 |
germ cell and embryonal cancer | 3.58e-09 | 22 |
germ cell cancer | 3.58e-09 | 22 |
adenocarcinoma | 1.72e-08 | 25 |