FFCP PHASE1:Hg19::chr5:170241044..170241049,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C393 | |||
|description=CAGE_peak_at_chr5:170241044..170241049,- | |||
|id=chr5:170241044..170241049,- | |||
|ontology_enrichment_celltype=CL:0000349!5.01e-55!3;CL:0002577!5.01e-55!3;CL:0002537!1.21e-15!5;CL:1000415!2.27e-10!2;CL:0000767!2.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;5.96e-34;3!CL:0000349;5.37e-22;19!CL:0002537;4.21e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,5.96e-34,3;CL:0000349,5.37e-22,19;CL:0002537,4.21e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!1.67e-41!4;UBERON:0004340!1.67e-41!4;UBERON:0005631!1.29e-32!14;UBERON:0000158!1.29e-32!14;UBERON:0003124!4.48e-24!7;UBERON:0000995!1.51e-21!21;UBERON:0005795!1.41e-20!22;UBERON:0003975!1.41e-20!22;UBERON:0006834!3.91e-19!1;UBERON:0000478!4.01e-19!24;UBERON:0004175!3.95e-18!25;UBERON:0003134!2.71e-12!37;UBERON:0000474!2.71e-12!37;UBERON:0000305!1.87e-11!7;UBERON:0003100!4.20e-11!41;UBERON:0004871!3.85e-10!8;UBERON:0003133!1.71e-09!48;UBERON:0004923!4.24e-08!57;UBERON:0005156!9.97e-08!59;UBERON:0000990!9.97e-08!59;UBERON:0002110!2.47e-07!3;UBERON:0006242!2.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.14e-26;4!UBERON:0000478;1.03e-17;24!UBERON:0000305;1.65e-15;7!UBERON:0005631;2.73e-11;10!UBERON:0000158;2.73e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.55e-29,14;UBERON:0000158,2.55e-29,14;UBERON:0001987,7.14e-26,4;UBERON:0004340,7.14e-26,4;UBERON:0000478,1.03e-17,24;UBERON:0000305,1.65e-15,7;UBERON:0003124,1.91e-15,7;UBERON:0004871,9.39e-14,8;UBERON:0004923,2.96e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.42411702081597,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr5:170241044..170241049,- | |||
}} |
Revision as of 09:00, 22 January 2014
Short description: | p@chr5:170241044..170241049, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr5:170241044..170241049, - |
Coexpression cluster: | C393_amniotic_Placental_Amniotic_clear_Basophils_pharyngeal_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 5.96e-34 | 3 |
extraembryonic cell | 5.37e-22 | 19 |
amnion mesenchymal stem cell | 4.21e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.55e-29 | 14 |
membranous layer | 2.55e-29 | 14 |
placenta | 7.14e-26 | 4 |
allantois | 7.14e-26 | 4 |
extraembryonic structure | 1.03e-17 | 24 |
amnion | 1.65e-15 | 7 |
chorion | 1.91e-15 | 7 |
somatic layer of lateral plate mesoderm | 9.39e-14 | 8 |
organ component layer | 2.96e-07 | 66 |