FFCP PHASE1:Hg19::chr6:125283157..125283197,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |||
|TSSclassifier=weak | |||
|UniProt=F2Z2M4 | |||
|association_with_transcript=-493bp_to_ENST00000521654_5end | |||
|coexpression_cluster_id=C383 | |||
|description=CAGE_peak_1_at_RNF217_5end | |||
|id=chr6:125283157..125283197,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.34e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.31e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.57e-13!365;UBERON:0000468!5.60e-13!659;UBERON:0000481!1.65e-11!347;UBERON:0000467!1.47e-10!625;UBERON:0000480!2.74e-10!626;UBERON:0000064!3.75e-08!219;UBERON:0002100!3.84e-08!216;UBERON:0005631!4.63e-08!14;UBERON:0000158!4.63e-08!14;UBERON:0000062!9.11e-08!511;UBERON:0000483!1.05e-07!309;UBERON:0000119!1.42e-07!312;UBERON:0003104!1.65e-07!238;UBERON:0009142!1.65e-07!238;UBERON:0004923!3.14e-07!57;UBERON:0000922!5.05e-07!612;UBERON:0002050!5.24e-07!605;UBERON:0005423!5.24e-07!605;UBERON:0000923!6.37e-07!604;UBERON:0005291!6.37e-07!604;UBERON:0006598!6.37e-07!604;UBERON:0002532!6.37e-07!604;UBERON:0004119!7.60e-07!169;UBERON:0000925!7.60e-07!169;UBERON:0006595!7.60e-07!169;UBERON:0000477!7.87e-07!286;UBERON:0000478!8.73e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.59e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.76e-08,14;UBERON:0000158,1.76e-08,14;UBERON:0004923,4.47e-08,66;UBERON:0004119,5.35e-08,160;UBERON:0000925,5.35e-08,160;UBERON:0006595,5.35e-08,160;UBERON:0002100,2.79e-07,199 | |||
|phase1_expression=2.72517568905835,2.5692062866918,4.36958652697511,9.00659685178174,4.46961094427288,6.10636966870258,0,0,1.04474251279935,1.47440361900905,3.48900583986214,7.42700665242586,4.48403862988371,1.11389717664042,1.65698687863958,1.34465029290355,3.01347264011988,1.46062018077475,1.46379839637152,1.47745269692145,2.04000691244253,2.82109249330279,2.86235987131057,6.56997240349844,11.9265507615063,0.534893840235659,0.492603536699674,0.236132343941038,0.393364276848904,0,0.619264493264304,1.83884244895785,2.71085326900425,3.32778609150109,0,0,1.76160263600908,0,0,0.434021741431704,0.895661896959697,0,0.77272670290256,1.16318591023652,1.51150377475524,1.69808842831471,0.232429036905685,0.822335776043652,0,0,1.5369642391746,0.47296445977717,0,0,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0.320929027076094,0,1.31940520074686,1.99463657621632,1.70489900213078,0,1.13477044938228,0,0.251248665256743,1.5644487552606,0.868755378820466,0,0,0,0,0.850417199860174,0.209658645508376,0.673971786878971,0.150176892841506,0.16072558669708,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,1.31692042387539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,3.45228916977532,2.1686349143074,3.00802746381534,3.47631645505977,0,7.78615792484217,4.15953195521899,3.1042115644759,8.4321394265401,2.5540919722054,2.91436230634034,1.85392221392215,0.649094787309367,0.174129737299267,1.06366368415092,0,0,0,1.19257444420023,0,0.347140501607594,1.69592382577203,0.838998872419812,1.37559020970034,1.04497483268405,1.55050055501597,1.77883131343355,1.33888245105868,3.22263453687318,2.28081631715554,5.36936526605973,1.47065232138347,0.81014194788176,1.51809538082936,1.34717623575702,2.25222960966644,1.53316637465883,0.949265659568129,1.28241220751285,0,0,3.48875241714027,2.48485975847659,2.02608818663328,4.237093786023,7.74458876021797,0.709336764396714,5.04609840128076,16.0123493594557,3.7000132262574,1.24484414159907,2.02066008104532,3.92308567472301,1.66493170409425,2.88087962239999,1.87457145467037,0.936480230490962,1.71141546463335,1.49448680551801,1.17434498643765,1.29498355494505,0.842704840213491,0.204154171254893,1.71968044236475,1.03325781175765,5.94001428641027,2.96720315134268,0,1.43723628363248,1.68336113954066,1.37630371859161,1.93944880838928,1.75591048352335,1.83892677479412,2.55404700141215,2.38207584636044,2.87023417102179,4.27114777637135,4.02670612203168,1.80054657650641,1.13357782162283,7.21393512127762,2.97786970130544,3.71307930930786,2.24105111870757,5.80597680761463,2.11714766877288,1.93975268182574,2.4850671476163,1.30977727695932,1.86516651541536,3.67195621010264,5.18217629122586,4.58887352622406,0.487894824518382,0.132529768321485,1.04574548582567,0.725627385107593,1.26160425437814,0.72995471815166,4.69348596989448,3.21620469096443,1.38134921352481,3.25057549622385,0.721879481669586,2.83936320095625,2.19160097101532,2.16909926895134,2.64705534557745,2.17879444092406,2.37270619111097,1.61797569792197,1.96221465125346,1.15424147083917,0,0,2.057870056657,0,1.26755034821831,0.982827216677626,6.49868897349544,0,0,2.05881372358231,4.93876284338815,1.1240175325762,3.21692711717219,2.40729957412177,0.977424915930974,1.03993478527958,4.3299402607582,2.20267769452646,7.27933904262094,2.30986316417718,3.70388410061289,1.90254152234598,0,0,0.246217006087397,0.468008530278475,0.594524649154913,0.93733833986777,5.03946384596579,3.82792762554443,3.58234090811393,3.19697332365358,4.98397482914775,0,0,0,0.576479813667846,0.37872730027914,0.253991577168676,0.381988425558278,0,3.4214489204541,0.308482478109971,0,0.285826432630578,1.00917975910825,0.43596006883328,2.0534720029866,3.49033632546,3.57656445851882,2.535908257668,3.45719551560332,1.04007436911366,1.54324424557285,1.41849132023278,0.799266537048298,6.43400971461664,2.17048642156577,1.64648067356154,0.325736184293735,3.19852753868291,0.791951872933429,0.904318131178758,0,3.59902768255405,1.2162378064119,0,0,1.91699884393266,4.59447743336456,0,0.434343920002738,2.67119219315498,2.14873155887875,0,0.394061520403854,0,0.128343036279748,1.52456774533478,2.60279707715243,0.773288812777695,1.34013012267479,3.18969375826582,0,0,0.414415513436035,2.20844685094452,2.50085260529839,1.62759014219841,5.40724239980099,2.85486382075459,3.94256037584837,6.09135357962109,2.10662269809403,6.82222512167955,3.10419213877515,3.98535359121262,3.31864503375066,0.868836144680828,0.391602314925481,1.37257369524342,0.413536052245775,0.431428401637234,0.106727557803444,4.85004114314015,6.65741758041988,10.2812699732091,1.73675465473144,5.06424511850606,3.64858122762996,2.56278298511402,4.09365799253363,2.73451665944133,5.93672265779964,0.925258162815933,1.06537035187876,0.821271560138091,0.519254429183621,1.27831416305955,0,6.01519410909855,1.84161977871793,1.83703117063371,1.82091168006717,2.49136388422906,3.15839729035188,2.84956747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| |||
|short_description=p1@RNF217 | |||
}} |
Revision as of 13:43, 22 January 2014
Short description: | p1@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF217_5end |
Coexpression cluster: | C383_oral_liposarcoma_small_Small_skeletal_amniotic_Astrocyte |
Association with transcript: | -493bp_to_ENST00000521654_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | F2Z2M4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.31e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.76e-08 | 14 |
membranous layer | 1.76e-08 | 14 |
organ component layer | 4.47e-08 | 66 |
endoderm-derived structure | 5.35e-08 | 160 |
endoderm | 5.35e-08 | 160 |
presumptive endoderm | 5.35e-08 | 160 |
trunk | 2.79e-07 | 199 |