FFCP PHASE1:Hg19::chr6:150219232..150219254,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=135250 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16793 | |||
|TSSclassifier=strong | |||
|UniProt=E9PKJ6 | |||
|association_with_transcript=0bp_to_ENST00000531073_5end | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_2_at_RAET1E_5end | |||
|id=chr6:150219232..150219254,- | |||
|ontology_enrichment_celltype=CL:0002076!8.72e-13!43;CL:0002368!6.85e-12!13;CL:0000066!4.27e-09!254;CL:0000223!2.53e-08!59;CL:0002202!2.27e-07!9;CL:0002632!2.27e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.89e-13;3!CL:0002202;1.01e-11;9!CL:0002632;1.01e-11;9!CL:0002368;1.83e-11;13!CL:0000244;7.95e-11;4!CL:0000731;7.95e-11;4!CL:0000575;1.39e-10;2!CL:0000622;4.78e-09;5!CL:0002076;5.92e-09;42!CL:0002159;5.66e-08;14!CL:0000154;1.33e-07;6!CL:0002251;1.52e-07;20!CL:0002623;2.72e-07;3!CL:0002621;9.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.85e-13,3;CL:0000069,1.85e-13,3;CL:0000307,1.85e-13,3;CL:0000377,1.85e-13,3;CL:0002076,1.12e-12,42;CL:0002202,8.86e-12,9;CL:0002632,8.86e-12,9;CL:0002368,1.63e-11,13;CL:0000244,6.72e-11,4;CL:0000731,6.72e-11,4;CL:0000575,1.46e-10,2;CL:0000622,4.99e-09,5;CL:0000223,1.62e-08,58;CL:0002159,6.25e-08,14;CL:0000154,1.37e-07,6;CL:0002251,1.38e-07,20;CL:0002623,2.72e-07,3;CL:0002621,7.17e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.89e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.23e-21!72;UBERON:0000065!5.92e-18!53;UBERON:0000072!1.37e-14!46;UBERON:0008947!9.52e-13!38;UBERON:0003258!9.52e-13!38;UBERON:0001557!2.52e-11!19;UBERON:0003102!3.13e-11!95;UBERON:0001737!8.08e-11!9;UBERON:0004119!3.42e-10!169;UBERON:0000925!3.42e-10!169;UBERON:0006595!3.42e-10!169;UBERON:0001041!1.31e-09!98;UBERON:0000166!5.20e-08!21;UBERON:0001007!9.87e-08!155;UBERON:0001555!9.87e-08!155;UBERON:0007026!9.87e-08!155;UBERON:0002199!1.20e-07!45;UBERON:0002416!1.20e-07!45;UBERON:0004921!2.34e-07!129;UBERON:0004185!2.34e-07!129;UBERON:0002097!3.23e-07!40;UBERON:0007196!4.24e-07!14;UBERON:0001558!4.24e-07!14;UBERON:0000077!9.09e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;3.21e-10;7!UBERON:0001005;3.21e-10;7!UBERON:0007196;6.73e-10;15!UBERON:0001558;6.73e-10;15!UBERON:0000165;2.41e-09;28!UBERON:0000486;3.85e-09;12!UBERON:0000365;9.49e-09;5!UBERON:0000161;4.15e-08;19!UBERON:0000166;4.15e-08;19!UBERON:0001723;2.12e-07;3!UBERON:0001033;2.12e-07;3!UBERON:0005910;2.33e-07;6!UBERON:0001043;3.12e-07;3!UBERON:0001949;9.07e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,2.72e-12,22;UBERON:0001004,2.28e-10,74;UBERON:0003126,3.09e-10,7;UBERON:0001005,3.09e-10,7;UBERON:0007196,6.05e-10,15;UBERON:0001558,6.05e-10,15;UBERON:0000165,5.22e-09,29;UBERON:0000930,5.22e-09,29;UBERON:0000365,8.32e-09,5;UBERON:0003102,3.96e-08,99;UBERON:0001444,1.27e-07,49;UBERON:0005910,2.09e-07,6;UBERON:0001723,2.19e-07,3;UBERON:0001033,2.19e-07,3;UBERON:0010056,2.19e-07,3;UBERON:0001043,3.08e-07,3;UBERON:0009143,3.08e-07,3;UBERON:0005178,3.80e-07,34;UBERON:0002224,3.80e-07,34;UBERON:0000161,5.21e-07,36;UBERON:0000153,6.20e-07,62;UBERON:0007811,6.20e-07,62;UBERON:0005181,6.58e-07,35;UBERON:0001949,7.17e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,1.00267582127178,0.144846518960824,0,0,0,0,0,0.196468613246569,4.00724817121796,9.64039551239516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0.496971951695318,0.12663051166458,0,0.573673241497627,0,0,0,0,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.18611685633159,1.0126579934476,0.292311015483596,0,0.0920498986422993,0,0.355009592516614,0.403008392910561,0,2.31913023795956,1.90922284413584,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.354920400119532,0.168584690078102,0.723033089650446,0.330881918197182,0.217879444092406,0.237270619111097,0.674156540800822,0.98110732562673,0.769494313892781,0,0,0,0,0,0,0,0,0,0,2.08525542276389,1.1240175325762,0.703702806881416,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0.355123450626254,0.410635780069046,0.519254429183621,0.348631135379878,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25030123018261,0,0,0,0,0,0,0,0,0,3.47098322258054,0.576570202095319,0.382838137483752,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,1.63577591633371,1.34060455107157,1.08890984861323,0,3.44404298136984,0,5.32116184244011,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,1.00299045849731,0.284136146806413,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0,0,0,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,8.6442721452734,6.84857300683794,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1711333052391,0,0,0,0.483781656445426,0.365446585430928,0.410577285266046,28.4177818311069,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0,3.06402245001834,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,5.41661368190565,0,2.68347750079413,0,0,0.105600336519406,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0.704815022316672,0.213574825135389,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,1.77962244319307,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0,0.358177682162975,3.08801447160972,0.219284049578707,0,0,0.168942440653073,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,3.776746708425,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,1.28400018965175,0,0.381382095467167,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.62164849248911,4.60939888153665,7.60385627995501,0.430227358820278,0,0,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,11.301401040752,0,0.129177819672012,0,0,0,0,13.4984383696116,5.13349951627922,16.6359570946031,4.80538776130932,0.332660356546013,0,0,0,0,0,0.733448665097199,3.66206560484165,0,0.201273793591026,0 | |||
|short_description=p2@RAET1E | |||
}} |
Revision as of 14:34, 22 January 2014
Short description: | p2@RAET1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAET1E_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000531073_5end |
EntrezGene: | RAET1E |
HGNC: | 16793 |
UniProt: | E9PKJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.85e-13 | 3 |
branched duct epithelial cell | 1.85e-13 | 3 |
tracheal epithelial cell | 1.85e-13 | 3 |
tracheoblast | 1.85e-13 | 3 |
endo-epithelial cell | 1.12e-12 | 42 |
epithelial cell of tracheobronchial tree | 8.86e-12 | 9 |
epithelial cell of lower respiratory tract | 8.86e-12 | 9 |
respiratory epithelial cell | 1.63e-11 | 13 |
transitional epithelial cell | 6.72e-11 | 4 |
urothelial cell | 6.72e-11 | 4 |
corneal epithelial cell | 1.46e-10 | 2 |
acinar cell | 4.99e-09 | 5 |
endodermal cell | 1.62e-08 | 58 |
general ecto-epithelial cell | 6.25e-08 | 14 |
protein secreting cell | 1.37e-07 | 6 |
epithelial cell of alimentary canal | 1.38e-07 | 20 |
acinar cell of salivary gland | 2.72e-07 | 3 |
gingival epithelial cell | 7.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
oral opening | 2.72e-12 | 22 |
respiratory system | 2.28e-10 | 74 |
trachea | 3.09e-10 | 7 |
respiratory airway | 3.09e-10 | 7 |
tracheobronchial tree | 6.05e-10 | 15 |
lower respiratory tract | 6.05e-10 | 15 |
mouth | 5.22e-09 | 29 |
stomodeum | 5.22e-09 | 29 |
urothelium | 8.32e-09 | 5 |
surface structure | 3.96e-08 | 99 |
subdivision of head | 1.27e-07 | 49 |
transitional epithelium | 2.09e-07 | 6 |
tongue | 2.19e-07 | 3 |
gustatory system | 2.19e-07 | 3 |
future tongue | 2.19e-07 | 3 |
esophagus | 3.08e-07 | 3 |
esophageal region | 3.08e-07 | 3 |
thoracic cavity element | 3.80e-07 | 34 |
thoracic cavity | 3.80e-07 | 34 |
orifice | 5.21e-07 | 36 |
anterior region of body | 6.20e-07 | 62 |
craniocervical region | 6.20e-07 | 62 |
thoracic segment organ | 6.58e-07 | 35 |
gingival epithelium | 7.17e-07 | 3 |