FFCP PHASE1:Hg19::chr6:150647895..150647900,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10194 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000364758_5end | |||
|coexpression_cluster_id=C313 | |||
|description=CAGE_peak_1_at_RNU4-7P_5end | |||
|id=chr6:150647895..150647900,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.06e-07!57;UBERON:0005068!5.06e-07!57;UBERON:0006241!5.06e-07!57;UBERON:0007135!5.06e-07!57;UBERON:0002020!6.01e-07!34;UBERON:0003528!6.01e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.59e-08,56;UBERON:0005068,7.59e-08,56;UBERON:0006241,7.59e-08,56;UBERON:0007135,7.59e-08,56;UBERON:0000073,1.02e-07,53;UBERON:0002616,1.02e-07,53;UBERON:0003528,1.11e-07,34;UBERON:0002020,1.11e-07,34;UBERON:0002780,4.43e-07,41;UBERON:0001890,4.43e-07,41;UBERON:0003080,4.43e-07,41;UBERON:0006240,4.43e-07,41;UBERON:0002791,4.57e-07,32 | |||
|phase1_expression=0.363356758541113,2.78330681058278,0,0,4.91657203870017,4.36169262050184,111.451946394057,0,3.91778442299758,0,1.39560233594486,0.436882744260345,3.16520373874144,0,2.98257638155124,1.34465029290355,1.20538905604795,1.46062018077475,1.46379839637152,0,3.26401105990805,5.64218498660558,0.286235987131057,5.88560027813402,2.00868223351684,12.0733181081763,13.7107984381409,18.7331659526557,0,0,0,15.6301608161418,5.12050061923025,11.0926203050036,0.232401601740905,0.142169232487422,0,0.553995408531877,33.0898338325734,7.59538047505481,0.447830948479849,0,0,5.37973483484389,2.64513160582167,5.09426528494414,7.67015821788759,4.93401465626191,3.40677007984614,11.2200033005639,11.0149103807513,0.236482229888585,5.17118521104928,7.10033151942209,1.35426486594342,4.51781614902251,1.63743690034707,0.674170453335254,4.89734227793444,0,4.47535988059329,9.56568770541477,3.39088217956774,0.852449501065388,6.09439401120026,3.40431134814684,4.9825779919646,6.53246529667532,5.73631210262222,0,7.26479403160043,0,0.632924774881769,0.845021145247767,1.27562579979026,1.04829322754188,1.01095768031846,0.150176892841506,0,0,1.9891667719909,2.92262646023414,0,0,0,0,0,0,0,0,52.9368061271787,44.0427892028204,94.0392141188063,0,0,1.31692042387539,0,30.2618287316857,7.81285696198135,0.501559486172034,0,0,5.84480185223734,0.111410456885174,4.41908861212256,1.77227115666897,0.270803863765016,4.35510487067296,4.42201781703586,5.09757504271396,8.0141505157896,0.289803085735052,0.444859689486181,1.07016331235885,6.27213142829861,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,20.8603352711136,7.96534221355394,14.6284119788377,7.37770945674,0.12786256184353,0,0,4.05570253090306,0,2.43317435151318,0,6.43015252641436,2.10803485663503,0.0654895377488563,0,1.11235332835329,1.9472843619281,0.348259474598534,3.0580330919339,0.953962497221368,0,0,0,30.9684454238205,0,2.26123176769604,23.4919684277547,2.75118041940067,5.22487416342026,0.775250277507987,0,0,0,0,6.10155143870424,0,6.48113558305408,0,1.79623498100936,0.788280363383256,44.4618248651061,0,3.66403487860815,0,0,0,1.49091585508596,0,0,14.9155042789383,4.61068896857864,11.2135520028461,0,3.7000132262574,0,3.50247747381189,1.63461903113459,0,13.25204626304,0,10.6134426122309,0,3.58676833324323,1.52664848236894,2.10434827678571,0.98315564691574,0,1.22834317311768,1.44656093646072,0,6.18167323196392,0,3.59309070908119,0,3.62843707628696,0,4.82875382968922,2.45190236639216,1.80285670687916,0.680593098960126,10.5839885056429,0,0.211931901159562,13.8041904198825,0.103052529238439,8.75977836155139,0,0,0,4.29137416214995,0,0,16.6854508482809,0,0,0,0,0,1.82960559194393,1.85541675650079,1.51052125730374,1.24393266018445,0.756962552626885,1.45990943630332,35.9833924358577,3.85944562915731,11.0507937081984,1.85747171212792,7.21879481669586,0.473227200159376,0.505754070234305,0,0.330881918197182,0,0,0,1.17732879075208,0,5.90524363699719,2.80483547606892,0,4.41026134156626,15.2106041786197,13.7595810334868,8.86184860022106,7.50487269004906,0,0.171567810298526,0,0,2.71428225511403,0,0,4.15973914111831,4.3299402607582,0,0,0,2.31492756288305,4.56609965363036,56.8947166530678,46.3582527531231,0,0,0.891786973732369,0,0,0,0,0,8.05103626246943,0,0,0,0.288239906833923,0,0,0,0,5.13217338068116,1.64523988325318,0.300343057843917,0.285826432630578,0,1.74384027533312,0,0.258543431515556,0,3.381211010224,0,1.04007436911366,0,2.83698264046557,3.99633268524149,0,0,2.46972101034231,0,0,9.50342247520115,0,0,1.89948683245908,3.64871341923571,1.50677127429638,4.21667878966063,0,2.29723871668228,2.85273810081437,0,2.05476322550383,0,3.36255431980582,0.197030760201927,17.2502059887614,4.36366323351144,0,1.30139853857622,41.7575958899955,0.167516265334349,13.3967137847164,4.49404214368309,44.8742188806037,1.65766205374414,0,6.5022167737758,1.62759014219841,1.03985430765404,0.535286966391485,0.788512075169673,0.819989904948992,0,22.7407504055985,55.8754584979527,0,3.68738337083406,0.0868836144680828,0,5.49029478097369,0.206768026122887,30.6314165162436,10.0323904335238,0.909382714338778,0,4.23346410661552,0,0,4.2099014164961,0,0,2.0911009748669,0,3.23840356985577,1.42049380250502,0,1.55776328755086,5.11325665223821,0,1.40354529212299,1.56537681191024,0,2.00300284807389,1.57349297951309,0,0.15403067420883,0,4.38417673959782,0,7.96133688496276,2.2112181685947,5.18198198645135,3.08454505380579,0,9.53210570324221,0,2.49322802678617,2.0148727924996,0,0.522870902049801,0,0,0,0,1.00726411300178,0.082509499920588,0,7.80072295243825,0,0.193341436584244,1.07834031980251,3.53058451870098,1.92971201478343,0,6.0907011443976,1.61930592090592,0,0.165284915360978,1.72971060628596,0,1.71968227454435,0.464845549297286,14.7961803010401,0,0.308033580176089,0,0,0,5.43874569619567,0,0.316379424718726,3.0500831027812,0,12.8381696410176,0,22.7635105657777,0.359744915166629,2.47083326762449,2.00281083987667,0,1.58510321173008,4.21258456238981,0,2.92456187557541,8.45201174054043,0,2.96951407102797,2.26016233240486,0,5.30751180192976,11.3997230165978,0,1.9676842561399,0,6.50629346009475,7.04239006330604,0,0,0,0,5.48879851773927,5.26871828735843,0,1.39973888097993,0.192444225451024,3.35151137767894,10.8890984861323,0,0,0,3.10401107475673,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0.411362273086194,0,0,0,2.99107399156925,6.73735898684351,3.92064345569651,0,0,0.284567373393656,0,6.58611925728295,0,13.3354357116046,1.62310970137278,13.478264549446,2.05411211129873,4.38703708164465,20.0507581672054,1.18504244461122,4.97823032821469,9.68638594517028,17.0338495076131,12.7096977559633,0.307240764308458,0,0,2.73543333562856,9.74421608633348,1.23087398947712,1.89318974933188,6.99451132795422,0,1.12284324244932,0,1.57768678274367,0.222886768554957,5.39858678932185,0.23874448473769,1.18785872333055,3.99308912729002,6.95903353436409,64.1452538831938,0,4.28490072989575,11.1896466307837,0.996239941255349,11.0513566212459,3.27512572210559,0.102268682502155,0.369254416383208,0,0,0.179021174675609,3.5810065915881,0,93.3984060153065,0,0,0,1.99613798001194,18.2299432759663,0.0874599999961957,18.1249893858698,3.75518379342149,2.79679015322043,4.72775363535873,2.41320361269025,11.0809753085637,9.54937472133108,7.08593108651071,27.495988006593,3.05163472634166,48.3231365899452,1.77328571372128,6.58156191461918,0,0,0,0,1.38338342632836,0,1.95565269459615,1.27600463892768,0.274792780205587,8.52855641629816,7.15353087370155,3.76752615348059,1.16348177330109,8.57263510345287,12.1558771276999,9.23018728367135,0.37950746544837,0,4.64195741961659,0,0.282706142867882,0,1.99052386215701,0,29.329446956814,0,0,0,0,15.248975298677,14.2901311892457,13.3191996127436,0,0,11.8375320854817,15.7287930863263,18.6704384594599,0,0.150323419414493,0,2.65861549082874,4.63388738225698,2.82539626566503,2.38944859545918,0,0,2.77695581336209,0,0.174118413160805,5.94070672022902,0.171986032471617,20.1253169081297,13.2291663925996,22.6638661466857,0,0,23.7279777819559,0.959293472527256,3.7755776223568,0,0,0,2.13452994739353,7.59276516412095,3.02589876023623,0,14.413979820405,0.14405479798815,0,2.35694034616795,0,0,0,0,7.80546375322726,47.9168826121976,0,3.0083580899397,11.0412688797312,7.81990723562312,4.35404805622199,22.2540637618812,3.79390100948083,0.858452096273142,0.223171457441873,0,1.08089965062721,4.65983798109815,11.265995069933,10.9613091646951,9.3690925957317,0,2.7095466261051,7.15706720828373,52.4383113529566,1.60753148465019,1.37539436597234,1.66176135211674,0,19.3450488639487,0,2.68347750079413,0,0,0,5.1993328406525,2.87872795979168,45.0258055615221,29.7941386664444,1.27134268827375,2.17199840701485,2.5926644736038,0.979762080328227,1.19730191562487,3.77625595446959,5.45241669713349,1.24643300672138,0,18.550964447711,4.13705460356962,20.6282858718596,0,0.704815022316672,0,0,20.7119527673598,8.93098839261511,2.56895121467328,0,0,0,0,0,0,0,11.5188863395708,3.17268288745104,50.0763722825999,4.0138643698305,45.81369828472,0,15.0800012080492,0.999843263696853,0,0,9.41063278792687,13.5817122683996,12.6081294891418,2.38807684618998,4.90797950679171,12.2057289530575,1.89403005275089,4.77979013329893,0,3.43260102595385,3.62954217031774,2.64243240990727,2.06997209985487,1.75226443880073,2.24901556081802,3.10525913752519,0,1.86089200190596,2.08698024724694,2.70463696194993,0.380805212168795,3.25496586563729,4.18251916165887,4.618653952827,0.928067519756987,0.398095888698616,11.2007774105683,0.343395705182793,0.673498977531838,0,0,0,3.91491437947817,9.52164887151544,4.39892701215285,4.16052397660995,3.04451029838529,1.54400723580486,5.48210123946768,2.8270263351341,3.47245268887647,2.87202149110224,3.33113974164331,4.14516410077438,5.1656192550155,52.8147226099612,0.194860308839388,0.265729680626726,0,7.53502652346749,4.66968526632067,0.845248493434508,1.9998739585493,0,0,2.27006381426734,1.65695355226657,0.279759015438889,0,0.127894371303652,0.107824811396682,1.72992536041486,7.97230358801702,1.01839517972415,23.1706662910834,14.6244201825623,2.23457967189298,0.954013051960256,0.157723490002507,0,3.52675943690684,7.04364597912361,0,5.6678630530234,45.9745514084596,18.0502400531864,82.4274446645018,0,19.2156018301903,5.71077681036618,0,0,2.20114318226015,1.15525666150338,3.4324388592045,0,0,0,2.42046082444224,5.47059807863165,4.97622719514703,2.78412259767164,0,0,5.46754669029693,43.817600858251,0,16.9562190795648,15.3512174720011,9.92422356778589,5.45200857514824,2.29972369751271,13.9282477328355,0,13.3532432932059,0,0,4.03318956445227,0,0,0,0.118193840883968,0,0.156986185701028,35.1938921411844,0,28.3079203357944,0.215927591218621,0,0,0,1.74362138052188,0,2.40513409419076,6.2164849248911,6.828739083758,4.14755797088455,0,0,0.0852134047591577,5.92741870267301,7.3314197934096,4.03268301363616,0.955538938977433,8.38915738483442,0,0,7.76914604625474,0.102662806856247,73.0683091743065,17.9713067431882,1.87151570769685,10.9422926338753,2.02164154321867,0,4.28768015307174,1.20770274853339,0,11.5836567067097,21.6345956326301,0,1.64973582971138,5.69294554633341,0,9.7210817344182,1.0195626881269,0.0939839179798536,0.0644578879735772,0,0.178553938605658,4.94052820401969,0,15.3370641531769,7.79839781787719,53.4656645154913,0,0,7.41796173578642,12.6966441723696,0.371995018166751,0,0,2.64949492153666,1.31118686356435,3.04076402427449,1.22386595690378,14.4297398843403,4.68663987627709,7.77193371806363,0.0757786982182394,2.67964130156179,7.46252495512901,40.6491673737248,2.98527574661373,16.6645102024618,0.0645889098360061,0.0620747142958579,1.23345048838675,0.0636471582781649,15.1587891718664,14.5870221090964,32.5121636031017,0,0.0717222053926763,35.2619977938774,0,0,0,4.04213409479641,7.03922827210363,0,12.6137815277879,4.66029741929859,10.6675110603244,3.20568492303233 | |||
|short_description=p1@RNU4-7P | |||
}} |
Revision as of 14:34, 22 January 2014
Short description: | p1@RNU4-7P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNU4-7P_5end |
Coexpression cluster: | C313_blood_CD19_Adipocyte_acute_Osteoblast_Cardiac_Neurons |
Association with transcript: | 0bp_to_ENST00000364758_5end |
EntrezGene: | NA |
HGNC: | 10194 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 7.59e-08 | 56 |
neural rod | 7.59e-08 | 56 |
future spinal cord | 7.59e-08 | 56 |
neural keel | 7.59e-08 | 56 |
regional part of nervous system | 1.02e-07 | 53 |
regional part of brain | 1.02e-07 | 53 |
brain grey matter | 1.11e-07 | 34 |
gray matter | 1.11e-07 | 34 |
regional part of forebrain | 4.43e-07 | 41 |
forebrain | 4.43e-07 | 41 |
anterior neural tube | 4.43e-07 | 41 |
future forebrain | 4.43e-07 | 41 |
regional part of telencephalon | 4.57e-07 | 32 |