FFCP PHASE1:Hg19::chr7:27135533..27135546,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3198 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5099 | |||
|TSSclassifier=strong | |||
|UniProt=P49639 | |||
|association_with_transcript=46bp_to_ENST00000343060_5end | |||
|description=CAGE_peak_3_at_HOXA1_5end | |||
|id=chr7:27135533..27135546,- | |||
|ontology_enrichment_celltype=CL:0000076!4.23e-11!62;CL:0002393!4.30e-07!9;CL:0002397!4.30e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000081;2.58e-16;11!CL:0000094;8.82e-15;8!CL:0000775;1.05e-10;3!CL:0000875;2.06e-10;3!CL:0002396;2.06e-10;3!CL:1001319;1.97e-08;1!CL:1000600;1.97e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,1.79e-16,11;CL:0000094,7.82e-15,8;CL:0000775,8.26e-11,3;CL:0000875,1.16e-10,3;CL:0002396,1.16e-10,3;CL:1001319,3.79e-08,1;CL:1000600,3.79e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!1.24e-09!45;UBERON:0006554!5.73e-09!44;UBERON:0003064!3.12e-07!37;UBERON:0002113!3.25e-07!27;UBERON:0003918!3.25e-07!27;UBERON:0005095!3.25e-07!27;UBERON:0007687!3.25e-07!27;UBERON:0000489!5.01e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.97e-08;1!UBERON:0001256;1.97e-08;1!UBERON:0001259;1.97e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,3.79e-08,1;UBERON:0001256,3.79e-08,1;UBERON:0001259,3.79e-08,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328402357799783,0.314843125254717,1.18009283054671,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,1.0246428261164,0.236482229888585,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0.659702600373432,0,0,0,0,0,0.75374599577023,0,0.217188844705117,0,0,0,0.211255286311942,0.425208599930087,0.628975936525128,0.22465726229299,0,0,1.99508920618874,0.39783335439818,1.46131323011707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,1.13061588384802,0.838998872419812,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,0,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0,2.63560834872127,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.368199594569197,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.329250856225877,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0.447792613514241,0,0,0.492663237895943,1.49682337822484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,1.49801404789436,0,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.804269605718038,0,0,0.177561725313127,0.164254312027618,0,0,0,0.802025881213139,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0.422206515571503,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0.764628819135115,0,0.895499018888713,0,0,0,0,0,0,0,0.082509499920588,1.72279661398852,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0,0,0.235624804691373,0,0,0,0.48763373908959,0.974853958525138,0,0,0.282810863907425,0,0,0,0,1.15755106853338,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.568272293612826,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,0,3.26465616318295,0,0,0,0.0884575645033392,0,1.77912677208373,0.617819694732514,0.626531697032732,0,0,0,0.182454789215666,0,0,0,0,0,0,0.751617097072463,0.311064574191741,0,0,0,0,0.569219092059585,0,0.347119476670262,0.293977192243133,0.174118413160805,0,0,0,0,0,0.193978032976839,0.264768380074501,0,0.274083849293502,0,0,0,0,0,0,0,1.94712213482057,5.14784993585894,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0.316801009558219,0,1.15149118391667,0,0,0.25426853765475,0,0,0,1.19730191562487,0.328370082997356,0.170388021785422,6.57210130816729,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,0,0,0.606596470166591,0,0,0,0,0.298509605773748,0,0.554805861502613,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0,0,0,0,0,0.800055529326307,0,0.336749488765919,0,0.192619830407303,0.857766365499703,0,0.226705925512272,1.15761237161917,0.489473409012935,0,0,1.31570429747224,0.353378291891762,0.192914038270915,0,0,0,0.607719912354764,0,0,0,0.163565394255844,0,0.491545817507439,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,1.14986184875636,0,0,0,0,0,0.115233987555779,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0.913158720509496,0.431855182437243,0.47775168788705,0,0,0.348724276104376,0,0.801711364730253,0,0,0,0,0,0.170426809518315,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,3.21084245099435,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0.469919589899268,0.0644578879735772,0,0.1785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| |||
|short_description=p3@HOXA1 | |||
}} |
Revision as of 16:10, 22 January 2014
Short description: | p3@HOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENST00000343060_5end |
EntrezGene: | HOXA1 |
HGNC: | 5099 |
UniProt: | P49639 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 1.79e-16 | 11 |
granulocyte | 7.82e-15 | 8 |
neutrophil | 8.26e-11 | 3 |
non-classical monocyte | 1.16e-10 | 3 |
CD14-low, CD16-positive monocyte | 1.16e-10 | 3 |
bladder cell | 3.79e-08 | 1 |
lower urinary tract cell | 3.79e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 3.79e-08 | 1 |
wall of urinary bladder | 3.79e-08 | 1 |
mucosa of urinary bladder | 3.79e-08 | 1 |