FFCP PHASE1:Hg19::chr7:45954539..45954548,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5472 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=375bp_to_ENST00000460209_5end | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_27_at_IGFBP3_5end | |||
|id=chr7:45954539..45954548,- | |||
|ontology_enrichment_celltype=CL:0000153!2.09e-10!9;CL:0000447!2.09e-10!9;CL:0002620!2.60e-10!23;CL:0002334!2.45e-09!12;CL:0000057!3.11e-09!75;CL:0000667!1.25e-08!6;CL:0000058!1.25e-08!6;CL:0000138!1.25e-08!6;CL:0000055!1.04e-07!180;CL:0000499!3.13e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000153;3.85e-27;9!CL:0000447;3.85e-27;9!CL:0000138;1.75e-26;6!CL:0000327;6.10e-23;15!CL:0000499;3.11e-16;28!CL:0000222;9.96e-11;1!CL:0000151;2.59e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.66e-27,9;CL:0000447,3.66e-27,9;CL:0000058,1.75e-26,6;CL:0000138,1.75e-26,6;CL:0000327,6.85e-23,15;CL:0000499,3.18e-16,28;CL:0000151,2.69e-09,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.67e-09!5;DOID:450!1.67e-09!5;DOID:66!1.67e-09!5;DOID:423!1.67e-09!5;DOID:0080000!1.67e-09!5;DOID:11722!1.67e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;3.40e-11;1!DOID:4235;9.96e-11;1!DOID:3571;9.96e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,3.41e-11,1;DOID:4235,1.21e-10,1;DOID:3571,1.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000478!3.80e-11!24;UBERON:0002199!5.26e-08!45;UBERON:0002416!5.26e-08!45;UBERON:0002097!1.92e-07!40;UBERON:0005631!6.98e-07!14;UBERON:0000158!6.98e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06014813338393,2.50668955317945,8.40109809972778,0.795285947051099,7.29952305453954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,1.06778694409284,0.423863802319124,0.900273288253207,0.618315175430633,0.257640540045629,0.930584281657949,0.506328996723799,0.0974370051611986,0.504867548488229,0.736399189138395,0,1.77504796258307,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0.306923946576125,0.280660094433074,0.128139149255701,1.53512174720011,0.482561763430822,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.55597265731176,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,1.75380354101505,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,2.53329162357197,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.71623345421307,0.593929361665277,0.614321404198464,0,0,0,0,0,0,0,0,0,0,4.66559381492711,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,1.27600463892768,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,1.18608451472249,0.494255755786011,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0,0,0,1.19885765749278,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0.662091970365432,0.5085370753095,0.542999601753713,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0.686791410365586,0,1.26184898228651,0,0,0.260994291965212,0.226705925512272,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0.0752103283492573,0.80682027481408,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0.638812138197976,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0.913158720509496,1.51149313853035,3.8220135030964,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0.0644578879735772,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |||
|short_description=p27@IGFBP3 | |||
}} |
Revision as of 16:55, 22 January 2014
Short description: | p27@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 375bp_to_ENST00000460209_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.66e-27 | 9 |
carbohydrate secreting cell | 3.66e-27 | 9 |
chondroblast | 1.75e-26 | 6 |
chondrocyte | 1.75e-26 | 6 |
extracellular matrix secreting cell | 6.85e-23 | 15 |
stromal cell | 3.18e-16 | 28 |
secretory cell | 2.69e-09 | 36 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 3.41e-11 | 1 |
spindle cell sarcoma | 1.21e-10 | 1 |
liver cancer | 1.46e-10 | 1 |