FFCP PHASE1:Hg19::chr8:23159569..23159589,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C608 | |||
|description=CAGE_peak_at_chr8:23159569..23159589,- | |||
|id=chr8:23159569..23159589,- | |||
|ontology_enrichment_celltype=CL:0000055!2.00e-27!180;CL:0000222!2.14e-20!119;CL:0000057!1.03e-18!75;CL:0000548!2.61e-15!679;CL:0000004!2.61e-15!679;CL:0000255!2.61e-15!679;CL:0000144!3.02e-15!625;CL:0000012!7.99e-15!682;CL:0000183!1.65e-13!59;CL:0002371!4.64e-13!591;CL:0000680!6.98e-13!57;CL:0000056!6.98e-13!57;CL:0000355!6.98e-13!57;CL:0000187!1.13e-12!54;CL:0000393!5.52e-11!60;CL:0000211!5.52e-11!60;CL:0000220!6.76e-11!246;CL:0002321!1.57e-10!248;CL:0000192!2.23e-10!42;CL:0000514!2.23e-10!42;CL:0000003!1.57e-09!722;CL:0002620!4.67e-09!23;CL:0000213!1.37e-08!57;CL:0000215!1.37e-08!57;CL:0002334!4.13e-08!12;CL:0000048!4.69e-08!430;CL:0000359!7.74e-08!32;CL:0000723!1.55e-07!436;CL:0000034!4.96e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.09e-09;12!CL:0000134;5.52e-09;55!CL:0000359;1.21e-08;32!CL:0000048;5.02e-08;58!CL:0002569;1.55e-07;6!CL:0000723;9.65e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.29e-14,76;CL:0000222,2.14e-10,121;CL:0002334,4.42e-10,12;CL:0000192,1.01e-08,43;CL:0000514,1.01e-08,43;CL:0000359,1.12e-08,32;CL:0000048,1.83e-08,427;CL:0000680,3.68e-08,58;CL:0000056,3.68e-08,58;CL:0000355,3.68e-08,58;CL:0000187,4.67e-08,55;CL:0000723,5.08e-08,433;CL:0002569,6.78e-08,6;CL:0000034,1.87e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.30e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.81e-09;14!DOID:17;1.52e-07;5!DOID:450;1.52e-07;5!DOID:66;1.52e-07;5!DOID:423;1.52e-07;5!DOID:0080000;1.52e-07;5!DOID:11722;1.52e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.57e-09,14;DOID:17,1.16e-07,5;DOID:450,1.16e-07,5;DOID:66,1.16e-07,5;DOID:423,1.16e-07,5;DOID:0080000,1.16e-07,5;DOID:11722,1.16e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.74e-14!79;UBERON:0007798!4.74e-14!79;UBERON:0004290!1.63e-12!70;UBERON:0004872!6.41e-12!84;UBERON:0000914!7.03e-12!83;UBERON:0002329!7.03e-12!83;UBERON:0003077!7.03e-12!83;UBERON:0003059!7.03e-12!83;UBERON:0007282!7.03e-12!83;UBERON:0009618!7.03e-12!83;UBERON:0007285!7.03e-12!83;UBERON:0004535!7.62e-12!110;UBERON:0001134!7.84e-12!61;UBERON:0002036!7.84e-12!61;UBERON:0003082!7.84e-12!61;UBERON:0000055!8.64e-12!69;UBERON:0000490!1.80e-11!138;UBERON:0001637!3.35e-11!42;UBERON:0003509!3.35e-11!42;UBERON:0004572!3.35e-11!42;UBERON:0003914!5.57e-11!118;UBERON:0002385!5.86e-11!63;UBERON:0001015!5.86e-11!63;UBERON:0000383!5.86e-11!63;UBERON:0001009!6.03e-11!113;UBERON:0001981!1.42e-10!60;UBERON:0007500!1.42e-10!60;UBERON:0004537!1.42e-10!60;UBERON:0006965!1.42e-10!60;UBERON:0000486!1.95e-10!82;UBERON:0005256!9.19e-10!143;UBERON:0004573!4.00e-07!33;UBERON:0004571!4.00e-07!33;UBERON:0002100!4.55e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;2.12e-08;7!UBERON:0009142;2.12e-08;7!UBERON:0001637;3.11e-08;42!UBERON:0003509;3.11e-08;42!UBERON:0004572;3.11e-08;42!UBERON:0004573;4.56e-08;33!UBERON:0004571;4.56e-08;33!UBERON:0003422;1.55e-07;6!UBERON:0000947;1.84e-07;21!UBERON:0010191;1.84e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.90e-12,42;UBERON:0003509,7.90e-12,42;UBERON:0004572,7.90e-12,42;UBERON:0004872,5.72e-11,83;UBERON:0003914,2.85e-10,117;UBERON:0000055,3.43e-09,68;UBERON:0007500,5.72e-09,59;UBERON:0001981,5.72e-09,59;UBERON:0004537,5.72e-09,59;UBERON:0006965,5.72e-09,59;UBERON:0004535,1.18e-08,109;UBERON:0002049,1.60e-08,78;UBERON:0007798,1.60e-08,78;UBERON:0007503,1.80e-08,78;UBERON:0004573,2.56e-08,33;UBERON:0004571,2.56e-08,33;UBERON:0001009,3.66e-08,112;UBERON:0001134,6.45e-08,62;UBERON:0002036,6.45e-08,62;UBERON:0003082,6.45e-08,62;UBERON:0003422,6.78e-08,6;UBERON:0002385,1.82e-07,64;UBERON:0001015,1.82e-07,64;UBERON:0000383,1.82e-07,64;UBERON:0000947,3.13e-07,21;UBERON:0010191,3.13e-07,21;UBERON:0007524,3.57e-07,73;UBERON:0002329,6.65e-07,71;UBERON:0003059,6.65e-07,71;UBERON:0007282,6.65e-07,71;UBERON:0004290,6.65e-07,71;UBERON:0009618,6.65e-07,71;UBERON:0003104,8.77e-07,160;UBERON:0009142,8.77e-07,160 | |||
|phase1_expression=0.726713517082227,2.35510576280081,0.422863212287913,3.00219895059391,0.893922188854576,0.872338524100369,0,0.631719873426831,0.783556884599516,0.491467873003018,0,0,0,0.495065411840187,0,3.36162573225888,3.01347264011988,4.38186054232424,1.46379839637152,0.492484232307152,2.04000691244253,0,0.572471974262113,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,3.35350429851818,0.895037932904712,0.361439152384566,2.50668955317945,2.02785126545153,0,2.43317435151318,0.0945348171640679,1.99556457716308,0.351339142772504,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,1.13061588384802,2.09749718104953,4.95212475492121,0.626984899610432,0.258416759169329,0.35576626268671,1.00416183829401,0.805658634218294,0,2.4406205754817,0.735326160691737,4.86085168729056,0.357198913136319,0.22452937262617,0.225222960966644,0,0,1.09921046358244,0,0,0.436094052142534,3.97577561356255,0.886413581652058,1.05927344650575,4.01571269048339,1.41867352879343,0,3.20246987189115,5.42668606517752,0,0.808264032418128,0.490385709340376,0.908144565869588,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.352303495931295,0.323745888736263,0.280901613404497,0,0.737005903870608,0,0,2.71993622206413,1.82032272387605,2.87447256726495,0,0.250237039743928,0.277064115484183,0,4.59731693698529,0.45071417671979,0.794025282120147,3.40840307808838,2.98980344345994,2.11931901159562,4.80145753735044,1.44273540933814,4.12224864073007,2.60563598864226,1.35021065793013,0.487185025805993,2.52433774244115,0.552299391853796,0.323292113637624,4.26011511019937,0.906768884048762,0.508681776931463,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,5.14592750554308,0,0.464367928031979,0,0.354920400119532,0.674338760312407,0.482022059766964,0.330881918197182,0.435758888184812,0.237270619111097,0.674156540800822,0.196221465125346,0,0.738155454624648,0,0.4115740113314,2.94017422771084,0,0,0,0,0,2.05881372358231,0.109750285408626,0,0,0,0,2.07986957055916,1.44331342025273,0.34779121492523,0.70445216541493,0,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,1.74384027533312,0.95339771567235,1.93907573636667,0,0.845302752556,2.39344304926383,4.16029747645464,0.514414748524284,0,0.266422179016099,2.14466990487221,1.62786481617433,1.64648067356154,0.325736184293735,2.84313558994037,1.58390374586686,0.904318131178758,0,1.19967589418468,0,0,0,3.11512312139057,2.29723871668228,0,0.434343920002738,2.05476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0,0.542530047399471,7.69492187663986,24.4447714652112,5.04647728108591,3.5142424497814,0,0,0,0,1.29058417979192,0.868836144680828,0.195801157462741,0,0,0,0,0,0,0,1.73675465473144,0.920771839728375,3.64858122762996,1.53766979106841,1.53512174720011,2.73451665944133,1.48418066444991,4.47208112027701,1.77561725313127,0.328508624055237,2.59627214591811,2.09178681227927,0,1.40354529212299,0.0920809889358963,1.83703117063371,0.546273504020151,0.262248829918848,0.451199612907412,0.770153371044148,0,0,0.211103257785751,0,1.87103075804167,1.72732732881711,3.08454505380579,0.541892875087706,2.00675909541941,0,0,1.56712328305525,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0,0.183138929636687,0,0,0,1.6068392984416,0,1.07834031980251,0.307007349452259,0.413509717453592,0.537101224341368,0.580066775656914,0.596586391912706,0.712256285173899,0.826424576804891,0.192190067365106,0,0.10115778085555,2.32422774648643,11.9628691795643,0,1.23213432070436,0,0,0,0.286249773483982,0.372158369359667,0,0.953150969619124,0.255897791311334,0.42793898803392,0.318203247925937,3.13979456079692,0.899362287916574,1.37268514868027,0.589062011728432,0.606547444719948,0,0,0.48763373908959,2.68084838594413,6.33900880540533,1.36499911407986,2.68670320712054,2.26016233240486,1.65409603063837,1.32687795048244,0,1.15755106853338,0,2.02910376962704,0.92947049429925,1.40847801266121,0.573645408816206,1.3754865741837,2.1400263088875,0.709522128141196,1.47775344708365,1.31717957183961,0.75894634753143,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,5.59871257791253,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,2.53197677433632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0,2.92376255201748,0.0967563312890851,0.219267951258557,0.164230914106418,0.0969890164884194,0,0.225980740780532,0.411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| |||
|short_description=p@chr8:23159569..23159589,- | |||
}} |
Revision as of 21:10, 22 January 2014
Short description: | p@chr8:23159569..23159589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23159569..23159589, - |
Coexpression cluster: | C608_Smooth_mesenchymal_hepatic_Olfactory_Ewing_basal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.29e-14 | 76 |
mesodermal cell | 2.14e-10 | 121 |
preadipocyte | 4.42e-10 | 12 |
smooth muscle cell | 1.01e-08 | 43 |
smooth muscle myoblast | 1.01e-08 | 43 |
vascular associated smooth muscle cell | 1.12e-08 | 32 |
multi fate stem cell | 1.83e-08 | 427 |
muscle precursor cell | 3.68e-08 | 58 |
myoblast | 3.68e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.68e-08 | 58 |
muscle cell | 4.67e-08 | 55 |
somatic stem cell | 5.08e-08 | 433 |
mesenchymal stem cell of umbilical cord | 6.78e-08 | 6 |
stem cell | 1.87e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
artery | 7.90e-12 | 42 |
arterial blood vessel | 7.90e-12 | 42 |
arterial system | 7.90e-12 | 42 |
splanchnic layer of lateral plate mesoderm | 5.72e-11 | 83 |
epithelial tube | 2.85e-10 | 117 |
vessel | 3.43e-09 | 68 |
epithelial tube open at both ends | 5.72e-09 | 59 |
blood vessel | 5.72e-09 | 59 |
blood vasculature | 5.72e-09 | 59 |
vascular cord | 5.72e-09 | 59 |
cardiovascular system | 1.18e-08 | 109 |
vasculature | 1.60e-08 | 78 |
vascular system | 1.60e-08 | 78 |
epithelial vesicle | 1.80e-08 | 78 |
systemic artery | 2.56e-08 | 33 |
systemic arterial system | 2.56e-08 | 33 |
circulatory system | 3.66e-08 | 112 |
skeletal muscle tissue | 6.45e-08 | 62 |
striated muscle tissue | 6.45e-08 | 62 |
myotome | 6.45e-08 | 62 |
mesenchyme of umbilical cord | 6.78e-08 | 6 |
muscle tissue | 1.82e-07 | 64 |
musculature | 1.82e-07 | 64 |
musculature of body | 1.82e-07 | 64 |
aorta | 3.13e-07 | 21 |
aortic system | 3.13e-07 | 21 |
dense mesenchyme tissue | 3.57e-07 | 73 |
somite | 6.65e-07 | 71 |
presomitic mesoderm | 6.65e-07 | 71 |
presumptive segmental plate | 6.65e-07 | 71 |
dermomyotome | 6.65e-07 | 71 |
trunk paraxial mesoderm | 6.65e-07 | 71 |
mesenchyme | 8.77e-07 | 160 |
entire embryonic mesenchyme | 8.77e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.57e-09 | 14 |
musculoskeletal system disease | 1.16e-07 | 5 |
myotonic disease | 1.16e-07 | 5 |
muscle tissue disease | 1.16e-07 | 5 |
myopathy | 1.16e-07 | 5 |
muscular disease | 1.16e-07 | 5 |
myotonic dystrophy | 1.16e-07 | 5 |