FFCP PHASE1:Hg19::chr9:139095116..139095139,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_at_chr9:139095116..139095139,+ | |||
|id=chr9:139095116..139095139,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.03e-20!2;CL:0000312!7.72e-09!5;CL:0002319!9.22e-09!25;CL:0000240!1.67e-07!6;CL:0000311!1.67e-07!6;CL:0000079!1.67e-07!6;CL:0000237!1.67e-07!6;CL:0000036!1.67e-07!6;CL:0000357!1.67e-07!6;CL:0000114!1.67e-07!6;CL:0000540!4.44e-07!6;CL:0000031!4.44e-07!6;CL:0000404!4.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.88e-50;2!CL:0000242;1.88e-50;2!CL:0000312;6.65e-21;5!CL:0000240;1.33e-17;6!CL:0000311;1.33e-17;6!CL:0000079;1.33e-17;6!CL:0000237;1.33e-17;6!CL:0000095;1.84e-12;17!CL:0000362;4.42e-12;9!CL:0002319;5.74e-09;25!CL:0002159;4.19e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.88e-50,2;CL:0000312,6.65e-21,5;CL:0000240,1.33e-17,6;CL:0000311,1.33e-17,6;CL:0000079,1.33e-17,6;CL:0000237,1.33e-17,6;CL:0000036,1.33e-17,6;CL:0000357,1.33e-17,6;CL:0000114,1.33e-17,6;CL:0000095,1.84e-12,17;CL:0000123,1.84e-12,17;CL:0000362,4.42e-12,9;CL:0002319,5.74e-09,25;CL:0002159,4.19e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000357;1.33e-17;6!CL:0000114;1.33e-17;6!UBERON:0003056;1.54e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!2.07e-39!4;UBERON:0010133!2.07e-39!4;UBERON:0001894!1.13e-22!7;UBERON:0006222!1.13e-22!7;UBERON:0001905!8.49e-21!2;UBERON:0002757!8.49e-21!2;UBERON:0010134!8.49e-21!2;UBERON:0002784!8.49e-21!2;UBERON:0005408!8.49e-21!2;UBERON:0001899!8.49e-21!2;UBERON:0000007!1.86e-20!2;UBERON:0001017!7.30e-10!82;UBERON:0002368!1.39e-09!35;UBERON:0005743!2.39e-09!86;UBERON:0000073!2.41e-08!94;UBERON:0001016!2.41e-08!94;UBERON:0000949!2.39e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.38e-98;4!UBERON:0010133;1.38e-98;4!UBERON:0001894;1.06e-56;7!UBERON:0001905;1.14e-50;2!UBERON:0002757;1.14e-50;2!UBERON:0010134;1.14e-50;2!UBERON:0005408;1.14e-50;2!UBERON:0001899;1.14e-50;2!UBERON:0000007;8.50e-50;2!UBERON:0002784;5.94e-26;4!UBERON:0002368;6.52e-11;33!UBERON:0000949;1.10e-07;43!UBERON:0001003;1.27e-07;15!UBERON:0007376;1.27e-07;15!UBERON:0002780;1.67e-07;41!UBERON:0001890;1.67e-07;41!UBERON:0000955;1.91e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,1.38e-98,4;UBERON:0010133,1.38e-98,4;UBERON:0001894,1.06e-56,7;UBERON:0006222,1.06e-56,7;UBERON:0001905,1.14e-50,2;UBERON:0002757,1.14e-50,2;UBERON:0010134,1.14e-50,2;UBERON:0005408,1.14e-50,2;UBERON:0001899,1.14e-50,2;UBERON:0000007,8.50e-50,2;UBERON:0002784,5.94e-26,4;UBERON:0002368,8.37e-12,35;UBERON:0010371,1.31e-11,104;UBERON:0003056,3.00e-10,61;UBERON:0002780,6.58e-10,41;UBERON:0001890,6.58e-10,41;UBERON:0003080,6.58e-10,41;UBERON:0006240,6.58e-10,41;UBERON:0000949,2.83e-09,45;UBERON:0000955,4.22e-09,68;UBERON:0006238,4.22e-09,68;UBERON:0000073,8.61e-08,53;UBERON:0002616,8.61e-08,53;UBERON:0001017,1.06e-07,81;UBERON:0003075,1.06e-07,82;UBERON:0007284,1.06e-07,82;UBERON:0001003,1.27e-07,15;UBERON:0007376,1.27e-07,15;UBERON:0007383,1.27e-07,15;UBERON:0001049,2.12e-07,56;UBERON:0005068,2.12e-07,56;UBERON:0006241,2.12e-07,56;UBERON:0007135,2.12e-07,56;UBERON:0002346,2.36e-07,86;UBERON:0002530,3.68e-07,59;UBERON:0004121,5.65e-07,171;UBERON:0000924,5.65e-07,171;UBERON:0006601,5.65e-07,171;UBERON:0001016,5.81e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0.520874984799877,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1133773625927,9.70970891692529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,12.8568440610789,37.3274931662895,2.42786241694653,7.96817669729542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00451724584361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:139095116..139095139,+ | |||
}} |
Revision as of 04:06, 23 January 2014
Short description: | p@chr9:139095116..139095139, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:139095116..139095139, + |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.88e-50 | 2 |
keratinocyte | 6.65e-21 | 5 |
stratified squamous epithelial cell | 1.33e-17 | 6 |
keratin accumulating cell | 1.33e-17 | 6 |
stratified epithelial cell | 1.33e-17 | 6 |
keratinizing barrier epithelial cell | 1.33e-17 | 6 |
epithelial fate stem cell | 1.33e-17 | 6 |
stratified epithelial stem cell | 1.33e-17 | 6 |
surface ectodermal cell | 1.33e-17 | 6 |
neuron associated cell | 1.84e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 1.84e-12 | 17 |
epidermal cell | 4.42e-12 | 9 |
neural cell | 5.74e-09 | 25 |
general ecto-epithelial cell | 4.19e-08 | 14 |